Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 2.0e-40 168.7 87 100.0
Nitab4.5_0008269g0020 Nicotiana tabacum HOM05D007106 ORTHO05D007770 2.3e-33 145.2 87 86.2
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 3.3e-27 124.8 87 72.4
PGSC0003DMG400019989 Solanum tuberosum HOM05D007106 ORTHO05D007770 1.9e-22 109.0 82 70.7
Sopen06g004820 Solanum pennellii HOM05D007106 ORTHO05D007770 2.3e-20 102.1 81 64.2
Sopen12g025630 Solanum pennellii HOM05D007106 ORTHO05D007770 4.3e-19 97.8 82 63.4
Solyc07g150120.1 Solanum lycopersicum HOM05D007106 ORTHO05D007770 1.2e-18 96.3 81 60.5
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 8.4e-15 83.6 83 54.2
Peaxi162Scf00274g00521 Petunia axillaris HOM05D007106 ORTHO05D007770 1.9e-14 82.4 88 60.2
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 5.4e-14 80.9 84 56.0
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 7.1e-14 80.5 83 51.8
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 6.0e-13 77.4 83 48.2
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 6.0e-13 77.4 80 52.5
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 6.0e-13 77.4 80 52.5
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 6.0e-13 77.4 87 50.6
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 6.0e-13 77.4 87 50.6
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.3e-12 76.3 84 51.2
Nitab4.5_0001128g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.1e-11 73.2 87 54.0
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 9.6e-11 70.1 83 43.4
Dinv38719 Davidia involucrata HOM05D007106 ORTHO05D007770 1.3e-10 69.7 87 50.6
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 3.6e-10 68.2 84 48.8
Oeu047292.1 Olea europaea HOM05D007106 ORTHO05D007770 3.6e-10 68.2 86 51.2
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 4.8e-10 67.8 83 44.6
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 6.2e-10 67.4 86 46.5
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 8.1e-10 67.0 84 48.8
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.1e-09 66.6 84 47.6
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 1.4e-09 66.2 78 53.8
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 1.8e-09 65.9 84 50.0
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 2.4e-09 65.5 83 45.8
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 2.4e-09 65.5 83 45.8
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 3.1e-09 65.1 86 45.3
Thecc.03G089800 Theobroma cacao HOM05D007106 ORTHO05D007770 1.5e-08 62.8 83 47.0
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 2.0e-08 62.4 83 49.4
Medtr3g435530 Medicago truncatula HOM05D007106 ORTHO05D007770 2.0e-08 62.4 90 41.1
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 2.0e-08 62.4 80 46.2
Psat5g199960 Pisum sativum HOM05D007106 ORTHO05D007770 2.6e-08 62.0 90 44.4
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 2.6e-08 62.0 84 44.0
Cfa018934 Carpinus fangiana HOM05D007106 ORTHO05D007770 3.4e-08 61.6 86 45.3
Cc04_g16540 Coffea canephora HOM05D007106 ORTHO05D007770 3.4e-08 61.6 86 48.8
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 5.8e-08 60.8 87 42.5
Solyc03g115950.3 Solanum lycopersicum HOM05D007106 ORTHO05D007770 5.8e-08 60.8 89 47.2
PGSC0003DMG400019509 Solanum tuberosum HOM05D007106 ORTHO05D007770 5.8e-08 60.8 90 47.8
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 7.6e-08 60.5 78 46.2
CiPaw.12G013000 Carya illinoinensis HOM05D007106 ORTHO05D007770 7.6e-08 60.5 86 46.5
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 7.6e-08 60.5 83 47.0
Cc11_g12880 Coffea canephora HOM05D007106 ORTHO05D007770 9.9e-08 60.1 83 41.0
Gohir.D07G070600 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.7e-07 59.3 83 49.4
Gorai.001G074500 Gossypium raimondii HOM05D007106 ORTHO05D007770 1.7e-07 59.3 83 49.4
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 1.7e-07 59.3 89 46.1
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 1.7e-07 59.3 85 44.7
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 1.7e-07 59.3 88 40.9
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 2.2e-07 58.9 91 42.9
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 3.8e-07 58.2 83 39.8
Lj4g0015417 Lotus japonicus HOM05D007106 ORTHO05D007770 4.9e-07 57.8 87 39.1
CANSAT80G2807 Cannabis sativa HOM05D007106 ORTHO05D007770 8.4e-07 57.0 85 41.2
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.1e-06 56.6 86 44.2
Glyma.17G100900 Glycine max HOM05D007106 ORTHO05D007770 1.1e-06 56.6 87 39.1
Gohir.A07G066100 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.4e-06 56.2 83 48.2
Glyma.05G026000 Glycine max HOM05D007106 ORTHO05D007770 3.2e-06 55.1 87 39.1
HanXRQChr05g0155941 Helianthus annuus HOM05D007106 ORTHO05D007770 5.4e-06 54.3 82 42.7
Eucgr.K02478 Eucalyptus grandis HOM05D007106 ORTHO05D007770 7.1e-06 53.9 83 44.6
Solyc12g062690.2 Solanum lycopersicum HOM05D007106 ORTHO05D007770 9.3e-06 53.5 36 66.7


User provided reference genes

Program Settings