Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000109g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.2e-88 327.8 177 100.0
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.5e-74 280.4 176 86.4
Nitab4.5_0022233g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.0e-73 277.3 176 84.7
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-63 245.7 176 76.7
Nitab4.5_0006852g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-61 240.4 170 77.1
Nitab4.5_0000055g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.2e-61 237.3 173 76.3
Nitab4.5_0005719g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-56 223.0 176 69.9
Nitab4.5_0007540g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-54 216.1 140 85.0
Nitab4.5_0005517g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.9e-54 214.9 169 72.2
Nitab4.5_0001976g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.4e-54 214.5 176 65.3
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.2e-53 212.2 137 82.5
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-52 210.3 176 64.2
Nitab4.5_0004036g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-52 209.5 139 82.7
Nitab4.5_0000391g0380 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-51 206.8 129 86.0
Nitab4.5_0002671g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.6e-51 204.5 129 83.7
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.6e-51 204.1 127 85.0
Nitab4.5_0003674g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-50 203.8 176 63.6
Nitab4.5_0000481g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.3e-50 201.1 169 66.9
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.7e-49 198.4 169 64.5
Nitab4.5_0000423g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-47 193.0 153 69.9
PGSC0003DMG400041945 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.1e-43 178.3 170 57.1
PGSC0003DMG400036263 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.5e-42 176.0 170 56.5
Nitab4.5_0005584g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.1e-41 171.0 129 72.9
Nitab4.5_0002340g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-40 168.3 149 67.8
PGSC0003DMG400038662 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.3e-40 168.3 170 55.9
Nitab4.5_0002766g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.5e-39 166.8 116 78.4
PGSC0003DMG400038068 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.0e-39 166.4 153 60.8
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 4.4e-39 165.2 153 59.5
Nitab4.5_0005857g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-38 162.9 129 70.5
Nitab4.5_0000419g0110 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-37 159.8 149 63.1
Nitab4.5_0006237g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-36 156.4 97 83.5
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 3.5e-36 155.6 169 50.3
Nitab4.5_0003143g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-35 153.3 128 62.5
Peaxi162Scf01543g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 1.7e-35 153.3 169 50.9
Nitab4.5_0000232g0170 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.6e-35 151.4 91 84.6
Peaxi162Scf00337g00075 Petunia axillaris HOM05D003617 ORTHO05D007165 6.6e-35 151.4 169 49.1
Nitab4.5_0008204g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 8.7e-35 151.0 108 80.6
Nitab4.5_0009477g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.9e-34 149.8 145 62.8
Nitab4.5_0006406g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.5e-34 149.4 87 86.2
Nitab4.5_0000416g0200 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.6e-33 146.7 110 75.5
Nitab4.5_0002963g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-33 146.4 87 83.9
Nitab4.5_0000040g0540 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-32 143.7 87 86.2
PGSC0003DMG400036889 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.1e-32 142.5 137 56.9
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.2e-31 140.6 108 65.7
Peaxi162Scf00108g00186 Petunia axillaris HOM05D003617 ORTHO05D007165 1.2e-31 140.6 169 47.3
PGSC0003DMG400038881 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-31 140.2 144 54.9
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-30 137.1 179 43.6
Nitab4.5_0002555g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.7e-30 136.7 175 50.3
Nitab4.5_0000045g0130 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.2e-30 136.3 80 86.2
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 2.2e-30 136.3 179 43.0
PGSC0003DMG400044095 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.2e-30 136.3 170 47.1
PGSC0003DMG400043042 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.9e-30 136.0 144 54.9
Nitab4.5_0007928g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-29 133.7 99 76.8
Peaxi162Scf00104g00615 Petunia axillaris HOM05D003617 ORTHO05D007165 1.9e-29 133.3 166 45.8
Nitab4.5_0001081g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.1e-29 131.3 129 61.2
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.3e-29 131.0 76 85.5
Nitab4.5_0013986g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.3e-29 131.0 128 58.6
Peaxi162Scf00658g00027 Petunia axillaris HOM05D003617 ORTHO05D007165 1.6e-28 130.2 166 44.6
PGSC0003DMG400030192 Solanum tuberosum HOM05D003617 ORTHO05D007165 5.6e-26 121.7 136 52.9
Sopen10g011340 Solanum pennellii HOM05D003617 ORTHO05D007165 2.1e-25 119.8 170 42.9
Nitab4.5_0000040g0570 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-25 119.0 80 82.5
Nitab4.5_0007804g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.7e-25 119.0 72 84.7
Nitab4.5_0004315g0030 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.3e-24 115.2 68 85.3
Nitab4.5_0005492g0140 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.9e-24 114.8 63 90.5
CAN.G755.17 Capsicum annuum HOM05D003617 ORTHO05D007165 3.8e-22 109.0 170 36.5
Sopen00g013880 Solanum pennellii HOM05D003617 ORTHO05D007165 8.4e-22 107.8 102 56.9
Peaxi162Scf00321g00053 Petunia axillaris HOM05D003617 ORTHO05D007165 1.9e-21 106.7 131 44.3
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.5e-21 106.3 169 36.7
Sopen10g017250 Solanum pennellii HOM05D000004 ORTHO05D007165 4.6e-20 102.1 107 54.2
PGSC0003DMG400008666 Solanum tuberosum HOM05D003617 ORTHO05D007165 7.9e-20 101.3 103 55.3
Nitab4.5_0001101g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-19 100.1 55 89.1
PGSC0003DMG400047101 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.8e-19 100.1 142 40.1
PGSC0003DMG400036903 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.5e-18 96.3 149 38.3
Nitab4.5_0002701g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.3e-17 94.0 79 58.2
Sopen12g027070 Solanum pennellii HOM05D003617 ORTHO05D007165 3.7e-17 92.4 116 49.1
PGSC0003DMG400040197 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.8e-17 92.0 170 34.7
Sopen10g018400 Solanum pennellii HOM05D003617 ORTHO05D007165 1.1e-16 90.9 96 56.2
Nitab4.5_0000095g0100 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-16 90.1 154 39.0
Nitab4.5_0002289g0150 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-16 90.1 62 75.8
Peaxi162Scf00963g00001 Petunia axillaris HOM05D003617 ORTHO05D007165 2.4e-16 89.7 83 55.4
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 2.4e-16 89.7 166 36.1
PGSC0003DMG400046986 Solanum tuberosum HOM05D003617 ORTHO05D007165 4.5e-15 85.5 154 35.7
Peaxi162Scf00588g00014 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-14 84.0 73 56.2
Solyc01g066890.2 Solanum lycopersicum HOM05D003617 ORTHO05D007165 1.3e-14 84.0 179 31.8
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 1.3e-14 84.0 170 32.4
Nitab4.5_0000415g0070 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.8e-14 82.4 66 62.1
Peaxi162Scf00445g00084 Petunia axillaris HOM05D003617 ORTHO05D007165 3.8e-14 82.4 106 48.1
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.1e-13 80.9 50 86.0
Nitab4.5_0003624g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-12 76.6 78 56.4
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.0e-11 74.3 78 48.7
Nitab4.5_0007944g0030 Nicotiana tabacum HOM05D003617 ORTHO05D286428 2.3e-11 73.2 80 55.0
PGSC0003DMG400045313 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.9e-11 72.4 61 60.7
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.1e-11 72.0 40 82.5
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.9e-10 70.1 92 41.3
PGSC0003DMG400035401 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.8e-09 66.2 123 33.3
Nitab4.5_0000623g0120 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-09 65.5 53 64.2
Nitab4.5_0003882g0070 Nicotiana tabacum HOM05D003617 ORTHO05D283460 4.8e-09 65.5 74 56.8
CAN.G810.1 Capsicum annuum HOM05D003617 ORTHO05D007165 1.4e-08 63.9 109 36.7
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 2.4e-08 63.2 185 28.1
Solyc07g041360.1 Solanum lycopersicum HOM05D003617 ORTHO05D007165 9.0e-08 61.2 77 41.6
Nitab4.5_0000573g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-07 60.1 40 77.5
PGSC0003DMG400034694 Solanum tuberosum HOM05D003617 ORTHO05D007165 3.4e-07 59.3 114 34.2
Sopen12g019440 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-07 58.9 46 60.9
CAN.G495.5 Capsicum annuum HOM05D003617 ORTHO05D007165 5.0e-06 55.5 87 36.8
Sopen07g020760 Solanum pennellii HOM05D000002 ORTHO05D000001 5.0e-06 55.5 115 32.2


User provided reference genes

Program Settings