Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000110g0470 Nicotiana tabacum HOM05D006576 ORTHO05D008644 0.0e+00 1413.7 684 100.0
Nitab4.5_0012039g0010 Nicotiana tabacum HOM05D006576 ORTHO05D008644 0.0e+00 1313.9 646 98.0
Peaxi162Scf00690g00125 Petunia axillaris HOM05D006576 ORTHO05D008644 0.0e+00 1255.7 651 92.8
Solyc04g080140.4 Solanum lycopersicum HOM05D006576 ORTHO05D008644 0.0e+00 1224.9 651 90.3
CAN.G1126.39 Capsicum annuum HOM05D006576 ORTHO05D008644 0.0e+00 1223.4 647 91.0
Sopen04g033720 Solanum pennellii HOM05D006576 ORTHO05D008644 0.0e+00 1206.0 640 90.3
Cc10_g03100 Coffea canephora HOM05D006576 ORTHO05D008644 0.0e+00 1125.2 651 80.8
MSTRG.25158 Avicennia marina HOM05D006576 ORTHO05D008644 0.0e+00 1105.1 651 79.7
CSS0022363 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 0.0e+00 1097.0 723 74.4
Thecc.08G024000 Theobroma cacao HOM05D006576 ORTHO05D008644 0.0e+00 1097.0 649 77.8
Hma1.2p1_0203F.1_g086540 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 0.0e+00 1090.5 648 78.5
Migut.C00705 Erythranthe guttata HOM05D006576 ORTHO05D008644 0.0e+00 1089.7 651 78.5
HanXRQChr04g0105541 Helianthus annuus HOM05D006576 ORTHO05D008644 0.0e+00 1086.6 651 78.8
Glyma.06G033200 Glycine max HOM05D006576 ORTHO05D008644 0.0e+00 1085.1 651 77.1
Gorai.002G129100 Gossypium raimondii HOM05D006576 ORTHO05D008644 0.0e+00 1084.7 651 76.2
Rhsim06G0035200 Rhododendron simsii HOM05D006576 ORTHO05D008644 0.0e+00 1081.6 682 76.2
Lalb_Chr11g0062371 Lupinus albus HOM05D006576 ORTHO05D008644 0.0e+00 1081.2 652 77.6
Gohir.A01G116700 Gossypium hirsutum HOM05D006576 ORTHO05D008644 0.0e+00 1080.9 651 76.3
Gohir.D01G105100 Gossypium hirsutum HOM05D006576 ORTHO05D008644 0.0e+00 1080.1 640 77.0
Lj4A42T76 Lonicera japonica HOM05D006576 ORTHO05D008644 0.0e+00 1079.3 663 77.8
TAR381G1568 Trochodendron aralioides HOM05D006576 ORTHO05D008644 0.0e+00 1076.6 652 76.5
Lj1g0002309 Lotus japonicus HOM05D006576 ORTHO05D008644 0.0e+00 1076.2 651 76.8
RcHm_v2.0_Chr6g0300731 Rosa chinensis HOM05D006576 ORTHO05D008644 4.7e-312 1074.7 651 76.2
arahy.Tifrunner.gnm1.ann1.G51JN1 Arachis hypogaea HOM05D006576 ORTHO05D008644 4.7e-312 1073.9 651 76.5
arahy.Tifrunner.gnm1.ann1.N2LUF1 Arachis hypogaea HOM05D006576 ORTHO05D008644 4.7e-312 1073.5 651 76.7
Manes.11G048300 Manihot esculenta HOM05D006576 ORTHO05D008644 4.7e-312 1073.5 653 77.0
Phvul.009G056900 Phaseolus vulgaris HOM05D006576 ORTHO05D008644 9.4e-312 1072.8 651 76.0
SGA_v2.0_scaffold24G10239 Striga asiatica HOM05D006576 ORTHO05D008644 9.4e-312 1072.8 665 77.0
SalBow7G4023 Salvia bowleyana HOM05D006576 ORTHO05D008644 1.4e-311 1072.4 669 76.2
MD15G1029800 Malus domestica HOM05D006576 ORTHO05D008644 1.9e-311 1072.0 651 75.4
Ciclev10003149m.g Citrus clementina HOM05D006576 ORTHO05D008644 2.3e-311 1071.6 651 76.3
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 5.6e-311 1070.5 648 75.9
CsaV3_3G044990 Cucumis sativus L. HOM05D006576 ORTHO05D008644 1.8e-309 1065.4 650 76.5
FvH4_2g40020 Fragaria vesca HOM05D006576 ORTHO05D008644 1.8e-309 1065.4 651 75.3
CSS0029857 Camellia sinensis var. sinensis HOM05D006576 ORTHO05D008644 3.0e-309 1064.7 604 83.8
MD08G1033200 Malus domestica HOM05D006576 ORTHO05D008644 3.0e-309 1064.7 651 75.1
ClCG05G019150 Citrullus lanatus HOM05D006576 ORTHO05D008644 1.1e-308 1062.8 651 75.9
Sed0024937 Sechium edule HOM05D006576 ORTHO05D008644 1.9e-308 1062.0 650 76.0
Lsat_1_v5_gn_1_17900 Lactuca sativa HOM05D006576 ORTHO05D008644 4.3e-308 1060.8 648 77.2
Actinidia15312 Actinidia chinensis HOM05D006576 ORTHO05D008644 7.4e-308 1060.1 620 80.3
DCAR_019521 Daucus carota HOM05D006576 ORTHO05D008644 4.8e-307 1057.4 652 77.0
MELO3C003867.2 Cucumis melo HOM05D006576 ORTHO05D008644 6.2e-307 1057.0 650 75.7
FAN27G3021 Fragaria x ananassa HOM05D006576 ORTHO05D008644 8.2e-307 1056.6 651 74.7
QL02p007885 Quercus lobata HOM05D006576 ORTHO05D008644 8.2e-307 1056.6 697 72.3
Ca_15522_v3 Cicer arietinum L. HOM05D006576 ORTHO05D008644 3.1e-306 1054.7 648 75.8
Medtr3g111730 Medicago truncatula HOM05D006576 ORTHO05D008644 3.1e-306 1054.7 652 75.0
ECA247G3618 Erigeron canadensis HOM05D006576 ORTHO05D008644 6.9e-306 1053.5 620 80.2
TWI36G0276 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 1.5e-305 1052.4 651 74.5
Prupe.1G381700 Prunus persica HOM05D006576 ORTHO05D008644 2.0e-305 1052.0 651 75.3
Cpa.g.sc64.67 Carica papaya HOM05D006576 ORTHO05D008644 7.6e-305 1050.0 641 76.0
Potri.014G180700 Populus trichocarpa HOM05D006576 ORTHO05D008644 4.9e-304 1047.3 654 75.2
COL.COLO4_26345 Corchorus olitorius HOM05D006576 ORTHO05D008644 1.1e-303 1046.2 640 75.9
CiPaw.16G055000 Carya illinoinensis HOM05D006576 ORTHO05D008644 1.9e-303 1045.4 648 75.5
Hund26593 Selenicereus undatus HOM05D006576 ORTHO05D008644 1.2e-302 1042.7 648 74.2
TWI12G0537 Tripterygium wilfordii HOM05D006576 ORTHO05D008644 2.1e-302 1042.0 652 73.9
GSVIVG01009681001 Vitis vinifera HOM05D006576 ORTHO05D008644 5.1e-301 1037.3 639 75.6
Atru.BG.235.p Acer truncatum HOM05D006576 ORTHO05D008644 8.7e-301 1036.6 639 75.9
PGR083G0445 Punica granatum HOM05D006576 ORTHO05D008644 1.1e-300 1036.2 652 74.1
THA.LOC104822840 Tarenaya hassleriana HOM05D006576 ORTHO05D008644 1.1e-300 1036.2 652 75.3
vmacro21626 Vaccinium macrocarpon HOM05D006576 ORTHO05D008644 1.3e-299 1032.7 787 65.9
Nn1g05071 Nelumbo nucifera HOM05D006576 ORTHO05D008644 2.2e-299 1031.9 653 73.7
Sabra14G0140900 Salix brachista HOM05D006576 ORTHO05D008644 9.0e-298 1026.5 643 74.7
Psat0s4808g0040 Pisum sativum HOM05D006576 ORTHO05D008644 2.2e-296 1021.9 671 71.1
Atru.chr13.516 Acer truncatum HOM05D006576 ORTHO05D008644 1.9e-295 1018.8 640 74.5
EL10Ac1g01831 Beta vulgaris HOM05D006576 ORTHO05D008644 1.9e-295 1018.8 647 72.6
Glyma.04G033200 Glycine max HOM05D006576 ORTHO05D008644 5.1e-293 1010.7 594 77.8
AUR62033848 Chenopodium quinoa HOM05D006576 ORTHO05D008644 2.5e-292 1008.4 651 71.7
Ah.05g167470 Amaranthus hybridus HOM05D006576 ORTHO05D008644 5.7e-292 1007.3 651 70.8
Aqoxy6G01046 Aquilegia oxysepala HOM05D006576 ORTHO05D008644 2.2e-291 1005.4 652 71.9
FAN20G0603 Fragaria x ananassa HOM05D006576 ORTHO05D008644 8.2e-291 1003.4 651 71.6
Sp1g33910 Schrenkiella parvula HOM05D006576 ORTHO05D008644 4.1e-290 1001.1 651 72.2
Haze_17991 Corylus avellana HOM05D006576 ORTHO05D008644 9.1e-290 1000.0 812 61.0
Thhalv10011304m.g Eutrema salsugineum HOM05D006576 ORTHO05D008644 1.3e-288 996.1 651 71.6
Carub.0001s3555 Capsella rubella HOM05D006576 ORTHO05D008644 5.0e-288 994.2 638 72.9
BcaB04g17577 Brassica carinata HOM05D006576 ORTHO05D008644 8.5e-288 993.4 644 72.0
AT1G45150 Arabidopsis thaliana HOM05D006576 ORTHO05D008644 1.1e-287 993.0 651 72.0
Eucgr.F01554 Eucalyptus grandis HOM05D006576 ORTHO05D008644 1.1e-287 993.0 656 71.5
A08p06220 Brassica napus HOM05D006576 ORTHO05D008644 1.4e-287 992.6 651 71.6
BraA08t32625Z Brassica rapa HOM05D006576 ORTHO05D008644 1.4e-287 992.6 651 71.6
BcaC07g37274 Brassica carinata HOM05D006576 ORTHO05D008644 1.3e-283 979.5 651 71.1
C08p07030 Brassica napus HOM05D006576 ORTHO05D008644 1.3e-283 979.5 651 71.1
BolC8t47545H Brassica oleracea HOM05D006576 ORTHO05D008644 1.3e-283 979.5 651 71.1
PSO675G1390 Papaver somniferum HOM05D006576 ORTHO05D008644 2.6e-281 971.8 659 69.5
ATR0733G192 Amborella trichopoda HOM05D006576 ORTHO05D008644 2.6e-276 955.3 651 68.7
PSO541G0394 Papaver somniferum HOM05D006576 ORTHO05D008644 1.5e-271 939.5 647 68.9
CANSAT25G2025 Cannabis sativa HOM05D006576 ORTHO05D008644 7.2e-271 937.2 598 73.6
Os07g0581300 Oryza sativa ssp. japonica HOM05D006576 ORTHO05D008644 1.8e-269 932.6 644 67.7
FAN15G1632 Fragaria x ananassa HOM05D006576 ORTHO05D008644 7.5e-268 927.2 639 69.2
Duzib093G2111 Durio zibethinus HOM05D006576 ORTHO05D008644 4.5e-265 917.9 652 67.3
AL1G52790 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 2.0e-260 902.5 560 74.6
Zm00001eb107720 Zea mays HOM05D006576 ORTHO05D008644 1.1e-250 870.2 594 68.4
Sc02g0006340 Simmondsia chinensis HOM05D006576 ORTHO05D008644 3.2e-250 868.6 564 71.5
CDE04G1970 Ceratophyllum demersum HOM05D006576 ORTHO05D008644 1.0e-240 837.0 577 67.8
Mapoly0015s0075 Marchantia polymorpha HOM05D006576 ORTHO05D008644 6.8e-237 824.3 640 60.2
Pp3c21_15170 Physcomitrium patens HOM05D006576 ORTHO05D008644 1.7e-232 809.7 656 59.3
SMO367G0262 Selaginella moellendorffii HOM05D006576 ORTHO05D008644 4.4e-228 795.0 645 58.4
Hma1.2p1_0203F.1_g086550 Hydrangea macrophylla HOM05D006576 ORTHO05D008644 2.8e-206 722.6 513 68.2
CARHR036240 Cardamine hirsuta HOM05D006576 ORTHO05D008644 1.6e-182 643.7 365 79.5
Dinv36060 Davidia involucrata HOM05D006576 ORTHO05D008644 1.1e-175 620.9 378 78.8
Oeu005363.1 Olea europaea HOM05D006576 ORTHO05D008644 7.9e-169 598.2 382 76.2
unitig_578.g16727 Utricularia gibba HOM05D006576 ORTHO05D008644 1.1e-167 594.3 564 55.5
AUR62041679 Chenopodium quinoa HOM05D006576 ORTHO05D008644 3.7e-150 536.2 380 67.4
CBR_g55233 Chara braunii HOM05D006576 ORTHO05D008644 1.2e-137 494.6 540 48.5
AUR62041680 Chenopodium quinoa HOM05D006576 ORTHO05D008644 1.2e-116 424.9 235 78.7
CBR_g6514 Chara braunii HOM05D006576 ORTHO05D008644 1.7e-78 298.1 747 31.1
SEGI_38008 Sequoiadendron giganteum HOM05D006576 ORTHO05D008644 1.2e-71 275.4 146 81.5
SHI46795 Sapria himalayana HOM05D006576 ORTHO05D008644 5.5e-69 266.5 250 57.6
Lsat_1_v5_gn_3_960 Lactuca sativa HOM05D006576 ORTHO05D008644 4.4e-58 230.3 211 55.5
Nn7g38200 Nelumbo nucifera HOM05D006576 ORTHO05D008644 1.4e-27 129.0 72 83.3
Nn2g14734 Nelumbo nucifera HOM05D006576 ORTHO05D008644 2.3e-27 128.3 73 80.8
Atru.chr11.1906 Acer truncatum HOM05D006576 ORTHO05D008644 1.2e-23 115.9 75 65.3
MBI18_g06878_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 8.0e-20 103.2 70 67.1
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 1.4e-19 102.4 94 58.5
MBI18_g09633_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 5.2e-19 100.5 71 63.4
MBI13_g29621_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 2.2e-17 95.1 70 62.9
CBR_g55378 Chara braunii HOM05D006576 ORTHO05D028753 2.9e-17 94.7 95 51.6
Zm00001eb326440 Zea mays HOM05D006576 ORTHO05D028753 2.9e-17 94.7 66 69.7
Zm00001eb361570 Zea mays HOM05D006576 ORTHO05D028753 2.9e-17 94.7 66 69.7
Zm00001eb377960 Zea mays HOM05D006576 ORTHO05D028753 2.9e-17 94.7 66 69.7
MD05G1053300 Malus domestica HOM05D006576 ORTHO05D248938 1.4e-16 92.4 71 59.2
Zm00001eb171910 Zea mays HOM05D000538 ORTHO05D003297 5.0e-14 84.0 107 44.9
AL4G26800 Arabidopsis lyrata HOM05D006576 ORTHO05D008644 1.8e-11 75.5 95 46.3
MBI18_g23781_MAGBIO Magnolia biondii HOM05D006576 ORTHO05D008644 1.2e-10 72.8 35 88.6
Zm00001eb147180 Zea mays HOM05D014217 ORTHO05D000496 4.1e-08 64.3 69 47.8
Zm00001eb413530 Zea mays HOM05D014217 ORTHO05D000496 4.6e-07 60.8 64 48.4


User provided reference genes

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