Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 0.0e+00 1493.4 848 100.0
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 0.0e+00 1471.8 847 96.9
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 0.0e+00 1238.4 833 85.4
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 0.0e+00 1223.8 834 83.7
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 0.0e+00 1219.9 833 85.6
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 0.0e+00 1217.6 833 85.4
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 9.9e-278 960.3 834 72.1
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 2.8e-272 942.2 844 65.6
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.6e-270 934.1 859 64.3
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.4e-268 929.1 857 64.9
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 5.6e-265 917.9 859 62.5
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 1.3e-253 880.2 866 60.0
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.6e-248 863.2 845 61.3
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 2.8e-248 862.4 860 61.5
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 8.1e-248 860.9 869 60.3
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 5.3e-247 858.2 865 60.5
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.4e-246 855.5 869 60.1
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 1.1e-241 840.5 866 60.6
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 1.8e-239 833.2 861 61.7
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 2.4e-239 832.8 868 57.7
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.4e-239 832.8 876 57.4
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 4.5e-238 828.6 865 59.8
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 5.0e-237 825.1 865 59.5
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 2.1e-235 819.7 784 63.1
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 7.9e-235 817.8 864 57.8
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.9e-234 815.5 864 57.6
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 3.9e-234 815.5 858 59.1
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 1.5e-233 813.5 865 58.0
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 3.3e-233 812.4 864 61.6
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.6e-232 810.1 862 58.5
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 2.2e-232 809.7 861 60.4
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 1.1e-231 807.4 845 58.5
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 4.1e-231 805.4 864 56.8
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 6.9e-231 804.7 890 56.4
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 2.0e-230 803.1 867 57.1
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 1.0e-229 800.8 866 58.8
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 3.6e-227 792.3 870 57.9
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 6.1e-227 791.6 865 57.8
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 2.3e-226 789.6 864 59.8
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 1.1e-225 787.3 864 55.9
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 4.3e-225 785.4 869 57.3
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 7.4e-225 784.6 860 57.8
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 7.4e-225 784.6 862 58.7
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 2.8e-224 782.7 860 57.7
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.8e-224 782.7 873 57.4
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 6.3e-224 781.6 860 55.7
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.8e-223 780.0 860 55.3
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.6e-222 776.2 873 56.9
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 2.5e-220 769.6 873 55.0
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.2e-220 769.2 860 60.0
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 9.4e-220 767.7 868 56.5
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.1e-215 754.2 859 59.7
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 4.1e-215 752.3 863 57.2
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 4.5e-214 748.8 862 53.1
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.2e-213 746.5 867 55.7
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 5.0e-213 745.3 863 55.6
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 9.4e-212 741.1 870 57.2
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 8.0e-211 738.0 858 55.5
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 7.5e-209 731.5 864 56.7
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 6.3e-208 728.4 861 51.2
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 1.6e-206 723.8 883 56.6
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.0e-206 723.4 863 53.2
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 4.5e-206 722.2 867 55.6
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 5.9e-206 721.8 883 56.5
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 2.9e-205 719.5 868 55.1
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 6.5e-205 718.4 867 54.6
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 1.2e-203 714.1 860 56.0
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 1.0e-202 711.1 865 56.4
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 4.0e-202 709.1 793 58.3
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 8.8e-202 708.0 864 55.2
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 2.0e-201 706.8 864 55.3
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.6e-201 706.4 864 54.9
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 4.4e-201 705.7 860 55.2
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.7e-200 703.7 864 54.4
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 2.2e-200 703.4 862 53.4
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 6.3e-200 701.8 860 53.6
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 8.3e-200 701.4 856 57.9
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 2.4e-199 699.9 865 55.8
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 4.1e-199 699.1 867 51.4
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 9.1e-199 698.0 868 56.5
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 9.1e-199 698.0 871 51.7
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 2.7e-198 696.4 866 54.8
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.0e-197 694.5 841 56.7
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.7e-197 693.7 864 54.4
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 3.8e-197 692.6 882 52.5
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 1.1e-196 691.0 878 52.2
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 2.5e-196 689.9 866 53.9
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 3.6e-195 686.0 801 57.1
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 3.6e-195 686.0 801 57.1
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 5.7e-193 678.7 879 52.8
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.7e-192 677.2 878 51.1
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 5.4e-191 672.2 862 53.8
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 1.7e-189 667.2 879 51.9
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 2.3e-189 666.8 864 53.0
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 2.5e-188 663.3 889 49.6
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 2.5e-188 663.3 870 51.1
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 6.1e-187 658.7 844 50.5
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 8.0e-187 658.3 840 48.5
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.6e-185 653.3 876 50.2
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 7.5e-185 651.7 928 51.3
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 4.9e-184 649.0 864 51.4
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 5.4e-183 645.6 862 50.5
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 9.2e-183 644.8 871 54.3
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 4.6e-182 642.5 855 51.3
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 6.6e-181 638.6 865 54.0
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 2.5e-180 636.7 864 48.4
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 5.6e-180 635.6 855 52.7
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 5.6e-180 635.6 852 50.6
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 3.6e-179 632.9 887 50.1
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 3.5e-174 616.3 866 51.5
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 3.5e-174 616.3 822 53.0
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 5.2e-170 602.4 861 48.4
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 1.4e-167 594.3 858 49.4
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 1.7e-165 587.4 856 48.8
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 5.1e-165 585.9 864 46.4
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 5.1e-165 585.9 864 48.3
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 5.6e-164 582.4 869 48.3
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 2.9e-160 570.1 864 45.3
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.6e-155 554.3 825 52.1
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 1.2e-153 548.1 749 51.3
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.4e-153 546.6 838 48.2
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 7.6e-153 545.4 842 48.7
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 7.8e-150 535.4 842 46.1
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 2.1e-147 527.3 861 45.6
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 3.6e-147 526.6 867 47.2
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 1.8e-146 524.2 852 44.5
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 2.4e-146 523.9 863 44.1
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 3.1e-146 523.5 867 47.2
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 6.9e-146 522.3 862 46.6
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 9.0e-146 521.9 863 45.9
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 9.0e-146 521.9 771 47.6
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.6e-145 520.4 743 45.9
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 3.8e-144 516.5 791 50.6
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 1.9e-143 514.2 862 45.9
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 3.2e-143 513.5 862 45.6
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 5.4e-143 512.7 863 45.9
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 4.3e-140 503.1 853 44.5
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 7.4e-140 502.3 859 45.2
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 1.2e-137 495.0 875 44.6
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 6.4e-136 489.2 694 52.3
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 5.6e-132 476.1 874 42.2
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 5.6e-132 476.1 781 42.9
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 9.0e-130 468.8 862 46.1
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 1.5e-129 468.0 875 44.0
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 2.0e-129 467.6 878 44.1
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 1.6e-118 431.4 654 52.3
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 4.1e-114 416.8 862 40.8
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 1.0e-112 412.1 810 44.3
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 8.5e-112 409.1 727 46.4
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 1.6e-110 404.8 717 45.0
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 3.9e-109 400.2 799 42.2
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 7.7e-105 386.0 455 57.6
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 5.9e-97 359.8 872 36.7
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 1.4e-93 348.6 880 38.5
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 2.3e-93 347.8 873 37.5
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.7e-91 341.7 276 65.2
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 1.8e-90 338.2 880 37.0
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 5.3e-90 336.7 756 39.7
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 2.7e-89 334.3 756 41.0
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.9e-87 328.2 600 51.3
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 1.7e-80 305.1 886 37.6
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 8.6e-80 302.8 886 37.6
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 2.1e-78 298.1 865 35.0
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 2.5e-71 274.6 373 48.3
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.2e-68 265.8 824 35.4
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 7.5e-68 263.1 859 35.5
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 4.1e-66 257.3 356 46.1
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 1.4e-61 242.3 228 60.1
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 5.4e-58 230.3 344 41.6
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.2e-57 229.2 353 43.1
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.2e-54 219.2 306 42.5
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 6.2e-54 216.9 428 42.8
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 5.2e-53 213.8 307 43.0
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 6.2e-46 190.3 324 39.5
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.4e-44 184.5 166 55.4
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.3e-40 172.6 97 89.7
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 1.7e-40 172.2 262 41.6
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.6e-38 165.6 184 52.7
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.1e-38 163.3 279 38.0
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 5.2e-37 160.6 275 41.8
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 3.9e-32 144.4 291 52.9
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 4.0e-29 134.4 327 34.6
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.0e-13 81.3 142 38.0


User provided reference genes

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