Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000100g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.9e-64 248.4 127 100.0
Nitab4.5_0000147g0090 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.2e-23 111.7 76 81.6
Nitab4.5_0000792g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.2e-22 110.2 67 88.1
Nitab4.5_0001651g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.0e-22 107.8 67 86.6
Nitab4.5_0002307g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.0e-21 107.1 64 87.5
Nitab4.5_0000022g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-21 106.7 67 85.1
Nitab4.5_0000231g0100 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-21 105.9 67 85.1
Nitab4.5_0000426g0250 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.3e-21 105.9 67 86.6
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.0e-21 105.5 66 84.8
Nitab4.5_0001172g0130 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.9e-21 105.1 66 83.3
Nitab4.5_0005112g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.9e-21 105.1 67 83.6
Nitab4.5_0001219g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.1e-21 104.8 67 83.6
Nitab4.5_0002569g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.7e-21 104.4 66 84.8
Nitab4.5_0000052g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.7e-21 104.0 65 84.6
Nitab4.5_0000058g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.3e-20 102.1 68 82.4
Nitab4.5_0000129g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.3e-20 102.1 67 82.1
Nitab4.5_0001276g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.4e-20 100.9 67 83.6
Nitab4.5_0001038g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-19 99.8 67 82.1
Nitab4.5_0012769g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 8.2e-19 97.4 59 84.7
Nitab4.5_0001215g0130 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.6e-17 92.4 57 84.2
Nitab4.5_0000143g0500 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.5e-17 91.7 56 87.5
Nitab4.5_0006239g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.2e-16 89.4 59 83.1
Nitab4.5_0000923g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.8e-16 88.6 53 83.0
Nitab4.5_0001701g0070 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.5e-15 84.7 67 71.6
Nitab4.5_0001576g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.4e-13 80.1 53 79.2
Nitab4.5_0002052g0150 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.5e-12 76.6 43 90.7
Nitab4.5_0003187g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.3e-12 75.1 86 47.7
Nitab4.5_0000020g0260 Nicotiana tabacum HOM05D000017 ORTHO05D009364 7.4e-12 74.3 65 66.2
Nitab4.5_0000800g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-11 73.6 42 85.7
Nitab4.5_0003726g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.2e-11 72.8 60 63.3
Nitab4.5_0008808g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.8e-11 72.4 61 62.3
Nitab4.5_0003518g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.7e-11 72.0 68 60.3
Nitab4.5_0001839g0080 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.3e-11 71.2 68 61.8
Nitab4.5_0010397g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.2e-11 70.9 51 70.6
Nitab4.5_0000495g0190 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.1e-10 70.5 65 63.1
Nitab4.5_0006785g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.1e-10 70.5 67 59.7
Nitab4.5_0000538g0180 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.4e-10 70.1 66 68.2
Nitab4.5_0001117g0050 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.4e-10 69.3 148 35.1
Nitab4.5_0005529g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.1e-10 68.9 58 62.1
Nitab4.5_0006809g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.1e-10 68.9 68 61.8
Nitab4.5_0000381g0310 Nicotiana tabacum HOM05D000017 ORTHO05D001349 5.3e-10 68.2 68 60.3
Nitab4.5_0000530g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 6.9e-10 67.8 51 66.7
Sopen09g008710 Solanum pennellii HOM05D000006 ORTHO05D000001 6.9e-10 67.8 60 56.7
Nitab4.5_0001839g0050 Nicotiana tabacum HOM05D000017 ORTHO05D012383 9.1e-10 67.4 69 56.5
Peaxi162Scf00890g00021 Petunia axillaris HOM05D000017 ORTHO05D001349 9.1e-10 67.4 109 37.6
Solyc05g047645.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 9.1e-10 67.4 59 57.6
Sopen03g017650 Solanum pennellii HOM05D000017 ORTHO05D000013 9.1e-10 67.4 59 57.6
Sopen04g018010 Solanum pennellii HOM05D000017 ORTHO05D001349 9.1e-10 67.4 59 57.6
Sopen05g030950 Solanum pennellii HOM05D000017 ORTHO05D000013 9.1e-10 67.4 59 57.6
Sopen11g009200 Solanum pennellii HOM05D000004 ORTHO05D000002 9.1e-10 67.4 59 57.6
Sopen12g009320 Solanum pennellii HOM05D000002 ORTHO05D000001 9.1e-10 67.4 59 57.6
Nitab4.5_0009942g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.2e-09 67.0 43 76.7
Peaxi162Scf00802g00027 Petunia axillaris HOM05D000017 ORTHO05D001349 2.6e-09 65.9 59 54.2
Sopen10g011920 Solanum pennellii HOM05D000017 ORTHO05D001349 4.5e-09 65.1 59 55.9
Nitab4.5_0004383g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 7.7e-09 64.3 71 53.5
Nitab4.5_0000072g0580 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.0e-08 63.9 94 45.7
Nitab4.5_0001288g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.3e-08 63.5 63 60.3
Nitab4.5_0002172g0110 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.3e-08 63.5 67 56.7
Nitab4.5_0003857g0070 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.2e-08 62.8 38 78.9
Nitab4.5_0009005g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.2e-08 62.8 65 52.3
Peaxi162Scf00406g00417 Petunia axillaris HOM05D000017 ORTHO05D009364 2.2e-08 62.8 53 56.6
Nitab4.5_0011664g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.9e-08 62.4 44 70.5
Nitab4.5_0000173g0280 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.8e-08 62.0 60 53.3
Nitab4.5_0000202g0420 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.0e-08 61.6 67 52.2
Nitab4.5_0015725g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.0e-08 61.6 56 64.3
Peaxi162Scf00448g00049 Petunia axillaris HOM05D000017 ORTHO05D009364 1.1e-07 60.5 46 63.0
Nitab4.5_0000685g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.9e-07 59.7 53 58.5
Nitab4.5_0001495g0110 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.9e-07 59.7 30 90.0
Peaxi162Scf00365g00058 Petunia axillaris HOM05D000017 ORTHO05D001349 1.9e-07 59.7 67 47.8
Nitab4.5_0008946g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.5e-07 59.3 48 62.5
Peaxi162Scf00089g00005 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-07 58.9 68 47.1
Peaxi162Scf00100g00816 Petunia axillaris HOM05D000017 ORTHO05D009364 3.2e-07 58.9 62 46.8
Peaxi162Scf00147g00129 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-07 58.9 62 46.8
Peaxi162Scf00209g00944 Petunia axillaris HOM05D000017 ORTHO05D009364 3.2e-07 58.9 62 46.8
Peaxi162Scf00828g00416 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-07 58.9 62 46.8
Peaxi162Scf01691g00012 Petunia axillaris HOM05D000017 ORTHO05D001349 3.2e-07 58.9 63 46.0
Peaxi162Scf00090g00083 Petunia axillaris HOM05D000017 ORTHO05D001349 4.2e-07 58.5 63 46.0
Peaxi162Scf00131g00813 Petunia axillaris HOM05D000017 ORTHO05D001349 5.5e-07 58.2 67 47.8
Nitab4.5_0000270g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.2e-07 57.8 46 63.0
Peaxi162Scf00068g02417 Petunia axillaris HOM05D000017 ORTHO05D030244 9.4e-07 57.4 51 58.8
Peaxi162Scf00929g00712 Petunia axillaris HOM05D000017 ORTHO05D001349 9.4e-07 57.4 51 52.9
Nitab4.5_0003360g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.2e-06 57.0 76 42.1
Nitab4.5_0006105g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.2e-06 57.0 38 68.4
Solyc02g062435.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 1.2e-06 57.0 52 51.9
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-06 56.6 48 58.3
Peaxi162Scf00322g00921 Petunia axillaris HOM05D000017 ORTHO05D009364 1.6e-06 56.6 47 55.3
Solyc08g150149.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.6e-06 56.6 53 52.8
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 1.6e-06 56.6 60 46.7
Nitab4.5_0000936g0100 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.1e-06 56.2 29 89.7
Peaxi162Scf00897g00039 Petunia axillaris HOM05D000017 ORTHO05D001349 2.1e-06 56.2 61 45.9
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 2.1e-06 56.2 46 58.7
Sopen06g010760 Solanum pennellii HOM05D000017 ORTHO05D001349 2.7e-06 55.8 59 49.2
Sopen12g023710 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-06 55.8 85 42.4
Nitab4.5_0002608g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.6e-06 55.5 52 57.7
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.6e-06 55.5 81 42.0
Solyc03g122210.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 3.6e-06 55.5 62 50.0
Solyc09g008110.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 3.6e-06 55.5 62 50.0
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.5 62 50.0
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.5 62 50.0
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 3.6e-06 55.5 62 50.0
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.5 62 50.0
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.5 62 50.0
Sopen07g012470 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.5 62 50.0
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 3.6e-06 55.5 57 52.6
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.5 62 50.0
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.5 62 50.0
Nitab4.5_0003409g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.7e-06 55.1 67 47.8
Peaxi162Scf00137g00149 Petunia axillaris HOM05D000017 ORTHO05D001349 4.7e-06 55.1 62 43.5
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 4.7e-06 55.1 53 52.8
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-06 55.1 53 52.8
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 4.7e-06 55.1 53 52.8
Sopen07g022680 Solanum pennellii HOM05D000017 ORTHO05D013101 4.7e-06 55.1 53 52.8
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 4.7e-06 55.1 53 52.8
PGSC0003DMG400002554 Solanum tuberosum HOM05D000017 ORTHO05D009364 4.7e-06 55.1 62 50.0
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 4.7e-06 55.1 50 52.0
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 4.7e-06 55.1 53 54.7
Nitab4.5_0000442g0270 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.1e-06 54.7 29 86.2
Nitab4.5_0002006g0120 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.1e-06 54.7 64 46.9
Nitab4.5_0006415g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.1e-06 54.7 68 48.5
Peaxi162Scf00234g00032 Petunia axillaris HOM05D000017 ORTHO05D001349 6.1e-06 54.7 113 34.5
Peaxi162Scf00795g00002 Petunia axillaris HOM05D000017 ORTHO05D009364 6.1e-06 54.7 51 52.9
Peaxi162Scf00851g00031 Petunia axillaris HOM05D000017 ORTHO05D001349 6.1e-06 54.7 62 45.2
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 6.1e-06 54.7 62 50.0
Nitab4.5_0003885g0050 Nicotiana tabacum HOM05D000017 ORTHO05D012383 7.9e-06 54.3 66 42.4
Nitab4.5_0012220g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 7.9e-06 54.3 81 40.7
Peaxi162Scf00228g00086 Petunia axillaris HOM05D000017 ORTHO05D015725 7.9e-06 54.3 63 50.8


User provided reference genes

Program Settings