Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000106g0280 Nicotiana tabacum HOM05D003714 ORTHO05D004379 8.6e-108 393.7 197 100.0
Nitab4.5_0010325g0010 Nicotiana tabacum HOM05D003714 ORTHO05D004379 1.0e-84 317.0 218 77.5
Peaxi162Scf00029g01511 Petunia axillaris HOM05D003714 ORTHO05D004379 2.0e-80 302.8 218 71.6
CAN.G1966.3 Capsicum annuum HOM05D003714 ORTHO05D004379 2.4e-78 295.8 205 75.1
Solyc06g075100.3 Solanum lycopersicum HOM05D003714 ORTHO05D004379 2.3e-76 289.3 217 70.0
Nitab4.5_0001939g0040 Nicotiana tabacum HOM05D003714 ORTHO05D004379 9.6e-75 283.9 214 68.7
Potri.009G010900 Populus trichocarpa HOM05D003714 ORTHO05D004379 1.2e-74 283.5 215 68.4
Sopen11g028270 Solanum pennellii HOM05D003714 ORTHO05D004379 1.2e-74 283.5 210 69.5
Solyc11g069560.2 Solanum lycopersicum HOM05D003714 ORTHO05D004379 1.1e-73 280.4 210 68.6
Ciclev10030090m.g Citrus clementina HOM05D003714 ORTHO05D004379 3.1e-73 278.9 216 64.4
Peaxi162Scf00270g00113 Petunia axillaris HOM05D003714 ORTHO05D004379 5.2e-73 278.1 223 66.8
RcHm_v2.0_Chr5g0058661 Rosa chinensis HOM05D003714 ORTHO05D004379 5.2e-73 278.1 217 65.9
Sopen06g031520 Solanum pennellii HOM05D003714 ORTHO05D004379 8.9e-73 277.3 209 69.9
MD11G1138800 Malus domestica HOM05D003714 ORTHO05D004379 1.5e-72 276.6 215 63.7
Prupe.6G103800 Prunus persica HOM05D003714 ORTHO05D004379 2.6e-72 275.8 215 66.0
FvH4_3g31890 Fragaria vesca HOM05D003714 ORTHO05D004379 3.4e-72 275.4 216 66.2
FAN11G3344 Fragaria x ananassa HOM05D003714 ORTHO05D004379 3.4e-72 275.4 216 66.2
MD03G1120400 Malus domestica HOM05D003714 ORTHO05D004379 4.4e-72 275.0 214 64.0
QL01p021761 Quercus lobata HOM05D003714 ORTHO05D004379 4.4e-72 275.0 216 65.7
FAN25G0709 Fragaria x ananassa HOM05D003714 ORTHO05D004379 7.6e-72 274.2 216 65.7
Sabra09G0006800 Salix brachista HOM05D003714 ORTHO05D004379 7.6e-72 274.2 215 66.5
GSVIVG01025204001 Vitis vinifera HOM05D003714 ORTHO05D004379 7.6e-72 274.2 215 64.2
FAN21G0199 Fragaria x ananassa HOM05D003714 ORTHO05D004379 9.9e-72 273.9 216 65.7
Nitab4.5_0000602g0070 Nicotiana tabacum HOM05D003714 ORTHO05D004379 1.7e-71 273.1 197 71.6
CiPaw.13G115700 Carya illinoinensis HOM05D003714 ORTHO05D004379 2.2e-71 272.7 215 64.2
FAN16G2552 Fragaria x ananassa HOM05D003714 ORTHO05D004379 2.2e-71 272.7 216 65.3
PGSC0003DMG400008087 Solanum tuberosum HOM05D003714 ORTHO05D004379 3.8e-71 271.9 210 68.1
TWI79G0067 Tripterygium wilfordii HOM05D003714 ORTHO05D004379 3.8e-71 271.9 215 66.0
Manes.11G147100 Manihot esculenta HOM05D003714 ORTHO05D004379 6.4e-71 271.2 216 64.8
MSTRG.18670 Avicennia marina HOM05D003714 ORTHO05D004379 1.1e-70 270.4 218 66.1
CSS0039471 Camellia sinensis var. sinensis HOM05D003714 ORTHO05D004379 2.4e-70 269.2 218 63.8
CSS0046644 Camellia sinensis var. sinensis HOM05D003714 ORTHO05D004379 2.4e-70 269.2 218 63.8
Haze_23797 Corylus avellana HOM05D003714 ORTHO05D004379 4.2e-70 268.5 209 66.0
Haze_23798 Corylus avellana HOM05D003714 ORTHO05D004379 4.2e-70 268.5 209 66.0
Sc15g0001490 Simmondsia chinensis HOM05D003714 ORTHO05D004379 4.2e-70 268.5 217 65.0
TAR633G1536 Trochodendron aralioides HOM05D003714 ORTHO05D004379 4.2e-70 268.5 215 64.2
Manes.04G019400 Manihot esculenta HOM05D003714 ORTHO05D004379 7.1e-70 267.7 215 64.2
Oeu001285.1 Olea europaea HOM05D003714 ORTHO05D004379 7.1e-70 267.7 207 66.7
Thecc.09G342900 Theobroma cacao HOM05D003714 ORTHO05D004379 7.1e-70 267.7 215 63.7
Cc01_g10960 Coffea canephora HOM05D003714 ORTHO05D004379 1.2e-69 266.9 223 65.0
Gohir.A03G032400 Gossypium hirsutum HOM05D003714 ORTHO05D004379 1.2e-69 266.9 213 62.9
Lj2C1024T6 Lonicera japonica HOM05D003714 ORTHO05D004379 1.6e-69 266.5 218 65.6
Gorai.004G230400 Gossypium raimondii HOM05D003714 ORTHO05D004379 2.7e-69 265.8 216 63.4
Nn2g10822 Nelumbo nucifera HOM05D003714 ORTHO05D004379 2.7e-69 265.8 215 63.3
MBI10_g19605_MAGBIO Magnolia biondii HOM05D003714 ORTHO05D004379 3.5e-69 265.4 212 63.7
Lalb_Chr01g0004371 Lupinus albus HOM05D003714 ORTHO05D004379 4.6e-69 265.0 228 62.3
Gohir.A08G199100 Gossypium hirsutum HOM05D003714 ORTHO05D004379 6.0e-69 264.6 216 63.4
Hma1.2p1_0307F.1_g119810 Hydrangea macrophylla HOM05D003714 ORTHO05D004379 6.0e-69 264.6 220 62.7
TWI75G0420 Tripterygium wilfordii HOM05D003714 ORTHO05D004379 7.8e-69 264.2 215 63.7
Gohir.D08G216500 Gossypium hirsutum HOM05D003714 ORTHO05D004379 1.3e-68 263.5 216 63.0
Gohir.D03G136000 Gossypium hirsutum HOM05D003714 ORTHO05D004379 1.7e-68 263.1 213 62.9
Gorai.003G143100 Gossypium raimondii HOM05D003714 ORTHO05D004379 1.7e-68 263.1 213 62.9
EL10Ac9g22541 Beta vulgaris HOM05D003714 ORTHO05D004379 5.1e-68 261.5 217 61.8
CsaV3_1G013950 Cucumis sativus L. HOM05D003714 ORTHO05D004379 5.1e-68 261.5 217 61.8
Eucgr.B02513 Eucalyptus grandis HOM05D003714 ORTHO05D004379 5.1e-68 261.5 219 62.1
DCAR_022764 Daucus carota HOM05D003714 ORTHO05D004379 6.6e-68 261.2 215 62.3
Duzib168G1405 Durio zibethinus HOM05D003714 ORTHO05D004379 6.6e-68 261.2 215 62.3
Potri.004G212000 Populus trichocarpa HOM05D003714 ORTHO05D004379 6.6e-68 261.2 208 65.4
Sed0011730 Sechium edule HOM05D003714 ORTHO05D004379 6.6e-68 261.2 216 60.6
Glyma.11G145200 Glycine max HOM05D003714 ORTHO05D004379 1.5e-67 260.0 218 61.9
SGA_v2.0_scaffold180G39648 Striga asiatica HOM05D003714 ORTHO05D004379 1.5e-67 260.0 206 65.5
Sabra04G0143400 Salix brachista HOM05D003714 ORTHO05D004379 1.9e-67 259.6 208 64.4
SalBow3G2648 Salvia bowleyana HOM05D003714 ORTHO05D004379 1.9e-67 259.6 215 64.2
AUR62022789 Chenopodium quinoa HOM05D003714 ORTHO05D004379 2.5e-67 259.2 218 61.5
Lalb_Chr03g0027461 Lupinus albus HOM05D003714 ORTHO05D004379 3.3e-67 258.8 217 64.1
Ah.01g003010 Amaranthus hybridus HOM05D003714 ORTHO05D004379 5.6e-67 258.1 206 64.6
CAN.G631.39 Capsicum annuum HOM05D003714 ORTHO05D004379 5.6e-67 258.1 214 64.5
Duzib150G0819 Durio zibethinus HOM05D003714 ORTHO05D004379 5.6e-67 258.1 217 60.4
Hund08163 Selenicereus undatus HOM05D003714 ORTHO05D004379 5.6e-67 258.1 212 62.3
Glyma.12G076600 Glycine max HOM05D003714 ORTHO05D004379 7.3e-67 257.7 217 61.3
Aqoxy1G01219 Aquilegia oxysepala HOM05D003714 ORTHO05D004379 9.6e-67 257.3 215 62.3
MELO3C004898.2 Cucumis melo HOM05D003714 ORTHO05D004379 1.3e-66 256.9 217 61.3
Gohir.D05G104100 Gossypium hirsutum HOM05D003714 ORTHO05D004379 1.3e-66 256.9 216 60.6
Gorai.009G108300 Gossypium raimondii HOM05D003714 ORTHO05D004379 1.3e-66 256.9 216 60.6
AUR62042199 Chenopodium quinoa HOM05D003714 ORTHO05D004379 2.1e-66 256.1 214 61.7
Lj1A202T36 Lonicera japonica HOM05D003714 ORTHO05D004379 2.1e-66 256.1 212 64.2
VMungo1127G1929 Vigna mungo HOM05D003714 ORTHO05D004379 2.8e-66 255.8 216 61.1
Phvul.011G080500 Phaseolus vulgaris HOM05D003714 ORTHO05D004379 3.6e-66 255.4 212 61.8
ClCG01G013560 Citrullus lanatus HOM05D003714 ORTHO05D004379 1.4e-65 253.4 217 60.8
COL.COLO4_18316 Corchorus olitorius HOM05D003714 ORTHO05D004379 1.8e-65 253.1 208 62.0
Gohir.A05G104300 Gossypium hirsutum HOM05D003714 ORTHO05D004379 3.1e-65 252.3 216 59.3
vmacro03207 Vaccinium macrocarpon HOM05D003714 ORTHO05D004379 4.0e-65 251.9 221 60.2
HanXRQChr14g0452661 Helianthus annuus HOM05D003714 ORTHO05D004379 1.2e-64 250.4 219 62.1
Lsat_1_v5_gn_2_100500 Lactuca sativa HOM05D003714 ORTHO05D004379 1.2e-64 250.4 219 63.0
Rhsim13G0095500 Rhododendron simsii HOM05D003714 ORTHO05D004379 1.2e-64 250.4 220 59.1
ECA238G0686 Erigeron canadensis HOM05D003714 ORTHO05D004379 7.6e-64 247.7 222 60.4
Lj3g0001899 Lotus japonicus HOM05D003714 ORTHO05D004379 4.9e-63 245.0 206 62.1
PGR102G2693 Punica granatum HOM05D003714 ORTHO05D004379 8.4e-63 244.2 226 59.3
DCAR_018798 Daucus carota HOM05D003714 ORTHO05D004379 1.1e-62 243.8 197 63.5
Medtr4g058760 Medicago truncatula HOM05D003714 ORTHO05D004379 1.9e-62 243.0 223 58.7
Nn2g13122 Nelumbo nucifera HOM05D003714 ORTHO05D004379 1.9e-62 243.0 215 61.4
Actinidia24111 Actinidia chinensis HOM05D003714 ORTHO05D004379 3.2e-62 242.3 208 59.1
Atru.chr3.3608 Acer truncatum HOM05D003714 ORTHO05D004379 5.4e-62 241.5 206 59.7
Migut.D02239 Erythranthe guttata HOM05D003714 ORTHO05D004379 1.2e-61 240.4 215 61.9
Psat7g144800 Pisum sativum HOM05D003714 ORTHO05D004379 2.3e-60 236.1 218 61.5
CDE04G3105 Ceratophyllum demersum HOM05D003714 ORTHO05D004379 3.0e-60 235.7 207 59.4
Lj3g0004216 Lotus japonicus HOM05D003714 ORTHO05D004379 3.9e-60 235.3 223 57.8
PSO339G1383 Papaver somniferum HOM05D003714 ORTHO05D004379 1.1e-59 233.8 217 57.6
TPR.G6161 Trifolium pratense HOM05D003714 ORTHO05D004379 1.1e-59 233.8 214 60.3
CANSAT54G2133 Cannabis sativa HOM05D003714 ORTHO05D004379 1.5e-59 233.4 212 59.0
Actinidia07147 Actinidia chinensis HOM05D003714 ORTHO05D004379 4.8e-58 228.4 212 56.1
PSO384G2520 Papaver somniferum HOM05D003714 ORTHO05D004379 4.8e-58 228.4 217 56.7
Rhsim01G0215800 Rhododendron simsii HOM05D003714 ORTHO05D004379 4.8e-58 228.4 221 58.4
MBI07_g42224_MAGBIO Magnolia biondii HOM05D003714 ORTHO05D004379 6.2e-58 228.0 204 58.8
ATR0048G003 Amborella trichopoda HOM05D003714 ORTHO05D004379 1.4e-57 226.9 215 57.2
vmacro14427 Vaccinium macrocarpon HOM05D003714 ORTHO05D004379 9.0e-57 224.2 220 56.4
CARHR274380 Cardamine hirsuta HOM05D003714 ORTHO05D004379 2.6e-56 222.6 218 55.0
AT5G60700 Arabidopsis thaliana HOM05D003714 ORTHO05D004379 4.5e-56 221.9 217 54.8
arahy.Tifrunner.gnm1.ann1.8QPZ90 Arachis hypogaea HOM05D003714 ORTHO05D004379 5.8e-56 221.5 242 51.2
AL8G37290 Arabidopsis lyrata HOM05D003714 ORTHO05D004379 4.9e-55 218.4 217 54.4
arahy.Tifrunner.gnm1.ann1.BKDH6Z Arachis hypogaea HOM05D003714 ORTHO05D004379 1.1e-54 217.2 235 52.3
PSO063G6987 Papaver somniferum HOM05D003714 ORTHO05D004379 1.4e-54 216.9 215 55.3
PSO339G1676 Papaver somniferum HOM05D003714 ORTHO05D004379 1.9e-54 216.5 215 55.3
BcaC03g13945 Brassica carinata HOM05D003714 ORTHO05D004379 2.4e-54 216.1 211 55.9
BraA02t05710Z Brassica rapa HOM05D003714 ORTHO05D004379 3.2e-54 215.7 211 55.9
A10p17940 Brassica napus HOM05D003714 ORTHO05D004379 4.2e-54 215.3 220 54.1
Aa31LG1G12660 Aethionema arabicum HOM05D003714 ORTHO05D004379 5.4e-54 214.9 219 53.4
BcaB08g36372 Brassica carinata HOM05D003714 ORTHO05D004379 5.4e-54 214.9 220 54.1
BNapus_Darmor_BZH_scaffold_38p00110 Brassica napus HOM05D003714 ORTHO05D004379 5.4e-54 214.9 211 55.9
C02p11520 Brassica napus HOM05D003714 ORTHO05D004379 5.4e-54 214.9 211 55.9
BolC2t07227H Brassica oleracea HOM05D003714 ORTHO05D004379 2.7e-53 212.6 213 54.9
BraA10t43869Z Brassica rapa HOM05D003714 ORTHO05D004379 3.5e-53 212.2 220 53.6
Carub.0008s2138 Capsella rubella HOM05D003714 ORTHO05D004379 3.5e-53 212.2 219 53.9
BcaB05g22662 Brassica carinata HOM05D003714 ORTHO05D004379 6.0e-53 211.5 214 54.2
Migut.N02587 Erythranthe guttata HOM05D003714 ORTHO05D004379 1.0e-52 210.7 224 53.6
CDE07G1448 Ceratophyllum demersum HOM05D003714 ORTHO05D004379 2.3e-52 209.5 216 52.3
BolC9t58217H Brassica oleracea HOM05D003714 ORTHO05D004379 3.9e-52 208.8 220 52.3
Thhalv10012601m.g Eutrema salsugineum HOM05D003714 ORTHO05D004379 5.1e-52 208.4 219 53.9
C09p53430 Brassica napus HOM05D003714 ORTHO05D004379 8.7e-52 207.6 220 51.8
THA.LOC104810862 Tarenaya hassleriana HOM05D003714 ORTHO05D004379 8.7e-52 207.6 223 52.0
Sp6g22270 Schrenkiella parvula HOM05D003714 ORTHO05D004379 7.4e-51 204.5 220 52.3
BcaC04g19732 Brassica carinata HOM05D003714 ORTHO05D004379 9.6e-51 204.1 220 50.9
Os02g0806500 Oryza sativa ssp. japonica HOM05D003714 ORTHO05D004379 8.1e-50 201.1 211 52.1
SGA_v2.0_scaffold116G32255 Striga asiatica HOM05D003714 ORTHO05D004379 2.4e-49 199.5 211 54.0
Zm00001eb258310 Zea mays HOM05D003714 ORTHO05D004379 1.2e-48 197.2 217 52.5
unitig_8.g3298 Utricularia gibba HOM05D003714 ORTHO05D004379 2.2e-47 193.0 201 55.2
unitig_27.g25054 Utricularia gibba HOM05D003714 ORTHO05D004379 6.5e-47 191.4 212 54.2
SEGI_21871 Sequoiadendron giganteum HOM05D003714 ORTHO05D004379 6.7e-44 181.4 217 47.0
Migut.O00751 Erythranthe guttata HOM05D003714 ORTHO05D004379 1.3e-39 167.2 104 76.9
Ca_20855_v3 Cicer arietinum L. HOM05D003714 ORTHO05D004379 3.8e-39 165.6 106 74.5
Mapoly0151s0026 Marchantia polymorpha HOM05D003714 ORTHO05D004379 1.5e-35 153.7 190 43.7
HPP92_025358 Vanilla planifolia HOM05D003714 ORTHO05D004379 4.3e-35 152.1 103 70.9
Dinv32729 Davidia involucrata HOM05D003714 ORTHO05D004379 2.6e-32 142.9 82 81.7
SMO165G0075 Selaginella moellendorffii HOM05D003714 ORTHO05D004379 2.6e-32 142.9 193 47.2
AagrBONN_evm.TU.Sc2ySwM_117.2800 Anthoceros agrestis HOM05D003714 ORTHO05D004379 3.4e-32 142.5 217 40.6
Pp3c3_14800 Physcomitrium patens HOM05D003714 ORTHO05D004379 3.4e-32 142.5 201 44.8
SEGI_02314 Sequoiadendron giganteum HOM05D003714 ORTHO05D004379 1.4e-30 137.1 149 49.0
unitig_8.g3002 Utricularia gibba HOM05D003714 ORTHO05D004379 1.2e-29 134.0 100 63.0
Pp3c3_5960 Physcomitrium patens HOM05D003714 ORTHO05D004379 1.6e-29 133.7 181 43.1
Actinidia13049 Actinidia chinensis HOM05D003714 ORTHO05D004379 3.6e-29 132.5 82 73.2
Cpa.g.sc279.5 Carica papaya HOM05D003714 ORTHO05D004379 5.1e-28 128.6 198 43.4
Pp3c4_16750 Physcomitrium patens HOM05D003714 ORTHO05D004379 1.5e-27 127.1 172 44.8
SEGI_03824 Sequoiadendron giganteum HOM05D003714 ORTHO05D004379 1.1e-25 120.9 218 37.6
SEGI_28974 Sequoiadendron giganteum HOM05D003714 ORTHO05D004379 2.4e-25 119.8 200 38.5
AagrBONN_evm.TU.Sc2ySwM_368.1662 Anthoceros agrestis HOM05D003714 ORTHO05D004379 2.6e-24 116.3 189 40.2
Actinidia03720 Actinidia chinensis HOM05D003714 ORTHO05D004379 3.8e-15 85.9 44 84.1


User provided reference genes

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