Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000107g0140 Nicotiana tabacum HOM05D003026 ORTHO05D009767 2.7e-132 475.3 237 100.0
Nitab4.5_0006946g0020 Nicotiana tabacum HOM05D003026 ORTHO05D009767 1.2e-87 327.0 228 77.2
QL09p004047 Quercus lobata HOM05D003026 ORTHO05D009767 9.8e-42 174.5 243 49.4
Dinv41797 Davidia involucrata HOM05D003026 ORTHO05D009767 2.9e-41 172.9 198 52.5
Oeu017733.1 Olea europaea HOM05D003026 ORTHO05D009767 4.1e-40 169.1 259 44.8
MSTRG.1583 Avicennia marina HOM05D003026 ORTHO05D009767 1.6e-39 167.2 219 47.9
Actinidia23023 Actinidia chinensis HOM05D003026 ORTHO05D009767 1.0e-38 164.5 237 43.9
Rhsim12G0004100 Rhododendron simsii HOM05D003026 ORTHO05D009767 1.0e-38 164.5 257 44.7
GSVIVG01036436001 Vitis vinifera HOM05D003026 ORTHO05D009767 2.3e-38 163.3 248 44.4
TAR381G0043 Trochodendron aralioides HOM05D003026 ORTHO05D009767 5.0e-38 162.2 204 49.5
Prupe.1G546800 Prunus persica HOM05D003026 ORTHO05D009767 1.9e-37 160.2 201 46.3
THA.LOC104813086 Tarenaya hassleriana HOM05D003026 ORTHO05D009767 4.3e-37 159.1 189 50.8
vmacro00926 Vaccinium macrocarpon HOM05D003026 ORTHO05D009767 4.3e-37 159.1 212 46.2
Sp6g07360 Schrenkiella parvula HOM05D003026 ORTHO05D009767 1.6e-36 157.1 183 49.2
Cfa008110 Carpinus fangiana HOM05D003026 ORTHO05D009767 2.1e-36 156.8 251 45.0
MD15G1399300 Malus domestica HOM05D003026 ORTHO05D009767 2.1e-36 156.8 193 47.2
SGA_v2.0_scaffold118G32585 Striga asiatica HOM05D000199 ORTHO05D009767 2.1e-36 156.8 194 49.5
FvH4_5g33030 Fragaria vesca HOM05D003026 ORTHO05D009767 3.6e-36 156.0 217 43.8
RcHm_v2.0_Chr7g0231111 Rosa chinensis HOM05D003026 ORTHO05D009767 3.6e-36 156.0 158 51.9
CARHR260860 Cardamine hirsuta HOM05D003026 ORTHO05D009767 6.2e-36 155.2 183 47.5
Manes.18G121500 Manihot esculenta HOM05D003026 ORTHO05D009767 6.2e-36 155.2 248 44.8
Carub.0006s2855 Capsella rubella HOM05D003026 ORTHO05D009767 8.0e-36 154.8 170 50.0
Migut.N00216 Erythranthe guttata HOM05D003026 ORTHO05D009767 8.0e-36 154.8 183 49.7
Ciclev10021013m.g Citrus clementina HOM05D003026 ORTHO05D009767 1.1e-35 154.5 223 46.2
CANSAT25G2125 Cannabis sativa HOM05D003026 ORTHO05D009767 1.8e-35 153.7 241 44.0
FAN08G2043 Fragaria x ananassa HOM05D003026 ORTHO05D009767 1.8e-35 153.7 201 45.3
FAN18G3951 Fragaria x ananassa HOM05D003026 ORTHO05D009767 2.3e-35 153.3 193 46.1
AT4G10000 Arabidopsis thaliana HOM05D003026 ORTHO05D009767 3.1e-35 152.9 153 52.9
Cc10_g09190 Coffea canephora HOM05D003026 ORTHO05D009767 3.1e-35 152.9 180 50.6
Thecc.08G173000 Theobroma cacao HOM05D003026 ORTHO05D009767 6.8e-35 151.8 249 43.4
AL6G43720 Arabidopsis lyrata HOM05D003026 ORTHO05D009767 1.2e-34 151.0 236 41.9
CiPaw.04G011100 Carya illinoinensis HOM05D003026 ORTHO05D009767 1.2e-34 151.0 184 49.5
Atru.chr13.2419 Acer truncatum HOM05D003026 ORTHO05D009767 2.0e-34 150.2 159 52.8
Haze_13928 Corylus avellana HOM05D003026 ORTHO05D009767 3.4e-34 149.4 196 48.5
BcaB05g23929 Brassica carinata HOM05D003026 ORTHO05D009767 4.4e-34 149.1 154 51.3
Gohir.A05G252400 Gossypium hirsutum HOM05D003026 ORTHO05D009767 4.4e-34 149.1 232 43.5
Gohir.D05G254200 Gossypium hirsutum HOM05D003026 ORTHO05D009767 1.3e-33 147.5 232 44.4
Gorai.009G265800 Gossypium raimondii HOM05D003026 ORTHO05D009767 1.3e-33 147.5 232 44.4
unitig_37.g13087 Utricularia gibba HOM05D003026 ORTHO05D009767 1.3e-33 147.5 203 47.3
Potri.013G102000 Populus trichocarpa HOM05D003026 ORTHO05D009767 1.7e-33 147.1 238 39.5
PGR042G1111 Punica granatum HOM05D003026 ORTHO05D009767 2.2e-33 146.7 199 45.2
Thhalv10028854m.g Eutrema salsugineum HOM05D003026 ORTHO05D009767 2.9e-33 146.4 183 46.4
BraA02t07690Z Brassica rapa HOM05D003026 ORTHO05D009767 6.4e-33 145.2 198 47.0
CsaV3_2G033100 Cucumis sativus L. HOM05D003026 ORTHO05D009767 1.1e-32 144.4 245 38.4
ClCG11G008840 Citrullus lanatus HOM05D003026 ORTHO05D009767 1.9e-32 143.7 253 40.3
Nn1g02996 Nelumbo nucifera HOM05D003026 ORTHO05D009767 3.2e-32 142.9 187 44.9
TWI23G0002 Tripterygium wilfordii HOM05D003026 ORTHO05D009767 2.1e-31 140.2 230 43.0
A02p26820 Brassica napus HOM05D003026 ORTHO05D009767 2.7e-31 139.8 198 45.5
Aqoxy5G02608 Aquilegia oxysepala HOM05D003026 ORTHO05D009767 4.6e-31 139.0 176 47.7
Eucgr.F02962 Eucalyptus grandis HOM05D003026 ORTHO05D009767 7.8e-31 138.3 250 40.8
ATR1089G091 Amborella trichopoda HOM05D003026 ORTHO05D009767 1.0e-30 137.9 244 39.3
arahy.Tifrunner.gnm1.ann1.21P17U Arachis hypogaea HOM05D003026 ORTHO05D009767 1.0e-30 137.9 166 46.4
arahy.Tifrunner.gnm1.ann1.4X8KJH Arachis hypogaea HOM05D003026 ORTHO05D009767 1.0e-30 137.9 166 46.4
MELO3C008080.2 Cucumis melo HOM05D003026 ORTHO05D009767 1.0e-30 137.9 251 40.6
Lalb_Chr05g0228571 Lupinus albus HOM05D003026 ORTHO05D009767 1.7e-30 137.1 155 47.7
CDE07G0492 Ceratophyllum demersum HOM05D003026 ORTHO05D009767 2.3e-30 136.7 182 46.2
TPR.G25502 Trifolium pratense HOM05D003026 ORTHO05D009767 3.0e-30 136.3 159 46.5
BcaC03g16437 Brassica carinata HOM05D003026 ORTHO05D009767 6.6e-30 135.2 191 44.5
Aa31LG9G12000 Aethionema arabicum HOM05D003026 ORTHO05D009767 9.5e-29 131.3 221 38.9
Psat1g000120 Pisum sativum HOM05D003026 ORTHO05D009767 9.5e-29 131.3 164 44.5
Ca_13979_v3 Cicer arietinum L. HOM05D003026 ORTHO05D009767 2.8e-28 129.8 164 45.1
Lj9A701G49 Lonicera japonica HOM05D003026 ORTHO05D009767 3.6e-28 129.4 253 39.5
Lj3g0012239 Lotus japonicus HOM05D003026 ORTHO05D009767 1.4e-27 127.5 224 38.4
CARHR260600 Cardamine hirsuta HOM05D003026 ORTHO05D009767 3.1e-27 126.3 141 48.2
Medtr3g005720 Medicago truncatula HOM05D003026 ORTHO05D009767 3.1e-27 126.3 211 37.4
COL.COLO4_24611 Corchorus olitorius HOM05D003026 ORTHO05D009767 8.9e-27 124.8 140 47.1
Duzib268G0879 Durio zibethinus HOM05D003026 ORTHO05D009767 1.3e-25 120.9 201 42.3
Phvul.005G001500 Phaseolus vulgaris HOM05D003026 ORTHO05D009767 1.7e-25 120.6 160 45.0
Glyma.04G255900 Glycine max HOM05D003026 ORTHO05D009767 2.2e-25 120.2 159 42.8
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 2.2e-25 120.2 161 44.1
Mapoly0035s0064 Marchantia polymorpha HOM05D003026 ORTHO05D009767 3.7e-25 119.4 152 41.4
VMungo1080G1151 Vigna mungo HOM05D003026 ORTHO05D009767 4.9e-25 119.0 161 44.1
AagrBONN_evm.TU.Sc2ySwM_117.2055 Anthoceros agrestis HOM05D003026 ORTHO05D009767 1.4e-24 117.5 181 38.1
Pp3c8_16120 Physcomitrium patens HOM05D003026 ORTHO05D009767 1.4e-24 117.5 185 38.9
C02p42610 Brassica napus HOM05D003026 ORTHO05D009767 7.1e-24 115.2 139 47.5
CSS0044209 Camellia sinensis var. sinensis HOM05D003026 ORTHO05D009767 1.6e-23 114.0 164 48.2
Peaxi162Scf00688g00013 Petunia axillaris HOM05D003026 ORTHO05D009767 1.2e-20 104.4 58 82.8
Sabra13G0088200 Salix brachista HOM05D003026 ORTHO05D009767 5.8e-18 95.5 207 33.8
MCO07G018 Micromonas commoda HOM05D003026 ORTHO05D009767 4.6e-15 85.9 164 34.1
BolC2t10306H Brassica oleracea HOM05D003026 ORTHO05D009767 1.7e-14 84.0 94 46.8
PRCOL_00000523 Prasinoderma coloniale HOM05D003026 ORTHO05D009767 1.1e-13 81.3 147 36.1
SEGI_05033 Sequoiadendron giganteum HOM05D003026 ORTHO05D009767 4.3e-13 79.3 41 85.4
Zm00001eb082070 Zea mays HOM05D003026 ORTHO05D009767 2.6e-10 70.1 41 75.6
SMO119G0330 Selaginella moellendorffii HOM05D003026 ORTHO05D009767 9.9e-10 68.2 53 56.6
SMO119G0431 Selaginella moellendorffii HOM05D003026 ORTHO05D009767 1.7e-09 67.4 41 68.3
SMO115G0175 Selaginella moellendorffii HOM05D003026 ORTHO05D009767 6.4e-09 65.5 41 65.9
SMO115G0344 Selaginella moellendorffii HOM05D003026 ORTHO05D009767 6.4e-09 65.5 41 65.9
SMO115G0249 Selaginella moellendorffii HOM05D003026 ORTHO05D009767 8.4e-09 65.1 41 65.9
PGSC0003DMG400010732 Solanum tuberosum HOM05D003026 ORTHO05D009767 4.2e-08 62.8 109 50.5
SMO119G0500 Selaginella moellendorffii HOM05D003026 ORTHO05D009767 1.2e-07 61.2 41 61.0
Oeu017681.1 Olea europaea HOM05D003026 ORTHO05D007420 2.7e-07 60.1 54 53.7
Potri.006G213000 Populus trichocarpa HOM05D003026 ORTHO05D007420 3.5e-07 59.7 54 53.7
Sabra06G0164000 Salix brachista HOM05D003026 ORTHO05D007420 3.5e-07 59.7 54 53.7
ClCG10G018940 Citrullus lanatus HOM05D003026 ORTHO05D007420 4.6e-07 59.3 54 53.7
CsaV3_3G037310 Cucumis sativus L. HOM05D003026 ORTHO05D007420 4.6e-07 59.3 54 53.7
Sed0018407 Sechium edule HOM05D003026 ORTHO05D007420 6.0e-07 58.9 54 53.7
ECA248G1469 Erigeron canadensis HOM05D003026 ORTHO05D007420 7.9e-07 58.5 54 53.7
Sc07g0005610 Simmondsia chinensis HOM05D003026 ORTHO05D007420 1.0e-06 58.2 54 50.0
AUR62006187 Chenopodium quinoa HOM05D003026 ORTHO05D007420 1.3e-06 57.8 54 51.9
AUR62028521 Chenopodium quinoa HOM05D003026 ORTHO05D007420 1.3e-06 57.8 54 51.9
HanXRQChr01g0010391 Helianthus annuus HOM05D003026 ORTHO05D007420 1.7e-06 57.4 54 51.9
Lsat_1_v5_gn_5_164920 Lactuca sativa HOM05D003026 ORTHO05D007420 2.3e-06 57.0 54 51.9
HPP92_000007 Vanilla planifolia HOM05D003026 ORTHO05D007420 2.3e-06 57.0 54 51.9
Ah.08g210550 Amaranthus hybridus HOM05D003026 ORTHO05D007420 3.0e-06 56.6 54 50.0
MSTRG.5846 Avicennia marina HOM05D003026 ORTHO05D007420 3.0e-06 56.6 54 51.9
CSS0023185 Camellia sinensis var. sinensis HOM05D003026 ORTHO05D007420 3.9e-06 56.2 58 48.3
Manes.08G025800 Manihot esculenta HOM05D003026 ORTHO05D007420 3.9e-06 56.2 54 50.0
CANSAT64G0205 Cannabis sativa HOM05D003026 ORTHO05D007420 5.1e-06 55.8 35 62.9
CDE08G0919 Ceratophyllum demersum HOM05D003026 ORTHO05D007420 5.1e-06 55.8 54 50.0
FAN05G4542 Fragaria x ananassa HOM05D003026 ORTHO05D007420 5.1e-06 55.8 41 63.4
Gohir.A01G206100 Gossypium hirsutum HOM05D003026 ORTHO05D007420 5.1e-06 55.8 54 50.0
Gohir.D01G195500 Gossypium hirsutum HOM05D003026 ORTHO05D007420 5.1e-06 55.8 54 50.0
Gorai.002G239700 Gossypium raimondii HOM05D003026 ORTHO05D007420 5.1e-06 55.8 54 50.0
SGA_v2.0_scaffold31G12914 Striga asiatica HOM05D003026 ORTHO05D007420 5.1e-06 55.8 41 61.0
vmacro07410 Vaccinium macrocarpon HOM05D003026 ORTHO05D007420 5.1e-06 55.8 54 50.0
Eucgr.K02032 Eucalyptus grandis HOM05D003026 ORTHO05D007420 6.6e-06 55.5 54 50.0
Rhsim03G0074800 Rhododendron simsii HOM05D003026 ORTHO05D007420 6.6e-06 55.5 54 50.0
SalBow3G1828 Salvia bowleyana HOM05D003026 ORTHO05D007420 6.6e-06 55.5 54 50.0
GSVIVG01033851001 Vitis vinifera HOM05D003026 ORTHO05D007420 6.6e-06 55.5 54 50.0
EL10Ac7g16913 Beta vulgaris HOM05D003026 ORTHO05D007420 8.7e-06 55.1 41 58.5
FvH4_6g18820 Fragaria vesca HOM05D003026 ORTHO05D007420 8.7e-06 55.1 41 61.0
FAN02G1538 Fragaria x ananassa HOM05D003026 ORTHO05D007420 8.7e-06 55.1 41 61.0
FAN14G2975 Fragaria x ananassa HOM05D003026 ORTHO05D007420 8.7e-06 55.1 41 61.0
Lj2A138T45 Lonicera japonica HOM05D003026 ORTHO05D007420 8.7e-06 55.1 54 50.0
Nn2g14167 Nelumbo nucifera HOM05D003026 ORTHO05D007420 8.7e-06 55.1 44 56.8
Prupe.7G109400 Prunus persica HOM05D003026 ORTHO05D007420 8.7e-06 55.1 41 61.0
RcHm_v2.0_Chr3g0473831 Rosa chinensis HOM05D003026 ORTHO05D007420 8.7e-06 55.1 41 61.0


User provided reference genes

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