Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000115g0160 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.2e-71 270.4 148 100.0
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.8e-37 157.5 110 84.5
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 7.8e-37 157.5 104 86.5
Nitab4.5_0000679g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.0e-36 157.1 106 84.9
Nitab4.5_0004669g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.6e-36 154.5 106 83.0
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-35 153.7 106 84.0
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-35 153.7 104 84.6
Nitab4.5_0001488g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-35 150.6 100 87.0
Nitab4.5_0001960g0100 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-35 150.6 104 83.7
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-33 146.7 104 80.8
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.2e-33 144.8 102 81.4
Nitab4.5_0000239g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.6e-32 142.5 100 81.0
Nitab4.5_0001583g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.3e-31 140.2 106 78.3
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.3e-31 137.5 106 74.5
Nitab4.5_0013975g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-30 136.3 104 77.9
Nitab4.5_0002002g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.4e-30 136.0 94 85.1
Nitab4.5_0000903g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.1e-30 135.2 106 75.5
Nitab4.5_0004998g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.4e-30 134.8 102 76.5
Nitab4.5_0006253g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-28 129.8 106 73.6
Nitab4.5_0022390g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-28 129.8 90 84.4
Nitab4.5_0005115g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-28 129.4 90 85.6
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.9e-28 128.6 84 88.1
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.9e-27 126.3 84 86.9
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-26 123.6 79 89.9
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.4e-25 120.2 79 86.1
Nitab4.5_0000472g0250 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.1e-25 119.0 87 80.5
Nitab4.5_0007225g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.0e-25 118.6 77 88.3
Nitab4.5_0004446g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.2e-25 118.2 85 80.0
Nitab4.5_0000141g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-24 116.7 90 81.1
Nitab4.5_0000836g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.7e-23 113.2 92 72.8
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-23 112.8 75 85.3
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 6.4e-23 111.3 95 71.6
Nitab4.5_0001179g0140 Nicotiana tabacum HOM05D003574 ORTHO05D000638 6.4e-23 111.3 77 83.1
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 3.2e-22 109.0 118 54.2
Nitab4.5_0000621g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-21 107.1 79 81.0
PGSC0003DMG400001088 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.6e-21 106.7 106 57.5
Nitab4.5_0003579g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-21 106.3 66 89.4
PGSC0003DMG400013727 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.7e-21 105.9 106 57.5
Nitab4.5_0000230g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-21 105.5 86 73.3
Nitab4.5_0023019g0010 Nicotiana tabacum HOM05D003574 ORTHO05D012628 4.6e-21 105.1 70 84.3
Nitab4.5_0000199g0130 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.0e-21 104.8 76 80.3
Nitab4.5_0005402g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.0e-21 104.8 95 68.4
PGSC0003DMG400039961 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.3e-20 103.6 106 55.7
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 2.3e-20 102.8 106 55.7
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 5.1e-20 101.7 119 51.3
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 5.1e-20 101.7 108 53.7
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 8.6e-20 100.9 118 51.7
Nitab4.5_0000006g0070 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-19 100.1 67 79.1
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.9e-19 99.8 102 56.9
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 2.5e-19 99.4 106 54.7
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 9.5e-19 97.4 106 59.4
Nitab4.5_0010651g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-18 96.3 86 72.1
PGSC0003DMG400044250 Solanum tuberosum HOM05D003574 ORTHO05D002175 2.1e-18 96.3 93 60.2
Nitab4.5_0003015g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.6e-18 95.5 65 84.6
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 3.6e-18 95.5 92 60.9
Nitab4.5_0000142g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-17 93.2 67 82.1
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.8e-17 93.2 62 83.9
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.5e-16 90.1 75 74.7
Nitab4.5_0001371g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-15 86.3 58 86.2
Nitab4.5_0004356g0040 Nicotiana tabacum HOM05D003574 ORTHO05D012628 2.2e-15 86.3 98 59.2
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.4e-15 84.7 54 85.2
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.3e-15 84.3 104 51.9
Nitab4.5_0006582g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.1e-14 84.0 81 64.2
PGSC0003DMG400043763 Solanum tuberosum HOM05D003574 ORTHO05D002175 5.4e-14 81.6 87 54.0
Nitab4.5_0003295g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.2e-10 70.5 103 50.5
Sopen12g023050 Solanum pennellii HOM05D003574 ORTHO05D002175 4.7e-10 68.6 79 53.2
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.7e-10 68.6 59 62.7
Nitab4.5_0007326g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 1.8e-09 66.6 44 90.9
Nitab4.5_0000160g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.6e-08 61.2 60 63.3
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-07 60.1 99 43.4
Nitab4.5_0005263g0060 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.2e-07 59.7 39 87.2
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 6.4e-07 58.2 120 33.3
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-07 57.8 94 41.5
PGSC0003DMG400023225 Solanum tuberosum HOM05D003574 ORTHO05D002175 8.4e-07 57.8 64 53.1
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-06 57.4 113 32.7
PGSC0003DMG400045822 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.1e-06 57.4 76 46.1
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.2e-06 55.8 100 37.0
Sopen10g019390 Solanum pennellii HOM05D003574 ORTHO05D002175 7.1e-06 54.7 71 45.1


User provided reference genes

Program Settings