Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 2.4e-107 392.1 193 100.0
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 3.1e-86 322.0 180 90.6
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 3.1e-70 268.9 181 78.5
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 3.8e-68 261.9 179 76.5
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 1.1e-67 260.4 179 76.5
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 4.2e-67 258.5 179 77.1
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 9.4e-67 257.3 179 76.0
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 3.6e-66 255.4 187 77.5
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 3.7e-47 192.2 180 60.0
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 1.8e-46 189.9 156 64.7
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 3.8e-44 182.2 150 62.7
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 5.0e-44 181.8 147 63.3
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 8.5e-44 181.0 160 60.0
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 3.2e-43 179.1 158 60.1
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 4.2e-43 178.7 183 55.2
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 9.4e-43 177.6 183 55.2
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 9.4e-43 177.6 184 54.3
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 2.7e-42 176.0 184 55.4
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 2.7e-42 176.0 137 66.4
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 3.6e-42 175.6 184 54.9
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 1.4e-41 173.7 179 55.3
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 3.0e-41 172.6 183 53.0
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 3.0e-41 172.6 156 58.3
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 8.8e-41 171.0 137 65.7
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 8.8e-41 171.0 137 64.2
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 8.8e-41 171.0 169 57.4
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 2.0e-40 169.9 110 80.0
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 4.4e-40 168.7 129 67.4
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 4.4e-40 168.7 129 67.4
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 4.4e-40 168.7 152 59.2
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 4.4e-40 168.7 129 65.9
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 5.7e-40 168.3 135 62.2
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 9.8e-40 167.5 133 63.9
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 9.8e-40 167.5 147 61.2
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 2.2e-39 166.4 128 64.1
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 2.2e-39 166.4 136 62.5
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.8e-39 166.0 119 71.4
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 3.7e-39 165.6 127 66.9
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 4.9e-39 165.2 182 51.6
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 6.3e-39 164.9 135 62.2
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 8.3e-39 164.5 152 57.9
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 1.4e-38 163.7 140 60.0
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.8e-38 163.3 125 64.0
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.8e-38 163.3 156 54.5
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 1.8e-38 163.3 205 45.9
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 2.4e-38 162.9 151 58.9
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 2.4e-38 162.9 162 53.1
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.4e-38 162.9 119 70.6
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 2.4e-38 162.9 133 63.2
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 3.1e-38 162.5 157 57.3
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 3.1e-38 162.5 129 66.7
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 4.1e-38 162.2 134 57.5
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 7.0e-38 161.4 167 49.7
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 9.1e-38 161.0 158 57.6
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.6e-37 160.2 150 55.3
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 1.6e-37 160.2 180 51.7
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 2.0e-37 159.8 139 61.2
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.7e-37 159.5 158 53.2
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.5e-37 159.1 142 56.3
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 3.5e-37 159.1 185 47.6
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 3.5e-37 159.1 128 61.7
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 5.9e-37 158.3 139 56.8
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 7.7e-37 157.9 130 63.1
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 1.7e-36 156.8 139 56.8
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 1.7e-36 156.8 163 50.3
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 2.3e-36 156.4 162 49.4
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 3.8e-36 155.6 134 56.0
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 5.0e-36 155.2 139 56.1
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 5.0e-36 155.2 150 54.0
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 6.6e-36 154.8 130 62.3
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.5e-35 153.7 142 54.2
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.5e-35 153.7 142 54.2
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.5e-35 153.7 142 54.2
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 1.9e-35 153.3 136 59.6
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 2.5e-35 152.9 146 52.1
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 7.2e-35 151.4 164 49.4
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 7.2e-35 151.4 127 59.1
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 9.5e-35 151.0 188 45.2
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 3.6e-34 149.1 146 54.8
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 4.7e-34 148.7 177 49.7
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 8.0e-34 147.9 135 53.3
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.4e-33 147.1 155 52.3
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 2.3e-33 146.4 132 54.5
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 3.4e-32 142.5 122 56.6
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 4.4e-32 142.1 142 50.7
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 7.5e-32 141.4 172 48.8
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 5.6e-27 125.2 178 43.8
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 1.0e-25 120.9 120 53.3
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 1.4e-25 120.6 141 46.8
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 8.9e-25 117.9 127 48.0
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 8.9e-25 117.9 127 48.0
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 4.4e-24 115.5 157 45.2
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 9.8e-24 114.4 126 46.8
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 3.7e-23 112.5 118 48.3
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 4.6e-21 105.5 119 49.6
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 8.6e-20 101.3 123 44.7
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 1.2e-16 90.9 127 39.4
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 8.3e-15 84.7 50 78.0
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 3.5e-13 79.3 49 71.4
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 6.6e-12 75.1 77 45.5
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 2.1e-10 70.1 155 29.7
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 8.4e-07 58.2 54 57.4
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 4.1e-06 55.8 140 25.0


User provided reference genes

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