Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 1.7e-249 865.5 429 100.0
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 5.6e-205 717.6 378 92.9
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 8.5e-185 650.6 378 85.2
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 1.9e-184 649.4 378 83.9
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 4.6e-183 644.8 378 83.6
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 7.4e-173 610.9 386 78.8
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 1.7e-169 599.7 379 79.2
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 4.2e-144 515.4 378 66.4
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 6.3e-140 501.5 376 66.0
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 1.1e-136 490.7 373 63.8
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 3.1e-134 482.6 370 62.2
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 5.8e-133 478.4 378 61.9
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 3.7e-132 475.7 375 63.2
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 1.1e-131 474.2 382 63.9
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 2.7e-130 469.5 396 60.6
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 1.9e-128 463.4 379 62.0
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 4.7e-127 458.8 391 61.1
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 2.3e-126 456.4 405 61.0
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 2.3e-126 456.4 405 61.0
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 2.6e-125 453.0 373 63.0
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 2.6e-125 453.0 340 67.1
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 3.4e-125 452.6 372 61.6
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 4.4e-125 452.2 371 61.5
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.3e-124 450.7 372 59.1
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.7e-124 450.3 385 60.8
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 1.1e-123 447.6 379 59.6
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.9e-123 446.8 372 58.6
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 2.4e-123 446.4 374 59.1
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 5.4e-123 445.3 372 58.6
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.2e-122 444.1 374 60.7
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 3.0e-121 439.5 372 58.6
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 6.6e-121 438.3 385 57.4
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 2.5e-120 436.4 376 59.8
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 5.6e-120 435.3 385 56.9
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 3.1e-118 429.5 384 59.1
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 4.0e-118 429.1 372 58.9
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 6.8e-118 428.3 378 57.9
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 8.9e-118 427.9 378 58.7
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 1.2e-117 427.6 369 59.3
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 9.9e-117 424.5 373 55.2
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 2.9e-116 422.9 499 49.1
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 8.3e-116 421.4 385 55.8
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 8.3e-116 421.4 371 58.5
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 4.1e-115 419.1 387 56.6
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 7.1e-115 418.3 368 55.4
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.7e-113 413.7 384 55.5
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 3.0e-113 412.9 380 55.3
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 6.6e-113 411.8 381 56.7
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 4.3e-112 409.1 374 56.7
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 5.6e-112 408.7 372 54.0
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 5.6e-112 408.7 374 58.0
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 9.5e-112 407.9 380 56.8
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 9.5e-112 407.9 386 56.0
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 1.6e-111 407.1 376 56.4
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 4.7e-111 405.6 390 55.6
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 4.7e-111 405.6 382 55.0
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 8.9e-110 401.4 399 53.9
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 4.4e-109 399.1 374 56.4
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 3.8e-108 396.0 374 55.6
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 9.2e-107 391.3 384 52.9
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 1.2e-106 391.0 380 53.2
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 7.8e-106 388.3 368 53.3
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 1.0e-105 387.9 397 50.1
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 2.5e-104 383.3 351 55.3
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 2.8e-103 379.8 374 51.1
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 4.8e-103 379.0 376 53.5
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 8.1e-103 378.3 381 52.8
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 2.4e-102 376.7 376 53.2
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 6.9e-102 375.2 376 52.7
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 6.9e-102 375.2 371 53.6
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 9.0e-102 374.8 369 50.9
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 4.4e-101 372.5 373 53.1
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 4.4e-101 372.5 337 54.6
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 5.8e-101 372.1 381 53.3
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 9.9e-101 371.3 377 52.0
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 3.8e-100 369.4 378 50.5
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 1.9e-99 367.1 375 51.5
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 4.2e-99 365.9 282 62.1
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 5.4e-99 365.5 353 56.4
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 9.3e-99 364.8 372 50.3
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 2.7e-98 363.2 372 50.5
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 1.7e-97 360.5 374 51.6
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.1e-96 357.8 372 49.5
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.4e-94 350.9 380 50.3
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 2.9e-92 343.2 369 51.8
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 6.0e-90 335.5 398 47.5
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 3.7e-87 326.2 338 54.4
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 1.8e-86 323.9 399 46.9
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 3.8e-84 316.2 321 50.8
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 4.9e-84 315.8 380 45.8
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 2.1e-82 310.5 373 45.6
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 5.1e-81 305.8 353 46.2
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.5e-77 292.7 353 45.3
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 4.2e-75 286.2 376 41.8
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 4.1e-70 269.6 382 41.4
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 3.2e-67 260.0 389 40.6
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.4e-65 254.6 252 48.8
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 1.1e-62 245.0 260 48.8
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 2.3e-57 227.3 161 64.0
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 1.1e-48 198.4 226 50.0
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 2.0e-48 197.6 227 52.0
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 9.1e-46 188.7 156 55.1
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 1.7e-44 184.5 228 42.1
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 1.3e-39 168.3 152 52.0
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 9.8e-32 142.1 154 56.5
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 5.0e-28 129.8 155 47.1
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 2.0e-24 117.9 94 76.6
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 1.7e-23 114.8 83 63.9
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 1.7e-20 104.8 173 41.0
CDE01G0194 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 3.7e-07 60.5 50 60.0


User provided reference genes

Program Settings