Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.2e-52 209.5 105 100.0
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.1e-50 203.0 105 96.2
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 7.9e-44 180.3 105 87.6
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 1.8e-43 179.1 105 87.6
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 1.8e-43 179.1 105 87.6
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 1.3e-41 172.9 105 83.8
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 2.8e-41 171.8 105 81.0
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 3.7e-41 171.4 105 81.9
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 3.1e-40 168.3 105 81.9
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 4.1e-40 167.9 105 81.9
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 4.1e-40 167.9 105 81.9
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 5.3e-40 167.5 105 82.9
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 5.3e-40 167.5 105 81.9
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 5.3e-40 167.5 105 81.0
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 5.3e-40 167.5 105 82.9
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 6.9e-40 167.2 105 80.0
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 9.1e-40 166.8 105 81.0
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 1.5e-39 166.0 105 80.0
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 80.0
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 80.0
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 80.0
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 81.9
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 81.0
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 81.9
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 81.9
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 2.0e-39 165.6 105 81.0
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 2.6e-39 165.2 105 81.0
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 2.6e-39 165.2 105 81.0
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 81.9
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 3.4e-39 164.9 104 80.8
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 81.0
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 81.0
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 80.0
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 3.4e-39 164.9 105 79.0
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 4.5e-39 164.5 105 78.1
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 4.5e-39 164.5 105 80.0
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 5.9e-39 164.1 105 79.0
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 5.9e-39 164.1 105 80.0
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 5.9e-39 164.1 105 79.0
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 5.9e-39 164.1 106 80.2
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 7.7e-39 163.7 105 79.0
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 7.7e-39 163.7 105 79.0
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 1.0e-38 163.3 105 80.0
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 1.0e-38 163.3 107 79.4
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 1.0e-38 163.3 106 80.2
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 1.3e-38 162.9 104 78.8
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 1.3e-38 162.9 104 78.8
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 1.7e-38 162.5 104 77.9
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 1.7e-38 162.5 105 80.0
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 1.7e-38 162.5 105 79.0
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 2.2e-38 162.2 105 77.1
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 2.9e-38 161.8 105 79.0
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 2.9e-38 161.8 105 79.0
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 3.8e-38 161.4 104 80.8
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 3.8e-38 161.4 104 80.8
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 3.8e-38 161.4 105 79.0
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 5.0e-38 161.0 105 80.0
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 5.0e-38 161.0 105 77.1
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 8.5e-38 160.2 106 78.3
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 8.5e-38 160.2 105 78.1
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 1.1e-37 159.8 105 78.1
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 1.4e-37 159.5 105 77.1
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 1.9e-37 159.1 105 77.1
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 2.5e-37 158.7 105 77.1
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 2.5e-37 158.7 105 78.1
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 2.5e-37 158.7 105 79.0
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 2.5e-37 158.7 104 79.8
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 4.2e-37 157.9 105 77.1
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 5.5e-37 157.5 106 78.3
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 5.5e-37 157.5 105 79.0
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 5.5e-37 157.5 104 76.0
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 1.2e-36 156.4 105 77.1
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 2.1e-36 155.6 105 76.2
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 2.7e-36 155.2 105 74.3
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 2.7e-36 155.2 105 76.2
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 3.6e-36 154.8 105 76.2
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 3.6e-36 154.8 105 75.2
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 4.7e-36 154.5 85 88.2
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 4.7e-36 154.5 105 74.3
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 4.7e-36 154.5 105 76.2
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 4.7e-36 154.5 107 77.6
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 6.1e-36 154.1 85 87.1
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 6.1e-36 154.1 85 87.1
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 7.9e-36 153.7 105 76.2
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 1.0e-35 153.3 105 75.2
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 1.0e-35 153.3 105 75.2
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 1.0e-35 153.3 105 75.2
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 1.8e-35 152.5 105 75.2
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 1.8e-35 152.5 105 74.3
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 2.3e-35 152.1 104 74.0
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 2.3e-35 152.1 104 73.1
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 2.3e-35 152.1 104 73.1
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 5.1e-35 151.0 106 72.6
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 5.1e-35 151.0 106 72.6
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 8.8e-35 150.2 106 72.6
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 8.8e-35 150.2 106 72.6
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 8.8e-35 150.2 107 73.8
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 1.1e-34 149.8 96 81.2
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.5e-34 149.4 106 71.7
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 2.0e-34 149.1 101 76.2
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 5.7e-34 147.5 101 74.3
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 5.7e-34 147.5 103 75.7
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 5.7e-34 147.5 73 95.9
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 3.7e-33 144.8 101 72.3
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 2.4e-32 142.1 96 76.0
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 3.1e-32 141.7 96 75.0
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 1.2e-31 139.8 98 74.5
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 8.5e-30 133.7 97 73.2
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 2.5e-29 132.1 98 68.4
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 9.4e-29 130.2 73 82.2
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 1.2e-28 129.8 74 79.7
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 1.6e-28 129.4 69 85.5
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 2.3e-27 125.6 78 75.6
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 4.1e-24 114.8 88 65.9
Mapoly0058s0109 Marchantia polymorpha HOM05D005547 ORTHO05D006887 1.3e-22 109.8 74 67.6
Pp3c14_25130 Physcomitrium patens HOM05D005547 ORTHO05D006887 2.5e-21 105.5 73 64.4
Pp3c10_11190 Physcomitrium patens HOM05D005547 ORTHO05D006887 9.4e-21 103.6 75 61.3
C02p50170 Brassica napus HOM05D005547 ORTHO05D006887 6.1e-20 100.9 68 73.5
BolC2t11096H Brassica oleracea HOM05D005547 ORTHO05D006887 6.1e-20 100.9 68 73.5
arahy.Tifrunner.gnm1.ann1.FEK9G3 Arachis hypogaea HOM05D005547 ORTHO05D006887 1.0e-19 100.1 64 67.2
BcaC03g17109 Brassica carinata HOM05D005547 ORTHO05D006887 2.6e-18 95.5 54 81.5
GSVIVG01000609001 Vitis vinifera HOM05D005547 ORTHO05D006887 9.8e-18 93.6 57 77.2
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 1.1e-16 90.1 105 54.3
CBR_g4786 Chara braunii HOM05D005547 ORTHO05D006887 1.8e-16 89.4 70 55.7
SMO356G0087 Selaginella moellendorffii HOM05D005547 ORTHO05D006887 1.6e-15 86.3 65 56.9
MCO06G054 Micromonas commoda HOM05D005547 ORTHO05D006887 1.0e-14 83.6 55 63.6
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 1.1e-13 80.1 105 50.5
PRCOL_00006370 Prasinoderma coloniale HOM05D005547 ORTHO05D006887 2.0e-07 59.3 67 44.8


User provided reference genes

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