Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 1.6e-119 433.0 248 100.0
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 2.9e-113 412.1 252 92.1
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 4.5e-90 335.1 254 78.7
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 1.2e-77 293.9 294 66.0
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 2.0e-69 266.5 172 81.4
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 8.1e-63 244.6 172 80.2
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 1.1e-59 234.2 172 73.8
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 3.1e-46 189.5 178 64.0
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 4.0e-46 189.1 173 62.4
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 1.9e-43 180.3 181 59.1
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 5.4e-43 178.7 146 61.0
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 1.2e-42 177.6 146 61.0
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 4.3e-40 169.1 172 54.1
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 5.6e-40 168.7 182 55.5
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 1.3e-39 167.5 184 53.8
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 2.8e-39 166.4 178 53.9
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 2.8e-39 166.4 178 51.7
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 6.2e-39 165.2 115 68.7
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 3.1e-38 162.9 169 56.8
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 3.1e-38 162.9 132 65.2
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 3.1e-38 162.9 132 65.2
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 9.0e-38 161.4 176 55.7
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 2.6e-37 159.8 137 59.9
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 4.5e-37 159.1 190 44.7
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 9.9e-37 157.9 119 66.4
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 1.7e-36 157.1 172 48.8
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 2.9e-36 156.4 132 59.1
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 1.1e-35 154.5 131 55.0
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 1.4e-35 154.1 174 52.3
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 4.2e-35 152.5 174 47.1
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 7.1e-35 151.8 134 56.0
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 1.2e-34 151.0 173 46.2
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 1.6e-34 150.6 174 52.3
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 4.6e-34 149.1 127 59.1
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 6.0e-34 148.7 113 66.4
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 7.9e-34 148.3 193 44.6
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 1.0e-33 147.9 171 49.1
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 1.3e-33 147.5 125 60.8
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 1.3e-33 147.5 174 47.7
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 1.8e-33 147.1 177 46.3
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 3.0e-33 146.4 175 48.0
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 3.0e-33 146.4 171 50.3
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 3.0e-33 146.4 171 50.3
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 3.0e-33 146.4 171 50.3
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 3.9e-33 146.0 175 52.6
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 2.5e-32 143.3 190 47.9
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 2.5e-32 143.3 174 50.0
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 2.5e-32 143.3 198 49.0
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 3.3e-32 142.9 171 48.5
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 3.3e-32 142.9 171 48.5
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 4.3e-32 142.5 175 50.3
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 5.6e-32 142.1 175 50.3
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 9.6e-32 141.4 175 48.6
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 4.8e-31 139.0 169 47.3
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 6.2e-31 138.7 118 58.5
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 1.1e-30 137.9 163 44.2
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 4.0e-30 136.0 98 67.3
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 5.3e-30 135.6 139 51.1
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 6.9e-30 135.2 135 48.1
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 9.0e-30 134.8 176 50.6
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 9.0e-30 134.8 175 46.9
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 1.5e-29 134.0 176 50.6
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 1.5e-29 134.0 193 45.1
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 4.5e-29 132.5 127 55.1
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 5.8e-29 132.1 174 47.1
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 5.8e-29 132.1 173 50.9
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 7.6e-29 131.7 117 56.4
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 1.7e-28 130.6 176 44.3
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 2.9e-28 129.8 173 46.8
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 8.4e-28 128.3 191 41.4
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 1.9e-27 127.1 107 59.8
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 2.5e-27 126.7 120 53.3
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 3.2e-27 126.3 112 57.1
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 5.5e-27 125.6 113 59.3
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 5.5e-27 125.6 190 40.0
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 9.3e-27 124.8 169 45.0
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 1.2e-26 124.4 177 44.1
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 1.6e-26 124.0 113 57.5
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 7.9e-26 121.7 113 50.4
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 7.9e-26 121.7 134 49.3
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 1.8e-25 120.6 171 43.3
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 1.8e-25 120.6 143 46.9
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 1.8e-25 120.6 172 44.2
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 1.8e-25 120.6 172 44.2
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 2.3e-25 120.2 177 43.5
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 3.0e-25 119.8 105 56.2
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 6.7e-25 118.6 103 54.4
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 8.7e-25 118.2 111 53.2
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 9.7e-24 114.8 106 52.8
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 2.2e-23 113.6 106 52.8
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 3.7e-23 112.8 109 50.5
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 8.2e-23 111.7 84 66.7
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 5.3e-22 109.0 113 46.0
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 2.0e-21 107.1 117 47.9
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 1.0e-20 104.8 126 46.0
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 3.8e-20 102.8 115 47.0
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 3.6e-18 96.3 119 48.7
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 2.3e-17 93.6 134 35.1
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 5.1e-17 92.4 103 48.5
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 1.4e-14 84.3 79 54.4
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 7.7e-13 78.6 75 73.3
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 1.1e-11 74.7 69 75.4
Oeu051834.1 Olea europaea HOM05D006774 ORTHO05D008411 1.9e-11 73.9 79 72.2
CSS0005750 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.5e-11 73.6 74 74.3
vmacro05012 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 1.2e-10 71.2 81 66.7
RhsimUnG0226800 Rhododendron simsii HOM05D006774 ORTHO05D008411 2.7e-10 70.1 82 64.6
vmacro23280 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 2.7e-10 70.1 81 65.4
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 3.3e-08 63.2 120 32.5
SEGI_31760 Sequoiadendron giganteum HOM05D006774 ORTHO05D008411 3.7e-07 59.7 71 69.0
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 1.1e-06 58.2 119 35.3
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 1.8e-06 57.4 73 54.8
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 4.1e-06 56.2 71 53.5


User provided reference genes

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