Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000132g0030 Nicotiana tabacum HOM05D003756 ORTHO05D004304 7.2e-40 166.8 83 100.0
Phvul.001G190200 Phaseolus vulgaris HOM05D003756 ORTHO05D004304 1.6e-23 112.5 81 69.1
THA.LOC104799762 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 4.7e-23 110.9 83 68.7
Eucgr.K02043 Eucalyptus grandis HOM05D003756 ORTHO05D004304 1.4e-22 109.4 83 67.5
THA.LOC104804928 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 1.8e-22 109.0 83 67.5
Duzib128G1348 Durio zibethinus HOM05D003756 ORTHO05D004304 2.3e-22 108.6 84 70.2
CAN.G1039.16 Capsicum annuum HOM05D003756 ORTHO05D004304 3.0e-22 108.2 83 65.1
Lj6g0015332 Lotus japonicus HOM05D003756 ORTHO05D004304 3.0e-22 108.2 83 68.7
ClCG04G010050 Citrullus lanatus HOM05D003756 ORTHO05D004304 5.2e-22 107.5 83 66.3
Duzib106G1642 Durio zibethinus HOM05D003756 ORTHO05D004304 5.2e-22 107.5 84 69.0
Gohir.D01G127900 Gossypium hirsutum HOM05D003756 ORTHO05D004304 5.2e-22 107.5 84 69.0
Gorai.002G158500 Gossypium raimondii HOM05D003756 ORTHO05D004304 5.2e-22 107.5 84 69.0
Glyma.03G195700 Glycine max HOM05D003756 ORTHO05D004304 6.7e-22 107.1 81 66.7
Ca_09004_v3 Cicer arietinum L. HOM05D003756 ORTHO05D004304 8.8e-22 106.7 83 65.1
Sc20g0006280 Simmondsia chinensis HOM05D003756 ORTHO05D004304 8.8e-22 106.7 83 68.7
Gohir.A01G138200 Gossypium hirsutum HOM05D003756 ORTHO05D004304 1.1e-21 106.3 84 67.9
Thecc.05G088800 Theobroma cacao HOM05D003756 ORTHO05D004304 1.1e-21 106.3 84 69.0
Glyma.13G153500 Glycine max HOM05D003756 ORTHO05D004304 1.5e-21 105.9 78 67.9
Manes.08G025100 Manihot esculenta HOM05D003756 ORTHO05D004304 1.5e-21 105.9 83 67.5
PGR142G3329 Punica granatum HOM05D003756 ORTHO05D004304 1.5e-21 105.9 83 65.1
Gohir.A09G139300 Gossypium hirsutum HOM05D003756 ORTHO05D004304 2.0e-21 105.5 84 67.9
Gohir.D09G135300 Gossypium hirsutum HOM05D003756 ORTHO05D004304 2.0e-21 105.5 84 67.9
Gorai.006G155200 Gossypium raimondii HOM05D003756 ORTHO05D004304 2.0e-21 105.5 84 67.9
Potri.009G149300 Populus trichocarpa HOM05D003756 ORTHO05D004304 2.0e-21 105.5 83 66.3
Lalb_Chr20g0111721 Lupinus albus HOM05D003756 ORTHO05D004304 2.6e-21 105.1 85 64.7
arahy.Tifrunner.gnm1.ann1.IH6TUL Arachis hypogaea HOM05D003756 ORTHO05D004304 3.3e-21 104.8 83 65.1
ClCG10G018980 Citrullus lanatus HOM05D003756 ORTHO05D004304 3.3e-21 104.8 83 66.3
Psat3g033400 Pisum sativum HOM05D003756 ORTHO05D004304 3.3e-21 104.8 83 65.1
Sabra04G0129400 Salix brachista HOM05D003756 ORTHO05D004304 3.3e-21 104.8 81 65.4
CANSAT80G0977 Cannabis sativa HOM05D003756 ORTHO05D004304 4.4e-21 104.4 83 65.1
ClCG04G010070 Citrullus lanatus HOM05D003756 ORTHO05D004304 4.4e-21 104.4 83 65.1
Potri.004G188700 Populus trichocarpa HOM05D003756 ORTHO05D004304 4.4e-21 104.4 81 65.4
arahy.Tifrunner.gnm1.ann1.N59HKK Arachis hypogaea HOM05D003756 ORTHO05D004304 5.7e-21 104.0 95 57.9
FAN18G4123 Fragaria x ananassa HOM05D003756 ORTHO05D004304 5.7e-21 104.0 83 65.1
Medtr7g104570 Medicago truncatula HOM05D003756 ORTHO05D004304 5.7e-21 104.0 83 65.1
Atru.chr8.1539 Acer truncatum HOM05D003756 ORTHO05D004304 7.5e-21 103.6 83 66.3
MELO3C009472.2 Cucumis melo HOM05D003756 ORTHO05D004304 7.5e-21 103.6 83 65.1
CsaV3_3G037270 Cucumis sativus L. HOM05D003756 ORTHO05D004304 7.5e-21 103.6 83 65.1
MD12G1036000 Malus domestica HOM05D003756 ORTHO05D004304 7.5e-21 103.6 83 66.3
Sed0019143 Sechium edule HOM05D003756 ORTHO05D004304 7.5e-21 103.6 81 64.2
Lalb_Chr25g0288331 Lupinus albus HOM05D003756 ORTHO05D004304 9.7e-21 103.2 84 65.5
Cpa.g.sc5.21 Carica papaya HOM05D003756 ORTHO05D004304 1.3e-20 102.8 83 63.9
Peaxi162Scf00003g00522 Petunia axillaris HOM05D003756 ORTHO05D004304 1.3e-20 102.8 81 67.9
HPP92_026089 Vanilla planifolia HOM05D003756 ORTHO05D004304 1.3e-20 102.8 81 64.2
FvH4_5g38790 Fragaria vesca HOM05D003756 ORTHO05D004304 1.7e-20 102.4 83 65.1
FAN02G3109 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.7e-20 102.4 78 69.2
FAN05G1127 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.7e-20 102.4 78 69.2
FAN05G3155 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.7e-20 102.4 78 69.2
FAN09G2235 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.7e-20 102.4 78 69.2
MD14G1022700 Malus domestica HOM05D003756 ORTHO05D004304 1.7e-20 102.4 83 66.3
Nitab4.5_0000963g0100 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.7e-20 102.4 56 85.7
THA.LOC104823490 Tarenaya hassleriana HOM05D003756 ORTHO05D004304 1.7e-20 102.4 83 62.7
TAR633G1678 Trochodendron aralioides HOM05D003756 ORTHO05D004304 1.7e-20 102.4 101 54.5
GSVIVG01033840001 Vitis vinifera HOM05D003756 ORTHO05D004304 1.7e-20 102.4 81 64.2
Prupe.7G110400 Prunus persica HOM05D003756 ORTHO05D004304 2.2e-20 102.1 83 65.1
RcHm_v2.0_Chr3g0473621 Rosa chinensis HOM05D003756 ORTHO05D004304 2.2e-20 102.1 83 65.1
Sed0014276 Sechium edule HOM05D003756 ORTHO05D004304 2.2e-20 102.1 83 65.1
TWI53G0293 Tripterygium wilfordii HOM05D003756 ORTHO05D004304 2.2e-20 102.1 84 63.1
CiPaw.10G009500 Carya illinoinensis HOM05D003756 ORTHO05D004304 2.8e-20 101.7 83 63.9
MELO3C024548.2 Cucumis melo HOM05D003756 ORTHO05D004304 2.8e-20 101.7 83 63.9
Gohir.A01G206400 Gossypium hirsutum HOM05D003756 ORTHO05D004304 2.8e-20 101.7 83 66.3
Gorai.002G240000 Gossypium raimondii HOM05D003756 ORTHO05D004304 2.8e-20 101.7 83 66.3
HanXRQChr01g0024081 Helianthus annuus HOM05D003756 ORTHO05D004304 2.8e-20 101.7 77 68.8
MD15G1359000 Malus domestica HOM05D003756 ORTHO05D004304 2.8e-20 101.7 83 66.3
Oeu002376.1 Olea europaea HOM05D003756 ORTHO05D004304 2.8e-20 101.7 81 64.2
Prupe.1G506800 Prunus persica HOM05D003756 ORTHO05D004304 2.8e-20 101.7 83 65.1
FvH4_6g18660 Fragaria vesca HOM05D003756 ORTHO05D004304 3.7e-20 101.3 78 67.9
FAN14G1823 Fragaria x ananassa HOM05D003756 ORTHO05D004304 3.7e-20 101.3 78 67.9
Atru.chr8.1542 Acer truncatum HOM05D003756 ORTHO05D004304 4.8e-20 100.9 83 63.9
Ah.15g090880 Amaranthus hybridus HOM05D003756 ORTHO05D004304 4.8e-20 100.9 83 62.7
AL5G33490 Arabidopsis lyrata HOM05D003756 ORTHO05D004304 4.8e-20 100.9 83 62.7
AT3G52730 Arabidopsis thaliana HOM05D003756 ORTHO05D004304 4.8e-20 100.9 83 62.7
Carub.0005s1918 Capsella rubella HOM05D003756 ORTHO05D004304 4.8e-20 100.9 83 62.7
CARHR162600 Cardamine hirsuta HOM05D003756 ORTHO05D004304 4.8e-20 100.9 83 62.7
unitig_747.g21944 Utricularia gibba HOM05D003756 ORTHO05D004304 4.8e-20 100.9 83 63.9
HPP92_025135 Vanilla planifolia HOM05D003756 ORTHO05D004304 4.8e-20 100.9 81 64.2
Aqoxy2G03946 Aquilegia oxysepala HOM05D003756 ORTHO05D004304 6.3e-20 100.5 81 65.4
CiPaw.09G013700 Carya illinoinensis HOM05D003756 ORTHO05D004304 8.2e-20 100.1 83 62.7
AUR62006180 Chenopodium quinoa HOM05D003756 ORTHO05D004304 8.2e-20 100.1 81 66.7
AUR62028527 Chenopodium quinoa HOM05D003756 ORTHO05D004304 8.2e-20 100.1 81 66.7
Cc01_g09260 Coffea canephora HOM05D003756 ORTHO05D004304 8.2e-20 100.1 76 67.1
Gohir.D01G195800 Gossypium hirsutum HOM05D003756 ORTHO05D004304 8.2e-20 100.1 83 65.1
Nitab4.5_0000755g0180 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.1e-19 99.8 79 65.8
CSS0028702 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 1.4e-19 99.4 81 61.7
CDE06G0646 Ceratophyllum demersum HOM05D003756 ORTHO05D004304 1.4e-19 99.4 83 62.7
FAN04G2492 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.4e-19 99.4 81 66.7
Nitab4.5_0001216g0110 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.8e-19 99.0 86 60.5
Solyc11g068400.2 Solanum lycopersicum HOM05D003756 ORTHO05D004304 1.8e-19 99.0 83 62.7
Sopen11g027120 Solanum pennellii HOM05D003756 ORTHO05D004304 1.8e-19 99.0 83 62.7
Nn6g34903 Nelumbo nucifera HOM05D003756 ORTHO05D004304 2.4e-19 98.6 83 62.7
QL07p038800 Quercus lobata HOM05D003756 ORTHO05D004304 2.4e-19 98.6 74 64.9
QL07p039050 Quercus lobata HOM05D003756 ORTHO05D004304 2.4e-19 98.6 74 64.9
TWI74G1420 Tripterygium wilfordii HOM05D003756 ORTHO05D004304 2.4e-19 98.6 84 63.1
Aa31LG5G21370 Aethionema arabicum HOM05D003756 ORTHO05D004304 3.1e-19 98.2 78 66.7
Thhalv10010889m.g Eutrema salsugineum HOM05D003756 ORTHO05D004304 3.1e-19 98.2 74 68.9
Lsat_1_v5_gn_1_59380 Lactuca sativa HOM05D003756 ORTHO05D004304 3.1e-19 98.2 75 65.3
MBI17_g08353_MAGBIO Magnolia biondii HOM05D003756 ORTHO05D004304 3.1e-19 98.2 77 67.5
HanXRQChr02g0054771 Helianthus annuus HOM05D003756 ORTHO05D004304 4.1e-19 97.8 81 65.4
Lsat_1_v5_gn_6_38741 Lactuca sativa HOM05D003756 ORTHO05D004304 4.1e-19 97.8 81 63.0
MD07G1149900 Malus domestica HOM05D003756 ORTHO05D004304 4.1e-19 97.8 83 61.4
ECA248G1642 Erigeron canadensis HOM05D003756 ORTHO05D004304 7.0e-19 97.1 77 64.9
TAR623G0741 Trochodendron aralioides HOM05D003756 ORTHO05D004304 7.0e-19 97.1 83 63.9
TAR636G3345 Trochodendron aralioides HOM05D003756 ORTHO05D004304 7.0e-19 97.1 81 60.5
CSS0017737 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 1.2e-18 96.3 81 61.7
CSS0036255 Camellia sinensis var. sinensis HOM05D003756 ORTHO05D004304 1.2e-18 96.3 81 61.7
HanXRQChr14g0451601 Helianthus annuus HOM05D003756 ORTHO05D004304 1.6e-18 95.9 75 65.3
Zm00001eb093400 Zea mays HOM05D003756 ORTHO05D004304 1.6e-18 95.9 73 64.4
Actinidia24215 Actinidia chinensis HOM05D003756 ORTHO05D004304 2.0e-18 95.5 81 63.0
A04p06750 Brassica napus HOM05D003756 ORTHO05D004304 2.0e-18 95.5 74 67.6
Cfa016605 Carpinus fangiana HOM05D003756 ORTHO05D004304 2.0e-18 95.5 78 64.1
Haze_19608 Corylus avellana HOM05D003756 ORTHO05D004304 2.0e-18 95.5 78 64.1
Rhsim13G0111400 Rhododendron simsii HOM05D003756 ORTHO05D004304 2.0e-18 95.5 89 56.2
BcaB02g07820 Brassica carinata HOM05D003756 ORTHO05D004304 2.7e-18 95.1 74 66.2
BcaC02g09226 Brassica carinata HOM05D003756 ORTHO05D004304 2.7e-18 95.1 74 66.2
C04p40240 Brassica napus HOM05D003756 ORTHO05D004304 2.7e-18 95.1 74 66.2
BolC4t25600H Brassica oleracea HOM05D003756 ORTHO05D004304 2.7e-18 95.1 74 66.2
BcaB02g08557 Brassica carinata HOM05D003756 ORTHO05D004304 3.5e-18 94.7 74 66.2
Sp5g09600 Schrenkiella parvula HOM05D003756 ORTHO05D004304 3.5e-18 94.7 74 66.2
SalBow5G5426 Salvia bowleyana HOM05D003756 ORTHO05D004304 4.5e-18 94.4 83 61.4
Actinidia35464 Actinidia chinensis HOM05D003756 ORTHO05D004304 5.9e-18 94.0 81 61.7
Zm00001eb196190 Zea mays HOM05D003756 ORTHO05D004304 5.9e-18 94.0 73 64.4
Glyma.19G194915 Glycine max HOM05D003756 ORTHO05D004304 7.7e-18 93.6 110 50.0
PGSC0003DMG400005923 Solanum tuberosum HOM05D003756 ORTHO05D004304 7.7e-18 93.6 76 67.1
ECA233G1974 Erigeron canadensis HOM05D003756 ORTHO05D004304 1.0e-17 93.2 76 65.8
Actinidia07248 Actinidia chinensis HOM05D003756 ORTHO05D004304 2.2e-17 92.0 81 60.5
Dinv42555 Davidia involucrata HOM05D003756 ORTHO05D004304 3.8e-17 91.3 75 61.3
RcHm_v2.0_Chr7g0240771 Rosa chinensis HOM05D003756 ORTHO05D004304 3.8e-17 91.3 83 60.2
SEGI_29748 Sequoiadendron giganteum HOM05D003756 ORTHO05D004304 3.8e-17 91.3 71 63.4
BcaB01g00346 Brassica carinata HOM05D003756 ORTHO05D004304 6.5e-17 90.5 71 66.2
BcaC07g39638 Brassica carinata HOM05D003756 ORTHO05D004304 6.5e-17 90.5 71 66.2
A09p45820 Brassica napus HOM05D003756 ORTHO05D004304 6.5e-17 90.5 71 66.2
C08p28010 Brassica napus HOM05D003756 ORTHO05D004304 6.5e-17 90.5 71 66.2
BolC8t50413H Brassica oleracea HOM05D003756 ORTHO05D004304 6.5e-17 90.5 71 66.2
BraA09t40043Z Brassica rapa HOM05D003756 ORTHO05D004304 6.5e-17 90.5 71 66.2
CAN.G1358.12 Capsicum annuum HOM05D003756 ORTHO05D004304 6.5e-17 90.5 78 61.5
CAN.G2235.1 Capsicum annuum HOM05D003756 ORTHO05D004304 6.5e-17 90.5 80 60.0
CAN.G919.30 Capsicum annuum HOM05D003756 ORTHO05D004304 8.5e-17 90.1 71 62.0
Os05g0400400 Oryza sativa ssp. japonica HOM05D003756 ORTHO05D004304 8.5e-17 90.1 71 63.4
Ah.08g210600 Amaranthus hybridus HOM05D001616 ORTHO05D003701 1.9e-16 89.0 107 49.5
Sabra09G0117900 Salix brachista HOM05D003756 ORTHO05D004304 4.2e-16 87.8 68 64.7
PSO384G4395 Papaver somniferum HOM05D003756 ORTHO05D004304 7.2e-16 87.0 73 63.0
TPR.G19525 Trifolium pratense HOM05D003756 ORTHO05D004304 7.2e-16 87.0 64 65.6
Duzib093G1183 Durio zibethinus HOM05D003756 ORTHO05D004304 9.4e-16 86.7 57 75.4
MD16G1126500 Malus domestica HOM05D003756 ORTHO05D004304 9.4e-16 86.7 73 63.0
Migut.D02449 Erythranthe guttata HOM05D003756 ORTHO05D004304 1.2e-15 86.3 77 59.7
Nitab4.5_0006996g0050 Nicotiana tabacum HOM05D003756 ORTHO05D004304 1.2e-15 86.3 56 73.2
PSO339G6416 Papaver somniferum HOM05D003756 ORTHO05D004304 1.2e-15 86.3 73 63.0
CsaV3_6G040700 Cucumis sativus L. HOM05D003756 ORTHO05D004304 1.6e-15 85.9 58 69.0
EL10Ac7g16918 Beta vulgaris HOM05D003756 ORTHO05D004304 6.1e-15 84.0 61 65.6
Oeu035551.2 Olea europaea HOM05D003756 ORTHO05D004304 6.1e-15 84.0 64 65.6
PGSC0003DMG400026342 Solanum tuberosum HOM05D003756 ORTHO05D004304 6.1e-15 84.0 56 69.6
Mapoly0074s0034 Marchantia polymorpha HOM05D003756 ORTHO05D004304 8.0e-15 83.6 78 55.1
Ciclev10013189m.g Citrus clementina HOM05D003756 ORTHO05D004304 1.0e-14 83.2 62 62.9
ECA238G2045 Erigeron canadensis HOM05D003756 ORTHO05D004304 1.0e-14 83.2 76 60.5
Hund19934 Selenicereus undatus HOM05D003756 ORTHO05D004304 1.0e-14 83.2 71 59.2
Actinidia37081 Actinidia chinensis HOM05D003756 ORTHO05D004304 1.4e-14 82.8 57 70.2
Rhsim01G0205100 Rhododendron simsii HOM05D003756 ORTHO05D004304 1.4e-14 82.8 124 41.1
Sc02g0000240 Simmondsia chinensis HOM05D003756 ORTHO05D004304 1.4e-14 82.8 56 69.6
Sp4g18470 Schrenkiella parvula HOM05D003756 ORTHO05D004304 2.3e-14 82.0 56 69.6
ATR0796G241 Amborella trichopoda HOM05D003756 ORTHO05D004304 3.0e-14 81.6 49 77.6
CAN.G28765.1 Capsicum annuum HOM05D003756 ORTHO05D004304 3.0e-14 81.6 79 58.2
SalBow6G3312 Salvia bowleyana HOM05D003756 ORTHO05D004304 3.0e-14 81.6 71 54.9
COL.COLO4_29737 Corchorus olitorius HOM05D003756 ORTHO05D004304 5.2e-14 80.9 56 67.9
Hma1.2p1_0084F.1_g043780 Hydrangea macrophylla HOM05D003756 ORTHO05D004304 1.2e-13 79.7 56 64.3
BraA04t16378Z Brassica rapa HOM05D003756 ORTHO05D004304 2.0e-13 79.0 47 76.6
Dinv29482 Davidia involucrata HOM05D003756 ORTHO05D004304 2.0e-13 79.0 56 67.9
Hma1.2p1_0578F.1_g182500 Hydrangea macrophylla HOM05D003756 ORTHO05D004304 4.4e-13 77.8 46 73.9
SEGI_32530 Sequoiadendron giganteum HOM05D003756 ORTHO05D004304 9.8e-13 76.6 50 70.0
Pp3c7_2560 Physcomitrium patens HOM05D003756 ORTHO05D004304 2.2e-12 75.5 66 50.0
Pp3c11_23610 Physcomitrium patens HOM05D003756 ORTHO05D004304 3.7e-12 74.7 71 49.3
CBR_g21065 Chara braunii HOM05D003756 ORTHO05D004304 1.8e-11 72.4 74 55.4
MELO3C032936.2 Cucumis melo HOM05D003756 ORTHO05D004304 3.1e-11 71.6 40 77.5
FAN13G0109 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.6e-10 69.3 50 66.0
PSO478G0414 Papaver somniferum HOM05D003756 ORTHO05D004304 3.5e-10 68.2 61 54.1
Dinv33579 Davidia involucrata HOM05D003756 ORTHO05D004304 5.0e-09 64.3 36 77.8
FAN13G3094 Fragaria x ananassa HOM05D003756 ORTHO05D004304 1.5e-08 62.8 56 60.7
FAN04G1204 Fragaria x ananassa HOM05D003756 ORTHO05D004304 6.1e-07 57.4 50 58.0
FAN04G2029 Fragaria x ananassa HOM05D003756 ORTHO05D004304 6.1e-07 57.4 50 58.0
FAN21G3678 Fragaria x ananassa HOM05D002333 ORTHO05D004304 8.0e-07 57.0 39 71.8
Aa31LG10G7740 Aethionema arabicum HOM05D003756 ORTHO05D004304 2.3e-06 55.5 40 65.0
RcHm_v2.0_Chr7g0240761 Rosa chinensis HOM05D003756 ORTHO05D004304 3.0e-06 55.1 40 65.0


User provided reference genes

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