Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000110g0510 Nicotiana tabacum HOM05D008139 ORTHO05D009872 8.7e-83 310.5 180 100.0
Nitab4.5_0003246g0060 Nicotiana tabacum HOM05D008139 ORTHO05D009872 3.7e-73 278.5 176 84.1
Peaxi162Scf00057g00045 Petunia axillaris HOM05D008139 ORTHO05D009872 3.8e-30 135.6 103 66.0
CAN.G1126.30 Capsicum annuum HOM05D008139 ORTHO05D009872 4.2e-29 132.1 140 59.3
PGSC0003DMG400005169 Solanum tuberosum HOM05D008139 ORTHO05D009872 3.6e-28 129.0 177 44.1
Solyc04g080070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 6.3e-25 118.2 197 39.1
Sopen04g033660 Solanum pennellii HOM05D008139 ORTHO05D009872 1.4e-24 117.1 204 37.7
Nitab4.5_0000790g0110 Nicotiana tabacum HOM05D008139 ORTHO05D009872 2.1e-20 103.2 87 56.3
CAN.G1139.6 Capsicum annuum HOM05D008139 ORTHO05D009872 8.9e-19 97.8 88 52.3
Nitab4.5_0002296g0050 Nicotiana tabacum HOM05D008139 ORTHO05D009872 2.2e-17 93.2 78 56.4
PGSC0003DMG400045933 Solanum tuberosum HOM05D008139 ORTHO05D009872 1.8e-16 90.1 81 53.1
SGA_v2.0_scaffold374G50235 Striga asiatica HOM05D008139 ORTHO05D009872 2.4e-16 89.7 82 47.6
Solyc12g089070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 5.4e-16 88.6 95 47.4
Hma1.2p1_0249F.1_g102430 Hydrangea macrophylla HOM05D008139 ORTHO05D009872 2.7e-15 86.3 80 56.2
Duzib133G0708 Durio zibethinus HOM05D008139 ORTHO05D009872 8.6e-14 81.3 83 49.4
Potri.017G037500 Populus trichocarpa HOM05D008139 ORTHO05D009872 8.6e-14 81.3 86 50.0
CSS0007440 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 3.3e-13 79.3 76 55.3
Lj3g0004995 Lotus japonicus HOM05D008139 ORTHO05D009872 3.3e-13 79.3 98 49.0
Lalb_Chr03g0028851 Lupinus albus HOM05D008139 ORTHO05D009872 3.3e-13 79.3 86 48.8
Lsat_1_v5_gn_8_128280 Lactuca sativa HOM05D008139 ORTHO05D009872 4.3e-13 79.0 76 53.9
SalBow8G2406 Salvia bowleyana HOM05D008139 ORTHO05D009872 4.3e-13 79.0 104 43.3
SalBow8G2479 Salvia bowleyana HOM05D008139 ORTHO05D009872 4.3e-13 79.0 104 43.3
Thecc.04G120400 Theobroma cacao HOM05D008139 ORTHO05D009872 4.3e-13 79.0 77 53.2
TWI36G0135 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 4.3e-13 79.0 80 52.5
CSS0007820 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 5.6e-13 78.6 86 51.2
Lsat_1_v5_gn_5_103860 Lactuca sativa HOM05D008139 ORTHO05D009872 7.3e-13 78.2 76 53.9
Potri.007G122500 Populus trichocarpa HOM05D008139 ORTHO05D009872 7.3e-13 78.2 88 47.7
Phvul.011G105800 Phaseolus vulgaris HOM05D008139 ORTHO05D009872 1.2e-12 77.4 87 46.0
RcHm_v2.0_Chr2g0126901 Rosa chinensis HOM05D008139 ORTHO05D009872 1.6e-12 77.0 79 54.4
Cfa014432 Carpinus fangiana HOM05D008139 ORTHO05D009872 2.8e-12 76.3 77 51.9
Cc10_g03180 Coffea canephora HOM05D008139 ORTHO05D009872 3.6e-12 75.9 76 51.3
PGR083G1842 Punica granatum HOM05D008139 ORTHO05D009872 6.2e-12 75.1 91 48.4
SGA_v2.0_scaffold48G18067 Striga asiatica HOM05D008139 ORTHO05D009872 6.2e-12 75.1 92 42.4
Ciclev10017826m.g Citrus clementina HOM05D008139 ORTHO05D009872 8.0e-12 74.7 78 51.3
COL.COLO4_15724 Corchorus olitorius HOM05D008139 ORTHO05D009872 1.8e-11 73.6 89 42.7
Gohir.D11G168166 Gossypium hirsutum HOM05D008139 ORTHO05D009872 2.3e-11 73.2 78 48.7
Gorai.007G179600 Gossypium raimondii HOM05D008139 ORTHO05D009872 2.3e-11 73.2 78 48.7
Prupe.3G131300 Prunus persica HOM05D008139 ORTHO05D009872 2.3e-11 73.2 80 50.0
Migut.C00700 Erythranthe guttata HOM05D008139 ORTHO05D009872 3.1e-11 72.8 92 45.7
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 4.0e-11 72.4 80 43.8
Nn1g07030 Nelumbo nucifera HOM05D008139 ORTHO05D009872 5.2e-11 72.0 76 51.3
Rhsim06G0158900 Rhododendron simsii HOM05D008139 ORTHO05D009872 5.2e-11 72.0 74 52.7
TWI75G0563 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 5.2e-11 72.0 85 47.1
DCAR_019772 Daucus carota HOM05D008139 ORTHO05D009872 6.8e-11 71.6 76 50.0
Dinv02745 Davidia involucrata HOM05D008139 ORTHO05D009872 8.9e-11 71.2 66 56.1
FAN02G4280 Fragaria x ananassa HOM05D008139 ORTHO05D009872 8.9e-11 71.2 79 51.9
Gohir.A11G161900 Gossypium hirsutum HOM05D008139 ORTHO05D009872 1.2e-10 70.9 78 48.7
Prupe.2G122300 Prunus persica HOM05D008139 ORTHO05D009872 1.2e-10 70.9 81 51.9
MD07G1098300 Malus domestica HOM05D008139 ORTHO05D009872 1.5e-10 70.5 81 50.6
Medtr4g046720 Medicago truncatula HOM05D008139 ORTHO05D009872 1.5e-10 70.5 77 46.8
Sabra17G0024400 Salix brachista HOM05D008139 ORTHO05D009872 2.0e-10 70.1 88 43.2
Migut.N00505 Erythranthe guttata HOM05D008139 ORTHO05D009872 2.6e-10 69.7 78 43.6
QL08p033688 Quercus lobata HOM05D008139 ORTHO05D009872 2.6e-10 69.7 77 49.4
Manes.13G103000 Manihot esculenta HOM05D008139 ORTHO05D009872 3.4e-10 69.3 77 48.1
TAR626G0598 Trochodendron aralioides HOM05D008139 ORTHO05D009872 7.5e-10 68.2 73 47.9
Atru.chr6.3157 Acer truncatum HOM05D008139 ORTHO05D009872 1.3e-09 67.4 77 44.2
Sed0019249 Sechium edule HOM05D008139 ORTHO05D009872 1.7e-09 67.0 88 40.9
TPR.G19049 Trifolium pratense HOM05D008139 ORTHO05D009872 2.2e-09 66.6 77 48.1
Glyma.12G100900 Glycine max HOM05D008139 ORTHO05D009872 2.9e-09 66.2 77 49.4
unitig_46.g17928 Utricularia gibba HOM05D008139 ORTHO05D009872 3.7e-09 65.9 79 44.3
CiPaw.04G117200 Carya illinoinensis HOM05D008139 ORTHO05D009872 6.4e-09 65.1 98 42.9
ClCG02G001810 Citrullus lanatus HOM05D008139 ORTHO05D009872 1.1e-08 64.3 88 39.8
CARHR126180 Cardamine hirsuta HOM05D011011 ORTHO05D009872 3.2e-08 62.8 82 42.7
TAR626G0589 Trochodendron aralioides HOM05D008139 ORTHO05D009872 3.2e-08 62.8 73 43.8
Eucgr.A01721 Eucalyptus grandis HOM05D008139 ORTHO05D009872 7.0e-08 61.6 88 44.3
THA.LOC104816105 Tarenaya hassleriana HOM05D011011 ORTHO05D009872 1.2e-07 60.8 89 43.8
BcaC02g07938 Brassica carinata HOM05D011011 ORTHO05D009872 2.7e-07 59.7 101 36.6
C04p61740 Brassica napus HOM05D011011 ORTHO05D009872 2.7e-07 59.7 101 36.6
BcaB01g03981 Brassica carinata HOM05D011011 ORTHO05D009872 4.6e-07 58.9 103 37.9
BolC4t27657H Brassica oleracea HOM05D011011 ORTHO05D009872 4.6e-07 58.9 101 35.6
MELO3C018806.2 Cucumis melo HOM05D008139 ORTHO05D009872 7.8e-07 58.2 89 39.3
Potri.017G037400 Populus trichocarpa HOM05D008139 ORTHO05D009872 1.7e-06 57.0 57 45.6
Aqoxy4G01991 Aquilegia oxysepala HOM05D008139 ORTHO05D009872 2.3e-06 56.6 73 41.1
BolC3t14501H Brassica oleracea HOM05D011011 ORTHO05D009872 3.0e-06 56.2 103 34.0
Sp4g14730 Schrenkiella parvula HOM05D011011 ORTHO05D009872 3.0e-06 56.2 96 35.4
BcaB06g28588 Brassica carinata HOM05D011011 ORTHO05D009872 5.0e-06 55.5 101 34.7
A03p18150 Brassica napus HOM05D011011 ORTHO05D009872 5.0e-06 55.5 97 35.1
BraA03t11075Z Brassica rapa HOM05D011011 ORTHO05D009872 5.0e-06 55.5 97 35.1
CsaV3_7G003730 Cucumis sativus L. HOM05D008139 ORTHO05D009872 5.0e-06 55.5 91 36.3


User provided reference genes

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