Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 2.4e-93 345.5 178 100.0
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 5.8e-87 324.3 179 92.7
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 8.6e-83 310.5 178 87.1
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 2.5e-82 308.9 174 87.9
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 3.6e-81 305.1 179 86.6
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 1.2e-79 300.1 176 85.2
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.9e-77 292.7 174 86.2
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 2.6e-71 272.3 169 81.1
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 4.4e-71 271.6 173 77.5
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 5.8e-71 271.2 169 78.1
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 9.9e-71 270.4 165 80.6
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 1.3e-70 270.0 166 77.1
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 4.9e-70 268.1 168 79.8
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 6.4e-70 267.7 163 81.6
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.1e-69 266.9 167 79.0
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.4e-69 266.5 169 78.7
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.9e-69 266.2 167 79.6
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 1.9e-69 266.2 173 75.7
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.4e-69 265.8 167 79.6
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 4.1e-69 265.0 169 79.3
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 5.4e-69 264.6 180 75.0
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 7.1e-69 264.2 170 77.1
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 1.2e-68 263.5 170 75.9
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 1.2e-68 263.5 168 78.0
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 1.6e-68 263.1 156 84.0
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 2.1e-68 262.7 170 77.1
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 2.7e-68 262.3 170 78.2
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 2.7e-68 262.3 169 76.9
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 6.0e-68 261.2 169 77.5
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 6.0e-68 261.2 172 73.3
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 7.8e-68 260.8 158 78.5
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 1.0e-67 260.4 174 74.1
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 1.7e-67 259.6 161 78.3
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 1.7e-67 259.6 173 74.6
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 3.0e-67 258.8 161 77.6
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 3.0e-67 258.8 169 75.1
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 3.0e-67 258.8 175 74.9
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 6.6e-67 257.7 161 77.6
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 8.6e-67 257.3 157 82.2
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 8.6e-67 257.3 170 74.1
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 8.6e-67 257.3 177 72.9
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 8.6e-67 257.3 171 74.3
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 1.1e-66 256.9 159 77.4
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.1e-66 256.9 168 74.4
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.5e-66 256.5 168 76.2
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 1.9e-66 256.1 163 80.4
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.9e-66 256.1 160 78.1
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 3.3e-66 255.4 174 72.4
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 5.6e-66 254.6 179 72.6
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.2e-65 253.4 158 80.4
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 1.6e-65 253.1 164 73.8
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 1.6e-65 253.1 160 76.2
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 1.6e-65 253.1 161 75.8
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 2.1e-65 252.7 170 72.9
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 2.8e-65 252.3 174 76.4
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 4.7e-65 251.5 165 75.2
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 6.2e-65 251.1 178 69.1
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 6.2e-65 251.1 172 70.9
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 6.2e-65 251.1 163 77.3
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 8.1e-65 250.8 161 75.2
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 8.1e-65 250.8 167 73.7
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 8.1e-65 250.8 166 77.1
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 1.4e-64 250.0 172 70.3
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 3.1e-64 248.8 177 71.2
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 4.0e-64 248.4 171 71.9
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 4.0e-64 248.4 171 71.3
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 6.9e-64 247.7 165 74.5
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 1.2e-63 246.9 165 72.7
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 1.2e-63 246.9 165 72.7
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 1.2e-63 246.9 168 73.8
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 1.2e-63 246.9 165 73.3
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 1.2e-63 246.9 174 73.0
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 2.0e-63 246.1 162 75.9
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 3.4e-63 245.4 172 72.1
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 4.4e-63 245.0 171 70.8
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 5.8e-63 244.6 167 72.5
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 7.6e-63 244.2 173 69.4
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 9.9e-63 243.8 171 70.2
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 9.9e-63 243.8 155 77.4
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 9.9e-63 243.8 167 73.7
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 1.7e-62 243.0 204 62.7
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 3.8e-62 241.9 166 71.1
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 4.9e-62 241.5 178 68.5
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 1.1e-61 240.4 170 70.0
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.4e-61 240.0 161 71.4
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 2.4e-61 239.2 156 76.9
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 2.4e-61 239.2 166 70.5
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 4.2e-61 238.4 155 76.8
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 5.4e-61 238.0 182 65.9
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 7.1e-61 237.7 178 68.5
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 6.0e-60 234.6 167 70.1
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 6.0e-60 234.6 163 73.0
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 6.0e-60 234.6 167 70.1
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 1.0e-59 233.8 164 72.0
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 1.3e-59 233.4 167 70.7
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 2.3e-59 232.6 158 72.2
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 3.9e-59 231.9 166 70.5
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 1.5e-58 229.9 156 71.8
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 1.9e-58 229.6 224 58.9
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 2.5e-58 229.2 167 67.7
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 4.3e-58 228.4 161 68.9
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 7.3e-58 227.6 163 69.3
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 2.1e-57 226.1 157 70.1
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 3.6e-57 225.3 178 66.9
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 3.1e-56 222.2 175 68.0
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.5e-55 219.9 198 60.1
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 2.6e-55 219.2 152 71.7
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 4.5e-55 218.4 167 65.9
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 4.5e-55 218.4 136 80.1
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 5.8e-55 218.0 154 69.5
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 2.9e-54 215.7 171 67.8
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 4.2e-53 211.8 174 60.9
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 5.4e-53 211.5 114 96.5
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.2e-52 210.3 183 63.9
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.6e-52 209.9 168 62.5
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 6.0e-52 208.0 157 64.3
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 8.7e-51 204.1 146 65.8
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 5.6e-50 201.4 135 70.4
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 5.6e-50 201.4 154 62.3
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 4.8e-49 198.4 200 54.0
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 6.2e-49 198.0 176 60.8
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 2.4e-48 196.1 149 65.1
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 6.9e-48 194.5 172 59.3
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 6.9e-48 194.5 165 60.0
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 1.7e-46 189.9 129 70.5
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 6.4e-46 188.0 120 73.3
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 7.1e-45 184.5 138 63.8
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 1.6e-44 183.3 159 58.5
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 4.3e-42 175.3 143 66.4
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 5.6e-42 174.9 120 70.8
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.3e-41 173.7 112 80.4
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 3.4e-39 165.6 160 55.6
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 7.6e-39 164.5 158 57.6
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 1.0e-38 164.1 111 73.9
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 4.2e-37 158.7 100 84.0
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 4.6e-36 155.2 172 50.6
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 1.3e-35 153.7 115 68.7
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 1.9e-34 149.8 151 49.7
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 3.3e-34 149.1 98 68.4
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 2.4e-32 142.9 111 67.6
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 2.5e-29 132.9 88 80.7
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 6.1e-28 128.3 110 60.9
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 8.8e-27 124.4 154 45.5
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.2e-25 119.8 84 66.7
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 4.1e-24 115.5 60 90.0
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 1.7e-22 110.2 96 64.6
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 1.7e-22 110.2 175 36.0
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 4.2e-21 105.5 67 71.6
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.2e-20 104.0 63 88.9
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 5.1e-19 98.6 69 71.0
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 2.2e-17 93.2 111 55.9
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 2.8e-17 92.8 59 76.3
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 2.8e-17 92.8 59 76.3
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 3.1e-16 89.4 157 36.9
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 1.2e-15 87.4 62 71.0
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 8.5e-14 81.3 210 28.1
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 3.6e-12 75.9 45 80.0
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 3.6e-12 75.9 156 32.7
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 4.8e-09 65.5 48 62.5


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