Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000109g0130 Nicotiana tabacum HOM05D007271 ORTHO05D009217 0.0e+00 1080.9 544 100.0
Nitab4.5_0005761g0060 Nicotiana tabacum HOM05D007271 ORTHO05D009217 2.8e-302 1041.2 545 96.0
Peaxi162Scf00185g01619 Petunia axillaris HOM05D007271 ORTHO05D009217 6.3e-270 933.7 547 86.3
PGSC0003DMG400035874 Solanum tuberosum HOM05D007271 ORTHO05D009217 2.1e-236 822.4 554 74.4
CAN.G773.8 Capsicum annuum HOM05D007271 ORTHO05D009217 7.8e-236 820.5 554 74.4
Peaxi162Scf00408g00227 Petunia axillaris HOM05D007271 ORTHO05D009217 1.1e-234 816.6 553 73.4
Sopen08g024690 Solanum pennellii HOM05D007271 ORTHO05D009217 3.6e-233 811.6 554 74.0
Solyc08g076040.2 Solanum lycopersicum HOM05D007271 ORTHO05D009217 6.2e-233 810.8 554 74.0
Oeu061071.1 Olea europaea HOM05D007271 ORTHO05D009217 5.7e-194 681.4 509 66.8
Dinv29036 Davidia involucrata HOM05D007271 ORTHO05D009217 9.1e-192 674.1 521 65.6
Cc08_g04070 Coffea canephora HOM05D007271 ORTHO05D009217 3.0e-187 659.1 546 60.1
Hma1.2p1_0635F.1_g193160 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 8.8e-187 657.5 499 64.7
Lj8A323T49 Lonicera japonica HOM05D007271 ORTHO05D009217 3.3e-186 655.6 548 59.1
Oeu001193.1 Olea europaea HOM05D007271 ORTHO05D009217 9.7e-178 627.5 529 59.7
SalBow4G2871 Salvia bowleyana HOM05D007271 ORTHO05D009217 1.7e-177 626.7 496 63.1
DCAR_004256 Daucus carota HOM05D007271 ORTHO05D009217 2.2e-174 616.3 488 61.5
GSVIVG01026362001 Vitis vinifera HOM05D007271 ORTHO05D009217 1.1e-173 614.0 504 59.1
DCAR_008194 Daucus carota HOM05D007271 ORTHO05D009217 4.4e-170 602.1 489 59.7
TAR375G0504 Trochodendron aralioides HOM05D007271 ORTHO05D009217 4.4e-170 602.1 514 59.1
CiPaw.12G070300 Carya illinoinensis HOM05D007271 ORTHO05D009217 1.5e-165 587.0 528 57.2
PGR042G3154 Punica granatum HOM05D007271 ORTHO05D009217 1.9e-165 586.6 494 55.7
Eucgr.E01257 Eucalyptus grandis HOM05D007271 ORTHO05D009217 1.6e-164 583.6 508 55.9
Haze_08102 Corylus avellana HOM05D007271 ORTHO05D009217 1.8e-163 580.1 502 57.2
Prupe.5G024200 Prunus persica HOM05D007271 ORTHO05D009217 6.8e-163 578.2 498 59.0
RcHm_v2.0_Chr7g0212901 Rosa chinensis HOM05D007271 ORTHO05D009217 5.7e-162 575.1 505 57.2
FvH4_5g23600 Fragaria vesca HOM05D007271 ORTHO05D009217 1.4e-160 570.5 505 56.2
SalBow8G4630 Salvia bowleyana HOM05D007271 ORTHO05D009217 1.8e-160 570.1 495 56.2
FAN18G2511 Fragaria x ananassa HOM05D007271 ORTHO05D009217 4.1e-160 568.9 505 56.0
FAN18G2097 Fragaria x ananassa HOM05D007271 ORTHO05D009217 4.5e-159 565.5 505 55.8
MD00G1000300 Malus domestica HOM05D007271 ORTHO05D009217 4.5e-159 565.5 507 56.0
FAN13G0287 Fragaria x ananassa HOM05D007271 ORTHO05D009217 7.7e-159 564.7 504 55.8
FAN08G2102 Fragaria x ananassa HOM05D007271 ORTHO05D009217 1.0e-158 564.3 504 56.0
Nitab4.5_0000809g0020 Nicotiana tabacum HOM05D007271 ORTHO05D009217 1.9e-157 560.1 433 68.1
Aqoxy7G00878 Aquilegia oxysepala HOM05D007271 ORTHO05D009217 7.2e-157 558.1 513 55.6
Cfa012560 Carpinus fangiana HOM05D007271 ORTHO05D009217 8.0e-156 554.7 528 53.4
Lsat_1_v5_gn_3_20940 Lactuca sativa HOM05D007271 ORTHO05D009217 3.0e-155 552.7 477 56.4
CANSAT21G2130 Cannabis sativa HOM05D007271 ORTHO05D009217 9.8e-154 547.7 513 55.2
HanXRQChr17g0537681 Helianthus annuus HOM05D007271 ORTHO05D009217 2.8e-153 546.2 542 51.3
MBI04_g36029_MAGBIO Magnolia biondii HOM05D007271 ORTHO05D009217 4.9e-153 545.4 508 53.1
Ciclev10003885m.g Citrus clementina HOM05D007271 ORTHO05D009217 1.1e-152 544.3 515 52.8
Duzib068G0217 Durio zibethinus HOM05D007271 ORTHO05D009217 1.4e-152 543.9 545 51.6
Thecc.03G314300 Theobroma cacao HOM05D007271 ORTHO05D009217 4.1e-152 542.3 503 54.5
Lalb_Chr05g0215551 Lupinus albus HOM05D007271 ORTHO05D009217 1.2e-151 540.8 515 54.6
Potri.001G133700 Populus trichocarpa HOM05D007271 ORTHO05D009217 1.6e-151 540.4 501 54.3
Hma1.2p1_1486F.1_g286550 Hydrangea macrophylla HOM05D007271 ORTHO05D009217 5.0e-150 535.4 404 64.6
VMungo1215G2496 Vigna mungo HOM05D007271 ORTHO05D009217 1.5e-149 533.9 524 52.9
Manes.17G011200 Manihot esculenta HOM05D007271 ORTHO05D009217 5.6e-149 531.9 485 55.5
Ca_25147_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 7.3e-149 531.6 498 54.2
Eucgr.D02621 Eucalyptus grandis HOM05D007271 ORTHO05D009217 1.2e-148 530.8 484 53.5
Gohir.D12G206700 Gossypium hirsutum HOM05D007271 ORTHO05D009217 1.8e-147 526.9 496 54.4
Gorai.008G222100 Gossypium raimondii HOM05D007271 ORTHO05D009217 2.3e-147 526.6 496 54.4
Atru.chr6.1575 Acer truncatum HOM05D007271 ORTHO05D009217 3.1e-147 526.2 515 52.2
Gohir.A12G204300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 4.0e-147 525.8 493 54.6
Lj2g0009393 Lotus japonicus HOM05D007271 ORTHO05D009217 4.0e-147 525.8 532 52.4
Medtr5g027460 Medicago truncatula HOM05D007271 ORTHO05D009217 1.2e-146 524.2 502 52.8
TWI14G0446 Tripterygium wilfordii HOM05D007271 ORTHO05D009217 1.2e-146 524.2 485 53.2
Glyma.01G009700 Glycine max HOM05D007271 ORTHO05D009217 1.5e-146 523.9 503 54.5
Actinidia14763 Actinidia chinensis HOM05D007271 ORTHO05D009217 3.4e-146 522.7 505 53.1
unitig_748.g8136 Utricularia gibba HOM05D007271 ORTHO05D009217 2.9e-145 519.6 518 51.5
unitig_747.g21928 Utricularia gibba HOM05D007271 ORTHO05D009217 6.4e-145 518.5 491 54.0
Lj4g0015364 Lotus japonicus HOM05D007271 ORTHO05D009217 8.3e-145 518.1 531 50.7
Gorai.004G180600 Gossypium raimondii HOM05D007271 ORTHO05D009217 9.2e-144 514.6 499 52.3
Psat2g139720 Pisum sativum HOM05D007271 ORTHO05D009217 6.0e-143 511.9 514 51.8
Gohir.D08G173300 Gossypium hirsutum HOM05D007271 ORTHO05D009217 6.6e-142 508.4 499 51.7
ClCG10G001150 Citrullus lanatus HOM05D007271 ORTHO05D009217 1.1e-141 507.7 507 50.7
Cpa.g.sc104.82 Carica papaya HOM05D007271 ORTHO05D009217 1.9e-141 506.9 512 50.6
Gohir.A08G152200 Gossypium hirsutum HOM05D007271 ORTHO05D009217 3.7e-137 492.7 499 50.5
MELO3C013807.2 Cucumis melo HOM05D007271 ORTHO05D009217 8.3e-137 491.5 507 49.7
Migut.A00579 Erythranthe guttata HOM05D007271 ORTHO05D009217 1.1e-136 491.1 494 53.4
PSO717G0049 Papaver somniferum HOM05D007271 ORTHO05D009217 5.4e-136 488.8 507 49.7
PGR031G3520 Punica granatum HOM05D007271 ORTHO05D009217 3.9e-134 482.6 475 52.0
Glyma.16G103000 Glycine max HOM05D007271 ORTHO05D009217 6.6e-134 481.9 507 49.3
CsaV3_3G001170 Cucumis sativus L. HOM05D007271 ORTHO05D009217 1.1e-133 481.1 506 49.2
Phvul.002G132600 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 1.2e-132 477.6 436 55.5
arahy.Tifrunner.gnm1.ann1.3Y0Q41 Arachis hypogaea HOM05D007271 ORTHO05D009217 4.7e-132 475.7 475 50.3
arahy.Tifrunner.gnm1.ann1.CI81A0 Arachis hypogaea HOM05D007271 ORTHO05D009217 2.4e-128 463.4 475 50.3
QL12p000436 Quercus lobata HOM05D007271 ORTHO05D009217 7.1e-128 461.8 432 55.6
ECA246G0509 Erigeron canadensis HOM05D007271 ORTHO05D009217 4.6e-127 459.1 548 45.4
Phvul.003G273200 Phaseolus vulgaris HOM05D007271 ORTHO05D009217 1.3e-126 457.6 457 49.0
Sed0019673 Sechium edule HOM05D007271 ORTHO05D009217 6.6e-126 455.3 505 47.5
Medtr8g071050 Medicago truncatula HOM05D007271 ORTHO05D009217 1.5e-125 454.1 454 48.9
Os06g0113900 Oryza sativa ssp. japonica HOM05D007271 ORTHO05D009217 7.3e-125 451.8 522 47.3
Psat4g109960 Pisum sativum HOM05D007271 ORTHO05D009217 1.6e-124 450.7 459 48.6
Zm00001eb268890 Zea mays HOM05D007271 ORTHO05D009217 1.1e-123 448.0 503 47.9
TPR.G28964 Trifolium pratense HOM05D007271 ORTHO05D009217 2.9e-121 439.9 454 48.5
VMungo0251G3497 Vigna mungo HOM05D007271 ORTHO05D009217 3.8e-121 439.5 465 46.2
ATR0829G091 Amborella trichopoda HOM05D007271 ORTHO05D009217 5.5e-96 355.9 393 47.6
FAN04G0635 Fragaria x ananassa HOM05D007271 ORTHO05D009217 7.9e-95 352.1 397 48.1
SEGI_35026 Sequoiadendron giganteum HOM05D007271 ORTHO05D009217 1.1e-72 278.5 493 35.1
unitig_32.g10968 Utricularia gibba HOM05D007271 ORTHO05D009217 1.4e-72 278.1 402 39.1
Ciclev10003404m.g Citrus clementina HOM05D007271 ORTHO05D009217 3.0e-70 270.4 516 33.1
HanXRQChr06g0172971 Helianthus annuus HOM05D007271 ORTHO05D009217 1.0e-57 228.8 180 60.0
HanXRQChr06g0172981 Helianthus annuus HOM05D007271 ORTHO05D009217 5.0e-57 226.5 192 52.6
TPR.G9088 Trifolium pratense HOM05D007271 ORTHO05D009217 1.9e-40 171.4 180 51.1
TPR.G9092 Trifolium pratense HOM05D007271 ORTHO05D009217 6.4e-28 129.8 100 61.0
Oeu061072.1 Olea europaea HOM05D007271 ORTHO05D009217 3.3e-24 117.5 104 61.5
TPR.G34495 Trifolium pratense HOM05D007271 ORTHO05D009217 1.3e-20 105.5 109 47.7
COL.COLO4_16884 Corchorus olitorius HOM05D007271 ORTHO05D009217 9.2e-19 99.4 116 44.8
TPR.G8637 Trifolium pratense HOM05D007271 ORTHO05D009217 1.7e-17 95.1 72 58.3
Ca_22492_v3 Cicer arietinum L. HOM05D007271 ORTHO05D009217 2.5e-16 91.3 108 41.7
QL12p000442 Quercus lobata HOM05D007271 ORTHO05D009217 7.3e-16 89.7 89 51.7
COL.COLO4_16886 Corchorus olitorius HOM05D007271 ORTHO05D009217 3.7e-12 77.4 85 42.4
PSO675G5865 Papaver somniferum HOM05D007271 ORTHO05D009217 6.4e-12 76.6 108 41.7
arahy.Tifrunner.gnm1.ann1.RGNF9W Arachis hypogaea HOM05D007271 ORTHO05D009217 2.7e-10 71.2 109 39.4
arahy.Tifrunner.gnm1.ann1.WVYD0V Arachis hypogaea HOM05D007271 ORTHO05D009217 2.7e-10 71.2 109 39.4
ATR0829G132 Amborella trichopoda HOM05D007271 ORTHO05D009217 4.0e-06 57.4 100 37.0


User provided reference genes

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