Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000110g0140 Nicotiana tabacum HOM05D007639 ORTHO05D009509 5.5e-82 309.7 243 100.0
Nitab4.5_0006518g0030 Nicotiana tabacum HOM05D007639 ORTHO05D009509 1.1e-37 162.5 83 98.8
CAN.G371.124 Capsicum annuum HOM05D007639 ORTHO05D009509 1.7e-27 128.6 83 72.3
Peaxi162Scf00057g00149 Petunia axillaris HOM05D000909 ORTHO05D009509 2.3e-27 128.3 83 77.1
Sopen04g033420 Solanum pennellii HOM05D007639 ORTHO05D009509 6.6e-27 126.7 83 73.5
Solyc04g079850.2 Solanum lycopersicum HOM05D007639 ORTHO05D009509 3.3e-26 124.4 83 72.3
CAN.G371.126 Capsicum annuum HOM05D007639 ORTHO05D009509 7.3e-26 123.2 83 69.9
SalBow7G0144 Salvia bowleyana HOM05D007639 ORTHO05D009509 1.8e-16 92.0 80 50.0
Dinv39377 Davidia involucrata HOM05D007639 ORTHO05D009509 3.1e-16 91.3 81 54.3
Oeu009601.2 Olea europaea HOM05D007639 ORTHO05D009509 2.6e-15 88.2 81 50.6
SalBow7G4426 Salvia bowleyana HOM05D007639 ORTHO05D009509 3.4e-15 87.8 80 48.8
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 1.3e-14 85.9 81 46.9
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 2.2e-14 85.1 81 45.7
Lj4C46T20 Lonicera japonica HOM05D007639 ORTHO05D009509 1.4e-13 82.4 83 50.6
Manes.05G164100 Manihot esculenta HOM05D007639 ORTHO05D009509 2.4e-13 81.6 83 49.4
Cfa018449 Carpinus fangiana HOM05D007639 ORTHO05D009509 9.3e-13 79.7 83 47.0
Migut.L00762 Erythranthe guttata HOM05D007639 ORTHO05D009509 1.2e-12 79.3 81 43.2
Potri.014G040200 Populus trichocarpa HOM05D007639 ORTHO05D009509 2.1e-12 78.6 72 55.6
Haze_17619 Corylus avellana HOM05D007639 ORTHO05D009509 2.7e-12 78.2 81 48.1
TWI60G0667 Tripterygium wilfordii HOM05D007639 ORTHO05D009509 2.7e-12 78.2 83 50.6
GSVIVG01009638001 Vitis vinifera HOM05D007639 ORTHO05D009509 1.8e-11 75.5 80 47.5
DCAR_008778 Daucus carota HOM05D007639 ORTHO05D009509 2.3e-11 75.1 81 49.4
THA.LOC104813851 Tarenaya hassleriana HOM05D007639 ORTHO05D009509 3.0e-11 74.7 80 43.8
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 2.5e-10 71.6 84 39.3
Cpa.g.sc207.2 Carica papaya HOM05D007639 ORTHO05D009509 4.3e-10 70.9 81 44.4
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 4.3e-10 70.9 79 41.8
QL09p028535 Quercus lobata HOM05D007639 ORTHO05D009509 5.6e-10 70.5 83 42.2
TAR625G1528 Trochodendron aralioides HOM05D007639 ORTHO05D009509 5.6e-10 70.5 82 42.7
AT1G19290 Arabidopsis thaliana HOM05D007639 ORTHO05D009509 2.1e-09 68.6 85 44.7
CARHR019880 Cardamine hirsuta HOM05D007639 ORTHO05D009509 2.1e-09 68.6 83 47.0
Prupe.1G585600 Prunus persica HOM05D007639 ORTHO05D009509 3.7e-09 67.8 80 41.2
Lsat_1_v5_gn_4_37641 Lactuca sativa HOM05D007639 ORTHO05D009509 6.2e-09 67.0 78 39.7
Nn4g24966 Nelumbo nucifera HOM05D007639 ORTHO05D009509 1.1e-08 66.2 78 44.9
AL1G31880 Arabidopsis lyrata HOM05D007639 ORTHO05D009509 1.4e-08 65.9 85 43.5
CiPaw.15G071600 Carya illinoinensis HOM05D007639 ORTHO05D009509 1.8e-08 65.5 78 44.9
Duzib093G1018 Durio zibethinus HOM05D007639 ORTHO05D009509 1.8e-08 65.5 76 46.1
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 1.8e-08 65.5 83 39.8
Psat1g020640 Pisum sativum HOM05D007639 ORTHO05D009509 1.8e-08 65.5 79 43.0
Thhalv10006776m.g Eutrema salsugineum HOM05D007639 ORTHO05D009509 2.4e-08 65.1 83 45.8
Lj6g0022088 Lotus japonicus HOM05D007639 ORTHO05D009509 2.4e-08 65.1 80 41.2
PSO541G4055 Papaver somniferum HOM05D007639 ORTHO05D009509 3.1e-08 64.7 80 45.0
Sp1g17190 Schrenkiella parvula HOM05D007639 ORTHO05D009509 3.1e-08 64.7 82 45.1
Aqoxy6G01002 Aquilegia oxysepala HOM05D007639 ORTHO05D009509 4.0e-08 64.3 80 42.5
Carub.0001s1888 Capsella rubella HOM05D007639 ORTHO05D009509 5.3e-08 63.9 85 43.5
FvH4_2g40380 Fragaria vesca HOM05D007639 ORTHO05D009509 5.3e-08 63.9 77 45.5
Gohir.A05G197000 Gossypium hirsutum HOM05D007639 ORTHO05D009509 6.9e-08 63.5 78 42.3
RcHm_v2.0_Chr6g0300361 Rosa chinensis HOM05D007639 ORTHO05D009509 6.9e-08 63.5 82 42.7
Ciclev10003562m.g Citrus clementina HOM05D007639 ORTHO05D009509 9.0e-08 63.2 76 44.7
Lalb_Chr23g0275911 Lupinus albus HOM05D007639 ORTHO05D009509 9.0e-08 63.2 79 43.0
TPR.G34687 Trifolium pratense HOM05D007639 ORTHO05D009509 9.0e-08 63.2 48 58.3
PSO675G4860 Papaver somniferum HOM05D007639 ORTHO05D009509 1.2e-07 62.8 80 42.5
Gohir.D05G200100 Gossypium hirsutum HOM05D007639 ORTHO05D009509 2.0e-07 62.0 75 45.3
Gorai.009G205400 Gossypium raimondii HOM05D007639 ORTHO05D009509 3.4e-07 61.2 75 45.3
Thecc.08G021400 Theobroma cacao HOM05D007639 ORTHO05D009509 3.4e-07 61.2 41 65.9
Psat3g155040 Pisum sativum HOM05D000871 ORTHO05D000770 4.5e-07 60.8 80 38.8
Psat3g180320 Pisum sativum HOM05D007639 ORTHO05D009509 4.5e-07 60.8 80 38.8
Ca_02594_v3 Cicer arietinum L. HOM05D007639 ORTHO05D009509 5.8e-07 60.5 78 41.0
BraA08t34924Z Brassica rapa HOM05D007639 ORTHO05D009509 7.6e-07 60.1 85 40.0
Glyma.09G089200 Glycine max HOM05D007639 ORTHO05D009509 7.6e-07 60.1 48 56.2
Medtr2g049740 Medicago truncatula HOM05D007639 ORTHO05D009509 1.0e-06 59.7 79 39.2
Actinidia05689 Actinidia chinensis HOM05D007639 ORTHO05D009509 1.3e-06 59.3 137 30.7
COL.COLO4_26382 Corchorus olitorius HOM05D007639 ORTHO05D009509 1.3e-06 59.3 42 61.9
Glyma.15G197000 Glycine max HOM05D007639 ORTHO05D009509 1.7e-06 58.9 80 38.8
CsaV3_3G044860 Cucumis sativus L. HOM05D007639 ORTHO05D009509 2.2e-06 58.5 85 37.6
A08p29890 Brassica napus HOM05D007639 ORTHO05D009509 2.9e-06 58.2 85 38.8
BcaC07g38995 Brassica carinata HOM05D007639 ORTHO05D009509 4.9e-06 57.4 85 38.8
BolC8t49556H Brassica oleracea HOM05D007639 ORTHO05D009509 4.9e-06 57.4 85 38.8
AUR62034326 Chenopodium quinoa HOM05D007639 ORTHO05D009509 6.5e-06 57.0 80 40.0


User provided reference genes

Program Settings