Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000098g0020 Nicotiana tabacum HOM05D000881 ORTHO05D000666 2.7e-83 312.0 161 100.0
Nitab4.5_0009220g0020 Nicotiana tabacum HOM05D000881 ORTHO05D000666 6.2e-48 194.5 118 87.3
Peaxi162Scf00061g00281 Petunia axillaris HOM05D000881 ORTHO05D000666 1.0e-37 160.6 111 76.6
Nitab4.5_0000123g0010 Nicotiana tabacum HOM05D000881 ORTHO05D000666 1.2e-27 127.1 119 53.8
Peaxi162Scf00003g05370 Petunia axillaris HOM05D000881 ORTHO05D000666 1.1e-25 120.6 112 58.0
Nitab4.5_0002131g0030 Nicotiana tabacum HOM05D000881 ORTHO05D000666 2.4e-23 112.8 124 53.2
CAN.G959.50 Capsicum annuum HOM05D000881 ORTHO05D000666 1.0e-21 107.5 110 55.5
PGSC0003DMG400007210 Solanum tuberosum HOM05D000881 ORTHO05D000666 1.9e-20 103.2 106 52.8
Nitab4.5_0009220g0010 Nicotiana tabacum HOM05D000881 ORTHO05D000666 2.6e-17 92.8 127 43.3
Nitab4.5_0000098g0010 Nicotiana tabacum HOM05D000881 ORTHO05D000666 6.3e-16 88.2 128 42.2
Sopen10g028570 Solanum pennellii HOM05D000881 ORTHO05D000666 5.3e-15 85.1 66 60.6
Solyc10g076880.2 Solanum lycopersicum HOM05D000881 ORTHO05D000666 1.0e-13 80.9 66 57.6
Dinv25100 Davidia involucrata HOM05D000881 ORTHO05D000666 3.0e-10 69.3 144 34.0
HanXRQChr11g0347921 Helianthus annuus HOM05D000881 ORTHO05D000666 1.1e-09 67.4 75 49.3
HanXRQChr01g0026391 Helianthus annuus HOM05D000881 ORTHO05D000666 5.7e-09 65.1 132 38.6
ECA248G1779 Erigeron canadensis HOM05D002395 ORTHO05D000666 9.7e-09 64.3 76 39.5
Lsat_1_v5_gn_1_56241 Lactuca sativa HOM05D000881 ORTHO05D000666 2.2e-08 63.2 71 45.1
Dinv03863 Davidia involucrata HOM05D000881 ORTHO05D000666 2.8e-08 62.8 104 43.3
COL.COLO4_32969 Corchorus olitorius HOM05D000881 ORTHO05D000666 3.7e-08 62.4 101 32.7
Dinv25102 Davidia involucrata HOM05D000881 ORTHO05D000666 3.7e-08 62.4 141 33.3
Potri.013G054900 Populus trichocarpa HOM05D000881 ORTHO05D000666 1.1e-07 60.8 86 37.2
Psat4g053640 Pisum sativum HOM05D000881 ORTHO05D000666 1.4e-07 60.5 87 35.6
PGR119G0695 Punica granatum HOM05D000881 ORTHO05D000666 1.4e-07 60.5 85 37.6
QL01p018558 Quercus lobata HOM05D000881 ORTHO05D000666 1.4e-07 60.5 75 45.3
DCAR_009079 Daucus carota HOM05D000881 ORTHO05D000666 2.4e-07 59.7 76 42.1
arahy.Tifrunner.gnm1.ann1.1N783C Arachis hypogaea HOM05D000881 ORTHO05D000666 4.1e-07 58.9 89 38.2
arahy.Tifrunner.gnm1.ann1.IYC01E Arachis hypogaea HOM05D000881 ORTHO05D000666 4.1e-07 58.9 89 38.2
Migut.L01864 Erythranthe guttata HOM05D000881 ORTHO05D000666 4.1e-07 58.9 67 49.3
CANSAT78G1545 Cannabis sativa HOM05D000881 ORTHO05D000666 9.1e-07 57.8 138 34.1
MBI05_g04123_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 1.2e-06 57.4 83 38.6
Potri.004G191101 Populus trichocarpa HOM05D000881 ORTHO05D000666 1.2e-06 57.4 63 47.6
Potri.004G191200 Populus trichocarpa HOM05D000881 ORTHO05D000666 1.2e-06 57.4 63 47.6
Sabra04G0129700 Salix brachista HOM05D000881 ORTHO05D000666 1.2e-06 57.4 70 40.0
Sabra04G0129800 Salix brachista HOM05D000881 ORTHO05D000666 1.6e-06 57.0 71 39.4
CDE04G0961 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 2.0e-06 56.6 60 48.3
Oeu044647.1 Olea europaea HOM05D000881 ORTHO05D000666 2.0e-06 56.6 67 47.8
Sabra09G0120800 Salix brachista HOM05D000881 ORTHO05D000666 2.0e-06 56.6 65 44.6
AT1G54400 Arabidopsis thaliana HOM05D000881 ORTHO05D000666 2.6e-06 56.2 131 36.6
Manes.09G138800 Manihot esculenta HOM05D000881 ORTHO05D000666 2.6e-06 56.2 73 41.1
Lj4g0004603 Lotus japonicus HOM05D000881 ORTHO05D000666 3.5e-06 55.8 77 36.4
Medtr4g107860 Medicago truncatula HOM05D000881 ORTHO05D000666 3.5e-06 55.8 64 42.2
MELO3C015587.2 Cucumis melo HOM05D000881 ORTHO05D000666 4.5e-06 55.5 59 47.5
MELO3C015589.2 Cucumis melo HOM05D000881 ORTHO05D000666 4.5e-06 55.5 59 47.5
Dinv05245 Davidia involucrata HOM05D000881 ORTHO05D000666 4.5e-06 55.5 72 40.3
Lalb_Chr12g0196721 Lupinus albus HOM05D000881 ORTHO05D000666 4.5e-06 55.5 81 34.6
CsaV3_1G041730 Cucumis sativus L. HOM05D000881 ORTHO05D000666 5.9e-06 55.1 58 50.0
Dinv11927 Davidia involucrata HOM05D000881 ORTHO05D000666 5.9e-06 55.1 91 38.5
Duzib177G0536 Durio zibethinus HOM05D000881 ORTHO05D000666 5.9e-06 55.1 98 32.7
Actinidia03944 Actinidia chinensis HOM05D000881 ORTHO05D000666 7.7e-06 54.7 81 37.0
arahy.Tifrunner.gnm1.ann1.Y8A2Y7 Arachis hypogaea HOM05D000881 ORTHO05D000666 7.7e-06 54.7 101 38.6
CDE07G1560 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 7.7e-06 54.7 63 46.0
AUR62036273 Chenopodium quinoa HOM05D000881 ORTHO05D000666 7.7e-06 54.7 74 41.9
Ca_21846_v3 Cicer arietinum L. HOM05D000259 ORTHO05D000155 7.7e-06 54.7 81 39.5
TPR.G38378 Trifolium pratense HOM05D000881 ORTHO05D000666 7.7e-06 54.7 64 40.6


User provided reference genes

Program Settings