Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000097g0040 Nicotiana tabacum HOM05D001777 ORTHO05D001809 8.7e-79 297.0 157 100.0
Nitab4.5_0007626g0020 Nicotiana tabacum HOM05D001777 ORTHO05D022142 6.7e-55 217.6 156 78.8
Peaxi162Scf00231g00335 Petunia axillaris HOM05D001777 ORTHO05D001809 7.4e-38 161.0 163 63.8
Sopen12g003170 Solanum pennellii HOM05D001777 ORTHO05D001809 3.5e-35 152.1 161 59.6
Sopen07g008660 Solanum pennellii HOM05D001777 ORTHO05D001809 5.0e-34 148.3 159 62.3
Solyc07g020710.3 Solanum lycopersicum HOM05D001777 ORTHO05D001809 1.1e-33 147.1 159 62.3
Nitab4.5_0004391g0040 Nicotiana tabacum HOM05D001777 ORTHO05D001809 3.2e-33 145.6 167 57.5
Nitab4.5_0003733g0040 Nicotiana tabacum HOM05D001777 ORTHO05D001809 8.0e-32 141.0 167 56.3
Peaxi162Scf01363g00034 Petunia axillaris HOM05D001777 ORTHO05D001809 5.2e-31 138.3 161 57.8
Dinv41623 Davidia involucrata HOM05D001777 ORTHO05D001809 3.1e-28 129.0 157 52.9
CSS0026707 Camellia sinensis var. sinensis HOM05D001777 ORTHO05D022142 1.2e-24 117.1 159 52.2
Actinidia09430 Actinidia chinensis HOM05D001777 ORTHO05D001809 8.8e-23 110.9 157 51.6
Dinv36655 Davidia involucrata HOM05D001777 ORTHO05D001809 3.4e-22 109.0 161 49.7
Hma1.2p1_1151F.1_g261960 Hydrangea macrophylla HOM05D001777 ORTHO05D001809 3.4e-22 109.0 156 48.7
CANSAT02G0003 Cannabis sativa HOM05D001777 ORTHO05D001809 1.3e-21 107.1 159 49.7
MSTRG.19575 Avicennia marina HOM05D001777 ORTHO05D001809 2.2e-21 106.3 158 43.7
SGA_v2.0_scaffold129G34147 Striga asiatica HOM05D001777 ORTHO05D001809 2.2e-21 106.3 162 46.9
PGSC0003DMG401000306 Solanum tuberosum HOM05D001777 ORTHO05D001809 3.7e-21 105.5 90 66.7
SGA_v2.0_scaffold19G08763 Striga asiatica HOM05D001777 ORTHO05D001809 3.7e-21 105.5 162 46.3
Oeu018439.2 Olea europaea HOM05D001777 ORTHO05D001809 1.4e-20 103.6 158 48.1
Lalb_Chr16g0388091 Lupinus albus HOM05D001777 ORTHO05D001809 1.8e-20 103.2 157 47.1
Cc06_g09920 Coffea canephora HOM05D001777 ORTHO05D001809 3.1e-20 102.4 167 44.3
MSTRG.6010 Avicennia marina HOM05D001777 ORTHO05D001809 4.1e-20 102.1 160 46.2
HanXRQChr06g0179211 Helianthus annuus HOM05D001777 ORTHO05D001809 5.4e-20 101.7 167 49.7
Oeu002247.1 Olea europaea HOM05D001777 ORTHO05D001809 7.0e-20 101.3 158 49.4
CSS0046187 Camellia sinensis var. sinensis HOM05D001777 ORTHO05D001809 1.7e-18 96.7 157 46.5
TWI34G0244 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 1.7e-18 96.7 160 44.4
Atru.chr7.1370 Acer truncatum HOM05D001777 ORTHO05D001809 2.3e-18 96.3 159 46.5
Gohir.A07G005200 Gossypium hirsutum HOM05D001777 ORTHO05D001809 2.9e-18 95.9 161 46.6
Cpa.g.sc23.80 Carica papaya HOM05D001777 ORTHO05D022142 3.8e-18 95.5 158 46.8
Gohir.D07G006900 Gossypium hirsutum HOM05D001777 ORTHO05D001809 6.5e-18 94.7 160 45.6
Manes.16G113800 Manihot esculenta HOM05D001777 ORTHO05D001809 6.5e-18 94.7 158 46.8
Lalb_Chr05g0222991 Lupinus albus HOM05D001777 ORTHO05D001809 1.1e-17 94.0 156 48.1
CiPaw.04G162700 Carya illinoinensis HOM05D001777 ORTHO05D001809 1.5e-17 93.6 161 46.0
TWI63G1363 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 1.5e-17 93.6 156 41.7
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 2.5e-17 92.8 156 42.9
Duzib168G0347 Durio zibethinus HOM05D001777 ORTHO05D001809 3.3e-17 92.4 160 44.4
Migut.K00502 Erythranthe guttata HOM05D001777 ORTHO05D001809 3.3e-17 92.4 157 42.0
PGR142G3402 Punica granatum HOM05D001777 ORTHO05D001809 9.5e-17 90.9 162 44.4
MD15G1181800 Malus domestica HOM05D001777 ORTHO05D001809 1.2e-16 90.5 160 43.1
ClCG06G008750 Citrullus lanatus HOM05D001777 ORTHO05D001809 2.8e-16 89.4 152 45.4
Lsat_1_v5_gn_8_105060 Lactuca sativa HOM05D001777 ORTHO05D001809 8.0e-16 87.8 170 45.3
RcHm_v2.0_Chr2g0089991 Rosa chinensis HOM05D001777 ORTHO05D001809 1.0e-15 87.4 158 42.4
Sed0004736 Sechium edule HOM05D001777 ORTHO05D001809 1.0e-15 87.4 156 46.2
FAN28G2425 Fragaria x ananassa HOM05D001777 ORTHO05D001809 1.4e-15 87.0 161 42.2
Solyc12g007190.2 Solanum lycopersicum HOM05D001777 ORTHO05D001809 1.8e-15 86.7 123 51.2
THA.LOC104814714 Tarenaya hassleriana HOM05D001777 ORTHO05D001809 2.3e-15 86.3 155 43.2
FAN26G2851 Fragaria x ananassa HOM05D001777 ORTHO05D001809 4.0e-15 85.5 158 43.0
CsaV3_2G002160 Cucumis sativus L. HOM05D001777 ORTHO05D001809 8.9e-15 84.3 156 43.6
Duzib150G0851 Durio zibethinus HOM05D001777 ORTHO05D001809 8.9e-15 84.3 159 44.7
Gorai.001G006500 Gossypium raimondii HOM05D001777 ORTHO05D001809 8.9e-15 84.3 160 43.8
Thecc.09G107200 Theobroma cacao HOM05D001777 ORTHO05D001809 1.2e-14 84.0 157 43.9
Duzib187G1031 Durio zibethinus HOM05D001777 ORTHO05D001809 3.4e-14 82.4 171 42.1
MD02G1043000 Malus domestica HOM05D001777 ORTHO05D001809 3.4e-14 82.4 160 41.2
Rhsim01G0100700 Rhododendron simsii HOM05D001777 ORTHO05D001809 3.4e-14 82.4 156 42.3
TAR636G1673 Trochodendron aralioides HOM05D001777 ORTHO05D001809 3.4e-14 82.4 159 41.5
ClCG11G002370 Citrullus lanatus HOM05D001777 ORTHO05D001809 4.4e-14 82.0 156 42.9
EL10Ac8g18443 Beta vulgaris HOM05D001777 ORTHO05D001809 5.7e-14 81.6 167 40.7
TAR626G1043 Trochodendron aralioides HOM05D001777 ORTHO05D001809 5.7e-14 81.6 156 39.7
CiPaw.03G229200 Carya illinoinensis HOM05D001777 ORTHO05D001809 7.5e-14 81.3 159 41.5
Hund26224 Selenicereus undatus HOM05D001777 ORTHO05D001809 9.8e-14 80.9 154 40.3
Rhsim03G0240100 Rhododendron simsii HOM05D001777 ORTHO05D001809 1.7e-13 80.1 153 41.8
CsaV3_1G045720 Cucumis sativus L. HOM05D001777 ORTHO05D001809 2.2e-13 79.7 133 45.1
THA.LOC104820052 Tarenaya hassleriana HOM05D001777 ORTHO05D001809 2.2e-13 79.7 156 42.9
Gohir.A06G064200 Gossypium hirsutum HOM05D001777 ORTHO05D001809 8.3e-13 77.8 159 40.9
Sed0009271 Sechium edule HOM05D001777 ORTHO05D001809 1.1e-12 77.4 156 39.7
QL02p045836 Quercus lobata HOM05D001777 ORTHO05D001809 1.4e-12 77.0 160 43.1
THA.LOC104804023 Tarenaya hassleriana HOM05D001777 ORTHO05D001809 1.4e-12 77.0 158 41.8
Lalb_Chr14g0371611 Lupinus albus HOM05D001777 ORTHO05D001809 1.8e-12 76.6 158 40.5
Oeu060210.1 Olea europaea HOM05D001777 ORTHO05D001809 1.8e-12 76.6 148 41.2
Psat7g015200 Pisum sativum HOM05D001777 ORTHO05D001809 1.8e-12 76.6 157 38.2
VMungo0251G0965 Vigna mungo HOM05D001777 ORTHO05D001809 7.0e-12 74.7 154 40.3
ECA240G4062 Erigeron canadensis HOM05D001777 ORTHO05D001809 9.2e-12 74.3 145 41.4
Cfa003236 Carpinus fangiana HOM05D001777 ORTHO05D001809 1.2e-11 73.9 157 41.4
Psat1g043480 Pisum sativum HOM05D001777 ORTHO05D001809 1.2e-11 73.9 161 44.1
VMungo0464G1602 Vigna mungo HOM05D001777 ORTHO05D001809 1.6e-11 73.6 160 40.6
Glyma.05G229900 Glycine max HOM05D001777 ORTHO05D001809 2.0e-11 73.2 154 38.3
Manes.03G023000 Manihot esculenta HOM05D001777 ORTHO05D001809 2.0e-11 73.2 156 39.7
Actinidia32674 Actinidia chinensis HOM05D001777 ORTHO05D001809 2.7e-11 72.8 127 43.3
HanXRQChr05g0143121 Helianthus annuus HOM05D001777 ORTHO05D001809 2.7e-11 72.8 165 41.8
TPR.G23470 Trifolium pratense HOM05D001777 ORTHO05D001809 2.7e-11 72.8 157 38.2
AL7G23460 Arabidopsis lyrata HOM05D001777 ORTHO05D001809 3.5e-11 72.4 164 40.2
AT4G29000 Arabidopsis thaliana HOM05D001777 ORTHO05D001809 3.5e-11 72.4 161 42.9
Lj4C456G5 Lonicera japonica HOM05D001777 ORTHO05D001809 3.5e-11 72.4 138 43.5
SHI02733 Sapria himalayana HOM05D001777 ORTHO05D001809 3.5e-11 72.4 156 39.7
Actinidia07406 Actinidia chinensis HOM05D001777 ORTHO05D001809 4.5e-11 72.0 127 44.1
Ah.14g082350 Amaranthus hybridus HOM05D001777 ORTHO05D001809 4.5e-11 72.0 159 37.7
Ca_20228_v3 Cicer arietinum L. HOM05D001777 ORTHO05D001809 5.9e-11 71.6 164 40.2
DCAR_028697 Daucus carota HOM05D001777 ORTHO05D001809 5.9e-11 71.6 157 42.0
Glyma.08G037400 Glycine max HOM05D001777 ORTHO05D001809 5.9e-11 71.6 154 39.0
Nn2g11678 Nelumbo nucifera HOM05D001777 ORTHO05D001809 5.9e-11 71.6 157 39.5
Dinv14241 Davidia involucrata HOM05D001777 ORTHO05D001809 7.8e-11 71.2 154 42.9
arahy.Tifrunner.gnm1.ann1.549WES Arachis hypogaea HOM05D001777 ORTHO05D001809 1.0e-10 70.9 159 39.6
Manes.16G071700 Manihot esculenta HOM05D001777 ORTHO05D001809 1.3e-10 70.5 149 43.0
arahy.Tifrunner.gnm1.ann1.3BD8CQ Arachis hypogaea HOM05D001777 ORTHO05D001809 1.7e-10 70.1 155 40.0
MELO3C024686.2 Cucumis melo HOM05D001777 ORTHO05D001809 1.7e-10 70.1 134 44.0
Solyc12g007180.2 Solanum lycopersicum HOM05D001777 ORTHO05D001809 1.7e-10 70.1 43 76.7
Aa31LG8G17070 Aethionema arabicum HOM05D001777 ORTHO05D001809 2.3e-10 69.7 156 39.1
Sabra18G0070800 Salix brachista HOM05D001777 ORTHO05D001809 2.3e-10 69.7 156 38.5
Ca_17327_v3 Cicer arietinum L. HOM05D001777 ORTHO05D001809 2.9e-10 69.3 158 38.0
Phvul.002G312004 Phaseolus vulgaris HOM05D001777 ORTHO05D001809 2.9e-10 69.3 154 37.0
Phvul.002G312100 Phaseolus vulgaris HOM05D001777 ORTHO05D001809 2.9e-10 69.3 154 37.0
Medtr6g087590 Medicago truncatula HOM05D001777 ORTHO05D001809 3.8e-10 68.9 168 38.7
Medtr8g103320 Medicago truncatula HOM05D001777 ORTHO05D001809 3.8e-10 68.9 156 37.8
Lj2g0010550 Lotus japonicus HOM05D001777 ORTHO05D001809 5.0e-10 68.6 157 40.8
Phvul.004G164700 Phaseolus vulgaris HOM05D001777 ORTHO05D001809 8.6e-10 67.8 157 38.2
Sp7g26940 Schrenkiella parvula HOM05D001777 ORTHO05D001809 1.5e-09 67.0 164 35.4
MELO3C004566.2 Cucumis melo HOM05D001777 ORTHO05D001809 2.5e-09 66.2 179 35.8
Dinv38017 Davidia involucrata HOM05D001777 ORTHO05D001809 2.5e-09 66.2 158 37.3
CAN.G1774.12 Capsicum annuum HOM05D001777 ORTHO05D001809 3.3e-09 65.9 37 81.1
TWI34G1942 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 3.3e-09 65.9 160 39.4
CSS0016045 Camellia sinensis var. sinensis HOM05D001777 ORTHO05D001809 4.3e-09 65.5 148 39.9
MBI04_g19179_MAGBIO Magnolia biondii HOM05D001777 ORTHO05D001809 4.3e-09 65.5 148 35.8
GSVIVG01015363001 Vitis vinifera HOM05D001777 ORTHO05D001809 4.3e-09 65.5 50 68.0
Nn3g18097 Nelumbo nucifera HOM05D001777 ORTHO05D001809 5.6e-09 65.1 157 37.6
Sp3g33400 Schrenkiella parvula HOM05D001777 ORTHO05D001809 5.6e-09 65.1 152 36.8
Aa31LG2G21330 Aethionema arabicum HOM05D001777 ORTHO05D001809 7.3e-09 64.7 151 37.7
Potri.006G160400 Populus trichocarpa HOM05D001777 ORTHO05D001809 7.3e-09 64.7 156 39.1
BcaNung01338 Brassica carinata HOM05D001777 ORTHO05D001809 9.5e-09 64.3 156 37.2
Carub.0003s3438 Capsella rubella HOM05D001777 ORTHO05D001809 9.5e-09 64.3 154 38.3
CDE05G2249 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 1.2e-08 63.9 137 37.2
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 1.6e-08 63.5 151 38.4
FAN23G1238 Fragaria x ananassa HOM05D001777 ORTHO05D001809 2.1e-08 63.2 157 35.0
Gohir.D06G062800 Gossypium hirsutum HOM05D001777 ORTHO05D001809 2.1e-08 63.2 157 37.6
Gorai.010G073200 Gossypium raimondii HOM05D001777 ORTHO05D001809 2.1e-08 63.2 157 37.6
TPR.G10044 Trifolium pratense HOM05D001777 ORTHO05D001809 2.1e-08 63.2 128 38.3
CARHR236730 Cardamine hirsuta HOM05D001777 ORTHO05D001809 2.8e-08 62.8 153 39.9
Thhalv10024708m.g Eutrema salsugineum HOM05D001777 ORTHO05D001809 2.8e-08 62.8 156 37.2
Thhalv10001964m.g Eutrema salsugineum HOM05D001777 ORTHO05D001809 3.6e-08 62.4 152 36.2
Carub.0007s1164 Capsella rubella HOM05D001777 ORTHO05D001809 4.7e-08 62.0 155 36.8
GSVIVG01035652001 Vitis vinifera HOM05D001777 ORTHO05D001809 6.1e-08 61.6 133 40.6
Cfa013351 Carpinus fangiana HOM05D001777 ORTHO05D001809 8.0e-08 61.2 162 36.4
Gohir.A06G094200 Gossypium hirsutum HOM05D001777 ORTHO05D001809 1.4e-07 60.5 158 36.7
CDE05G2495 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 1.8e-07 60.1 137 35.8
Ciclev10007737m.g Citrus clementina HOM05D001777 ORTHO05D001809 1.8e-07 60.1 163 33.1
AT2G20110 Arabidopsis thaliana HOM05D001777 ORTHO05D001809 2.3e-07 59.7 158 38.6
PSO566G0205 Papaver somniferum HOM05D001777 ORTHO05D001809 2.3e-07 59.7 190 34.2
Sabra06G0124100 Salix brachista HOM05D001777 ORTHO05D001809 2.3e-07 59.7 37 81.1
Sc09g0009190 Simmondsia chinensis HOM05D001777 ORTHO05D001809 2.3e-07 59.7 140 37.1
Lalb_Chr08g0243181 Lupinus albus HOM05D001777 ORTHO05D001809 3.0e-07 59.3 156 39.1
Gorai.010G108300 Gossypium raimondii HOM05D001777 ORTHO05D001809 4.0e-07 58.9 158 36.1
MBI01_g30744_MAGBIO Magnolia biondii HOM05D001777 ORTHO05D001809 4.0e-07 58.9 141 34.0
TWI32G1232 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 8.9e-07 57.8 166 37.3
Aqoxy7G01584 Aquilegia oxysepala HOM05D001777 ORTHO05D001809 1.2e-06 57.4 169 33.1
arahy.Tifrunner.gnm1.ann1.9CNE94 Arachis hypogaea HOM05D001777 ORTHO05D001809 1.2e-06 57.4 157 36.9
BcaC07g38362 Brassica carinata HOM05D001777 ORTHO05D001809 1.2e-06 57.4 151 35.8
C08p11100 Brassica napus HOM05D001777 ORTHO05D001809 1.2e-06 57.4 151 35.8
Os01g0761100 Oryza sativa ssp. japonica HOM05D001777 ORTHO05D001809 1.2e-06 57.4 147 34.7
CiPaw.07G205900 Carya illinoinensis HOM05D001777 ORTHO05D001809 1.5e-06 57.0 163 38.0
MD15G1096100 Malus domestica HOM05D001777 ORTHO05D001809 1.5e-06 57.0 145 37.2
BcaNung00441 Brassica carinata HOM05D001777 ORTHO05D001809 2.0e-06 56.6 148 36.5
Nitab4.5_0005761g0110 Nicotiana tabacum HOM05D001777 ORTHO05D001809 2.0e-06 56.6 104 44.2
Actinidia20388 Actinidia chinensis HOM05D001777 ORTHO05D001809 2.6e-06 56.2 156 32.1
arahy.Tifrunner.gnm1.ann1.I31YLB Arachis hypogaea HOM05D001777 ORTHO05D001809 2.6e-06 56.2 157 36.9
Haze_25770 Corylus avellana HOM05D001777 ORTHO05D001809 2.6e-06 56.2 37 75.7
HPP92_020197 Vanilla planifolia HOM05D001777 ORTHO05D001809 2.6e-06 56.2 128 36.7
SEGI_14914 Sequoiadendron giganteum HOM05D001777 ORTHO05D001809 3.4e-06 55.8 38 68.4
Haze_21870 Corylus avellana HOM05D001777 ORTHO05D001809 4.4e-06 55.5 162 37.0
Eucgr.C01266 Eucalyptus grandis HOM05D001777 ORTHO05D001809 4.4e-06 55.5 156 37.2
Lj4C435T2 Lonicera japonica HOM05D001777 ORTHO05D001809 4.4e-06 55.5 37 75.7
Zm00001eb152420 Zea mays HOM05D001777 ORTHO05D001809 4.4e-06 55.5 144 38.2
Actinidia13319 Actinidia chinensis HOM05D001777 ORTHO05D001809 5.8e-06 55.1 146 34.9
A07p00570 Brassica napus HOM05D001777 ORTHO05D001809 5.8e-06 55.1 152 36.2
Duzib168G0730 Durio zibethinus HOM05D001777 ORTHO05D001809 5.8e-06 55.1 165 37.0
Gohir.D06G093800 Gossypium hirsutum HOM05D001777 ORTHO05D001809 5.8e-06 55.1 151 38.4
Lj1g0027837 Lotus japonicus HOM05D001777 ORTHO05D001809 5.8e-06 55.1 142 36.6
FvH4_1g04340 Fragaria vesca HOM05D001777 ORTHO05D001809 7.5e-06 54.7 158 34.2
PSO782G0870 Papaver somniferum HOM05D001777 ORTHO05D001809 7.5e-06 54.7 190 32.1
HPP92_021509 Vanilla planifolia HOM05D001777 ORTHO05D001809 7.5e-06 54.7 139 36.0
Zm00001eb370470 Zea mays HOM05D001777 ORTHO05D001809 9.8e-06 54.3 146 36.3


User provided reference genes

Program Settings