Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.7e-61 239.6 162 100.0
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.1e-59 232.6 162 98.1
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 3.6e-43 178.7 163 80.4
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 3.9e-42 175.3 163 77.3
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 3.3e-41 172.2 163 79.1
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 1.1e-39 167.2 163 79.8
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 1.4e-36 156.8 164 72.6
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 3.3e-33 145.6 162 69.1
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 6.3e-32 141.4 132 81.1
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 3.1e-31 139.0 150 74.0
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 1.6e-27 126.7 133 72.2
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 1.6e-27 126.7 168 67.3
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 5.2e-26 121.7 137 72.3
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.8e-26 120.9 169 58.6
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 1.1e-25 120.6 125 72.0
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.1e-25 120.6 139 71.9
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 2.0e-25 119.8 163 63.8
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 4.4e-25 118.6 145 69.7
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 7.5e-25 117.9 168 62.5
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.3e-24 117.1 169 59.2
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 4.8e-24 115.2 164 63.4
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 8.2e-24 114.4 149 60.4
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 1.1e-23 114.0 138 68.1
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.1e-23 114.0 129 72.1
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.4e-23 113.6 162 61.7
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 4.1e-23 112.1 171 60.8
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 7.0e-23 111.3 162 64.2
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 9.1e-23 110.9 169 60.4
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.2e-22 110.5 128 69.5
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 1.6e-22 110.2 135 68.9
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 2.7e-22 109.4 128 71.1
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 2.7e-22 109.4 128 71.1
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 2.7e-22 109.4 132 73.5
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 4.5e-22 108.6 149 64.4
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 4.5e-22 108.6 149 64.4
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 2.9e-21 105.9 170 60.6
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.8e-21 105.5 160 58.1
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 6.5e-21 104.8 169 57.4
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 8.5e-21 104.4 167 60.5
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.1e-20 104.0 146 64.4
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 1.5e-20 103.6 125 72.8
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 1.9e-20 103.2 138 63.0
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 2.5e-20 102.8 128 67.2
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 4.2e-20 102.1 109 82.6
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 5.5e-20 101.7 135 65.9
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 5.5e-20 101.7 130 66.9
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 7.2e-20 101.3 155 61.9
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 2.1e-19 99.8 157 63.1
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 2.1e-19 99.8 163 60.7
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 3.6e-19 99.0 138 67.4
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 4.7e-19 98.6 151 60.3
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.7e-19 98.6 137 64.2
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 4.7e-19 98.6 135 66.7
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 4.7e-19 98.6 131 67.2
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 4.7e-19 98.6 166 50.6
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 6.1e-19 98.2 127 69.3
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 8.0e-19 97.8 137 63.5
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 8.0e-19 97.8 137 63.5
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.0e-19 97.8 138 66.7
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 8.0e-19 97.8 138 66.7
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 1.0e-18 97.4 138 66.7
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 1.4e-18 97.1 151 62.3
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 1.8e-18 96.7 137 62.8
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 5.2e-18 95.1 127 66.9
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 5.2e-18 95.1 156 61.5
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 5.2e-18 95.1 156 61.5
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 5.2e-18 95.1 156 61.5
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 5.2e-18 95.1 160 61.9
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 6.8e-18 94.7 156 60.3
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 6.8e-18 94.7 156 60.9
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 6.8e-18 94.7 215 48.4
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 8.8e-18 94.4 167 56.3
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 8.8e-18 94.4 127 66.1
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 8.8e-18 94.4 127 66.1
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 8.8e-18 94.4 141 62.4
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 8.8e-18 94.4 164 57.3
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 8.8e-18 94.4 145 59.3
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 1.2e-17 94.0 149 61.7
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.5e-17 93.6 132 66.7
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 2.0e-17 93.2 140 62.1
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 3.4e-17 92.4 138 64.5
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 4.4e-17 92.0 153 61.4
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 7.5e-17 91.3 147 52.4
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 9.8e-17 90.9 158 54.4
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 1.7e-16 90.1 167 57.5
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 3.7e-16 89.0 164 54.9
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 4.8e-16 88.6 137 64.2
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 4.8e-16 88.6 126 66.7
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 1.1e-15 87.4 175 55.4
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 7.0e-15 84.7 156 48.1
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.6e-14 83.6 103 72.8
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 3.5e-14 82.4 124 46.8
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 5.5e-12 75.1 127 60.6
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 9.5e-12 74.3 166 53.6
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 9.5e-12 74.3 130 56.9
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 2.7e-11 72.8 119 62.2
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 3.6e-11 72.4 153 44.4
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 8.0e-11 71.2 132 53.8
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 4.0e-10 68.9 144 56.9
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 2.2e-08 63.2 135 49.6
SEGI_26721 Sequoiadendron giganteum HOM05D020219 ORTHO05D023531 2.7e-06 56.2 130 53.1


User provided reference genes

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