Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 2.5e-136 488.8 249 100.0
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 7.2e-128 460.7 249 94.0
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 4.0e-102 375.2 245 79.6
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 8.9e-102 374.0 247 77.3
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 1.5e-101 373.2 247 76.9
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 3.4e-101 372.1 247 76.1
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 1.3e-100 370.2 247 76.5
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 2.1e-55 219.9 253 50.6
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 2.1e-50 203.4 252 45.2
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 4.3e-48 195.7 225 48.9
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 8.2e-47 191.4 252 45.6
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 9.0e-46 188.0 251 44.2
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 2.0e-45 186.8 246 43.9
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.2e-42 177.6 253 39.5
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 2.1e-42 176.8 249 45.4
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 2.7e-42 176.4 254 42.1
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 4.6e-42 175.6 257 40.9
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 1.0e-41 174.5 253 41.5
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 1.3e-41 174.1 259 39.0
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 1.8e-41 173.7 266 40.2
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 2.3e-41 173.3 256 41.8
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 3.9e-41 172.6 265 42.3
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 1.1e-40 171.0 222 45.9
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 1.3e-39 167.5 265 40.4
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 2.8e-39 166.4 261 39.8
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 2.8e-39 166.4 270 41.1
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 4.8e-39 165.6 263 38.4
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.1e-38 164.5 262 41.6
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.5e-37 160.6 236 40.7
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 2.0e-37 160.2 260 38.5
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 3.4e-37 159.5 247 41.7
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 5.9e-37 158.7 258 39.1
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.3e-36 157.5 264 38.6
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 5.0e-36 155.6 260 40.0
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 6.5e-36 155.2 266 38.0
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 6.5e-36 155.2 261 41.0
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 1.1e-35 154.5 265 38.9
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 1.1e-35 154.5 237 40.5
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 1.1e-35 154.5 231 40.7
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.9e-35 153.7 259 38.6
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 2.5e-35 153.3 260 40.8
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 1.2e-34 151.0 260 41.2
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 1.2e-34 151.0 265 37.0
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 1.6e-34 150.6 262 39.7
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 2.7e-34 149.8 267 39.3
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 3.6e-34 149.4 262 38.2
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 4.6e-34 149.1 254 39.8
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 6.1e-34 148.7 199 43.7
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 7.9e-34 148.3 258 39.1
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 3.0e-33 146.4 215 39.1
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 6.7e-33 145.2 266 37.2
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 6.7e-33 145.2 199 48.2
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.1e-32 144.4 260 39.6
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 2.5e-32 143.3 254 38.6
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 5.7e-32 142.1 267 36.7
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 5.7e-32 142.1 225 40.4
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 3.7e-31 139.4 217 39.2
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.8e-31 139.0 261 36.0
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 6.3e-31 138.7 261 36.0
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 6.3e-31 138.7 281 36.3
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.1e-30 137.9 235 39.6
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 4.1e-30 136.0 283 35.0
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 5.3e-30 135.6 258 35.7
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 9.1e-30 134.8 249 37.3
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 1.2e-29 134.4 228 40.8
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 1.2e-29 134.4 261 35.2
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 1.5e-29 134.0 239 38.1
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.0e-29 133.7 258 34.9
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 3.4e-29 132.9 232 39.2
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.9e-29 132.1 262 35.1
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 1.3e-28 131.0 260 36.2
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.7e-28 130.6 258 34.1
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 3.2e-27 126.3 225 40.4
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 4.2e-27 125.9 236 36.9
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 7.2e-27 125.2 284 33.5
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.6e-26 124.0 214 39.3
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 3.6e-26 122.9 234 34.6
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 2.6e-24 116.7 250 34.4
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 3.3e-24 116.3 105 57.1
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 1.1e-22 111.3 268 32.1
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 1.8e-22 110.5 91 56.0
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 2.9e-20 103.2 91 53.8
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 7.2e-19 98.6 232 34.9
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 9.4e-19 98.2 83 54.2
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 1.6e-18 97.4 129 42.6
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 4.7e-18 95.9 83 53.0
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 4.7e-18 95.9 83 53.0
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 4.7e-18 95.9 83 53.0
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 4.7e-18 95.9 144 38.2
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 6.1e-18 95.5 129 41.9
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 6.1e-18 95.5 129 41.9
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 8.0e-18 95.1 80 53.8
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 1.0e-17 94.7 128 40.6
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 1.4e-17 94.4 281 30.2
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 1.8e-17 94.0 142 38.0
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 1.8e-17 94.0 128 40.6
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 2.3e-17 93.6 256 29.7
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 6.7e-17 92.0 83 51.8
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 5.7e-16 89.0 85 50.6
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 3.8e-12 76.3 94 44.7
AagrBONN_evm.TU.Sc2ySwM_340.357 Anthoceros agrestis HOM05D007404 ORTHO05D009281 1.8e-09 67.4 67 47.8
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 3.3e-08 63.2 94 43.6
CDE01G0585 Ceratophyllum demersum HOM05D002304 ORTHO05D002363 4.8e-07 59.3 56 50.0
QL03p049930 Quercus lobata HOM05D002304 ORTHO05D002363 6.3e-07 58.9 65 40.0
CANSAT01G2027 Cannabis sativa HOM05D002304 ORTHO05D002363 1.1e-06 58.2 60 45.0
Phvul.008G018600 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 1.1e-06 58.2 63 41.3
Manes.09G186400 Manihot esculenta HOM05D002304 ORTHO05D002363 1.4e-06 57.8 65 40.0
Sabra01G0045200 Salix brachista HOM05D002304 ORTHO05D002363 2.4e-06 57.0 73 42.5
Aqoxy5G03199 Aquilegia oxysepala HOM05D002304 ORTHO05D002363 3.1e-06 56.6 74 41.9
CiPaw.05G103300 Carya illinoinensis HOM05D002304 ORTHO05D002363 4.1e-06 56.2 65 40.0
Potri.001G062800 Populus trichocarpa HOM05D002304 ORTHO05D002363 4.1e-06 56.2 67 43.3
Potri.003G164600 Populus trichocarpa HOM05D002304 ORTHO05D002363 4.1e-06 56.2 67 43.3
Sabra03G0119800 Salix brachista HOM05D002304 ORTHO05D002363 4.1e-06 56.2 67 43.3
CiPaw.06G108100 Carya illinoinensis HOM05D002304 ORTHO05D002363 5.3e-06 55.8 65 40.0
Haze_12481 Corylus avellana HOM05D002304 ORTHO05D002363 5.3e-06 55.8 65 38.5
Eucgr.G01957 Eucalyptus grandis HOM05D002304 ORTHO05D002363 7.0e-06 55.5 57 45.6
SMO364G0391 Selaginella moellendorffii HOM05D002304 ORTHO05D002363 7.0e-06 55.5 76 35.5
VMungo1383G0264 Vigna mungo HOM05D002304 ORTHO05D002363 7.0e-06 55.5 69 40.6
EL10Ac6g13591 Beta vulgaris HOM05D002304 ORTHO05D002363 9.1e-06 55.1 80 36.2
Manes.08G102500 Manihot esculenta HOM05D002304 ORTHO05D002363 9.1e-06 55.1 62 40.3
Phvul.008G018900 Phaseolus vulgaris HOM05D002304 ORTHO05D002363 9.1e-06 55.1 69 40.6
TWI75G1229 Tripterygium wilfordii HOM05D002304 ORTHO05D002363 9.1e-06 55.1 65 38.5


User provided reference genes

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