Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000121g0250 Nicotiana tabacum HOM05D000403 ORTHO05D282527 3.0e-51 204.9 105 100.0
Peaxi162Scf00148g01211 Petunia axillaris HOM05D000403 ORTHO05D000350 1.5e-10 69.7 78 50.0
Nitab4.5_0000941g0160 Nicotiana tabacum HOM05D000403 ORTHO05D000350 3.4e-10 68.6 88 46.6
Nitab4.5_0002398g0020 Nicotiana tabacum HOM05D000403 ORTHO05D000350 4.4e-10 68.2 88 45.5
Peaxi162Scf00047g00084 Petunia axillaris HOM05D000403 ORTHO05D000350 2.2e-09 65.9 88 44.3
PGSC0003DMG400038453 Solanum tuberosum HOM05D000403 ORTHO05D000350 3.1e-08 62.0 78 46.2
TWI32G0267 Tripterygium wilfordii HOM05D000403 ORTHO05D000350 3.1e-08 62.0 92 38.0
CAN.G3369.1 Capsicum annuum HOM05D000403 ORTHO05D000350 4.1e-08 61.6 78 47.4
CAN.G500.33 Capsicum annuum HOM05D000403 ORTHO05D000350 4.1e-08 61.6 78 47.4
CAN.G500.37 Capsicum annuum HOM05D000403 ORTHO05D000350 4.1e-08 61.6 78 47.4
FAN17G2970 Fragaria x ananassa HOM05D000403 ORTHO05D000350 9.2e-08 60.5 81 43.2
TAR383G0350 Trochodendron aralioides HOM05D000403 ORTHO05D000350 1.2e-07 60.1 87 42.5
CAN.G500.34 Capsicum annuum HOM05D000403 ORTHO05D000350 1.6e-07 59.7 77 48.1
CAN.G500.38 Capsicum annuum HOM05D000403 ORTHO05D000350 1.6e-07 59.7 87 43.7
CAN.G500.40 Capsicum annuum HOM05D000403 ORTHO05D000350 1.6e-07 59.7 78 46.2
Dinv22101 Davidia involucrata HOM05D000403 ORTHO05D000350 1.6e-07 59.7 78 43.6
FvH4_4g10130 Fragaria vesca HOM05D000403 ORTHO05D000350 1.6e-07 59.7 81 42.0
Eucgr.C01171 Eucalyptus grandis HOM05D000403 ORTHO05D000350 2.0e-07 59.3 85 40.0
Medtr0011s0280 Medicago truncatula HOM05D000403 ORTHO05D000350 2.0e-07 59.3 80 42.5
Prupe.7G242400 Prunus persica HOM05D000403 ORTHO05D000350 2.0e-07 59.3 78 46.2
TAR383G0204 Trochodendron aralioides HOM05D000403 ORTHO05D000350 2.0e-07 59.3 88 40.9
TWI34G0854 Tripterygium wilfordii HOM05D000403 ORTHO05D000350 2.7e-07 58.9 92 37.0
Atru.chr12.2287 Acer truncatum HOM05D000403 ORTHO05D000350 3.5e-07 58.5 92 37.0
Glyma.06G222500 Glycine max HOM05D000403 ORTHO05D000350 4.5e-07 58.2 78 41.0
FAN07G2979 Fragaria x ananassa HOM05D000403 ORTHO05D000350 5.9e-07 57.8 81 42.0
Psat1g027280 Pisum sativum HOM05D000403 ORTHO05D000350 5.9e-07 57.8 80 41.2
CSS0045380 Camellia sinensis var. sinensis HOM05D000403 ORTHO05D000350 7.7e-07 57.4 78 42.3
Cc06_g19020 Coffea canephora HOM05D000403 ORTHO05D000350 7.7e-07 57.4 78 42.3
Dinv04430 Davidia involucrata HOM05D000403 ORTHO05D000350 7.7e-07 57.4 78 42.3
RcHm_v2.0_Chr2g0088561 Rosa chinensis HOM05D000403 ORTHO05D000350 7.7e-07 57.4 81 40.7
CSS0003862 Camellia sinensis var. sinensis HOM05D000403 ORTHO05D000350 1.0e-06 57.0 77 45.5
CAN.G500.42 Capsicum annuum HOM05D000403 ORTHO05D000350 1.0e-06 57.0 78 43.6
Cpa.g.sc75.38 Carica papaya HOM05D000403 ORTHO05D000350 1.0e-06 57.0 82 37.8
Cfa003369 Carpinus fangiana HOM05D000403 ORTHO05D000350 1.0e-06 57.0 84 38.1
Sopen09g034600 Solanum pennellii HOM05D000403 ORTHO05D000350 1.0e-06 57.0 78 39.7
VMungo1309G0955 Vigna mungo HOM05D000403 ORTHO05D000350 1.0e-06 57.0 88 38.6
CAN.G3369.2 Capsicum annuum HOM05D000403 ORTHO05D000350 1.3e-06 56.6 73 46.6
CAN.G500.36 Capsicum annuum HOM05D000403 ORTHO05D000350 1.3e-06 56.6 73 46.6
Cc06_g19030 Coffea canephora HOM05D000403 ORTHO05D000350 1.3e-06 56.6 78 42.3
Phvul.009G197800 Phaseolus vulgaris HOM05D000403 ORTHO05D000350 1.3e-06 56.6 88 37.5
CSS0012100 Camellia sinensis var. sinensis HOM05D000403 ORTHO05D000350 1.7e-06 56.2 78 37.2
MD15G1173400 Malus domestica HOM05D000403 ORTHO05D000350 1.7e-06 56.2 77 45.5
Oeu018468.1 Olea europaea HOM05D000403 ORTHO05D000350 1.7e-06 56.2 78 41.0
DCAR_020921 Daucus carota HOM05D000403 ORTHO05D000350 2.3e-06 55.8 78 38.5
FvH4_5g03870 Fragaria vesca HOM05D000403 ORTHO05D000350 2.9e-06 55.5 77 46.8
Ah.09g226130 Amaranthus hybridus HOM05D000403 ORTHO05D000350 3.8e-06 55.1 76 44.7
Ciclev10008330m.g Citrus clementina HOM05D000403 ORTHO05D000350 3.8e-06 55.1 91 39.6
Manes.05G120000 Manihot esculenta HOM05D000403 ORTHO05D000350 3.8e-06 55.1 92 32.6
Psat6g198680 Pisum sativum HOM05D000403 ORTHO05D000350 3.8e-06 55.1 80 38.8
MBI04_g08011_MAGBIO Magnolia biondii HOM05D000403 ORTHO05D000350 5.0e-06 54.7 78 41.0
RcHm_v2.0_Chr2g0088551 Rosa chinensis HOM05D000403 ORTHO05D000350 5.0e-06 54.7 77 44.2
CiPaw.03G243800 Carya illinoinensis HOM05D000403 ORTHO05D000350 6.6e-06 54.3 80 42.5
PGR142G2362 Punica granatum HOM05D000403 ORTHO05D000350 6.6e-06 54.3 82 39.0
TPR.G21251 Trifolium pratense HOM05D000403 ORTHO05D000350 6.6e-06 54.3 80 41.2
CSS0025714 Camellia sinensis var. sinensis HOM05D000403 ORTHO05D000350 8.6e-06 53.9 78 39.7
Haze_25583 Corylus avellana HOM05D000403 ORTHO05D000350 8.6e-06 53.9 81 37.0
Manes.05G119600 Manihot esculenta HOM05D000403 ORTHO05D000350 8.6e-06 53.9 82 37.8


User provided reference genes

Program Settings