Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000096g0090 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.4e-66 256.1 125 100.0
Nitab4.5_0001027g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.0e-26 123.6 70 78.6
Nitab4.5_0000103g0260 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.3e-21 105.9 68 69.1
Nitab4.5_0001783g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.9e-20 102.8 70 68.6
Nitab4.5_0004728g0120 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.4e-17 91.7 74 56.8
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-16 90.1 70 54.3
Nitab4.5_0000058g0330 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.3e-16 87.4 71 62.0
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-15 86.7 69 49.3
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-14 83.6 70 48.6
Nitab4.5_0000087g0070 Nicotiana tabacum HOM05D000003 ORTHO05D000006 3.0e-13 79.0 40 82.5
Nitab4.5_0001696g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-12 77.0 55 70.9
Nitab4.5_0003921g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.3e-12 75.1 70 44.3
Nitab4.5_0002328g0050 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.6e-12 74.7 65 46.2
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.6e-12 74.7 95 36.8
Nitab4.5_0000697g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-11 73.6 70 44.3
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-11 73.6 95 36.8
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-11 72.8 73 42.5
Nitab4.5_0011177g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.8e-11 72.4 113 37.2
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-11 72.0 70 44.3
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 6.2e-11 71.2 54 53.7
Nitab4.5_0028335g0010 Nicotiana tabacum HOM05D045504 ORTHO05D000006 1.1e-10 70.5 42 69.0
Nitab4.5_0001980g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-10 70.1 78 37.2
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.0e-10 68.6 65 41.5
Nitab4.5_0002977g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.2e-10 68.2 70 41.4
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.9e-10 67.4 119 34.5
Nitab4.5_0000539g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.2e-09 67.0 71 46.5
Nitab4.5_0027927g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.0e-09 66.2 55 52.7
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.4e-09 65.5 74 47.3
Nitab4.5_0002170g0110 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.4e-09 65.5 71 42.3
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.4e-09 65.1 65 41.5
Nitab4.5_0003601g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.4e-09 65.1 70 32.9
Nitab4.5_0005100g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.4e-09 65.1 52 50.0
Nitab4.5_0006768g0010 Nicotiana tabacum HOM05D000125 ORTHO05D013275 7.5e-09 64.3 53 47.2
Nitab4.5_0000350g0320 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.9e-09 63.9 64 42.2
Nitab4.5_0003178g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.3e-08 63.5 37 73.0
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-08 63.5 55 47.3
SHI24648 Sapria himalayana HOM05D000024 ORTHO05D000007 8.3e-08 60.8 82 36.6
Nitab4.5_0002590g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.1e-07 60.5 76 39.5
Nitab4.5_0004763g0010 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.1e-07 60.5 56 42.9
Nitab4.5_0007582g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.9e-07 59.7 67 35.8
SHI22070 Sapria himalayana HOM05D000024 ORTHO05D000006 1.9e-07 59.7 69 40.6
Nitab4.5_0005065g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.4e-07 59.3 117 22.2
SHI33731 Sapria himalayana HOM05D000024 ORTHO05D000006 2.4e-07 59.3 70 40.0
Nitab4.5_0001790g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-07 58.9 91 36.3
SHI20394 Sapria himalayana HOM05D000024 ORTHO05D000006 4.1e-07 58.5 70 40.0
SHI24657 Sapria himalayana HOM05D000024 ORTHO05D000007 4.1e-07 58.5 73 38.4
SHI29227 Sapria himalayana HOM05D000024 ORTHO05D000006 4.1e-07 58.5 70 37.1
Nitab4.5_0000261g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.4e-07 58.2 67 40.3
Nitab4.5_0004384g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 5.4e-07 58.2 54 44.4
Nitab4.5_0001158g0070 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.1e-07 57.8 95 31.6
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.2e-07 57.4 71 32.4
SHI48005 Sapria himalayana HOM05D000024 ORTHO05D000006 9.2e-07 57.4 53 41.5
SHI49579 Sapria himalayana HOM05D000024 ORTHO05D000006 9.2e-07 57.4 63 46.0
SHI16712 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.0 69 39.1
SHI53604 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-06 57.0 70 38.6
SHI48798 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-06 56.6 70 35.7
SHI49300 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-06 56.2 70 35.7
SHI08792 Sapria himalayana HOM05D000024 ORTHO05D000006 2.7e-06 55.8 70 37.1
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-06 55.5 101 31.7
SHI24646 Sapria himalayana HOM05D000024 ORTHO05D000006 3.5e-06 55.5 70 37.1
SHI16695 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-06 55.1 70 35.7
SHI19795 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-06 55.1 70 38.6
SHI22798 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-06 55.1 70 38.6
SHI34333 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-06 55.1 69 37.7
SHI36962 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-06 55.1 70 34.3
SHI40561 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-06 55.1 70 34.3
SHI49469 Sapria himalayana HOM05D000024 ORTHO05D000006 4.6e-06 55.1 70 35.7
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-06 54.7 92 34.8
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.0e-06 54.7 119 29.4
SHI24650 Sapria himalayana HOM05D000024 ORTHO05D000007 6.0e-06 54.7 70 34.3
SHI25746 Sapria himalayana HOM05D000024 ORTHO05D000006 6.0e-06 54.7 70 34.3
SHI34748 Sapria himalayana HOM05D000024 ORTHO05D000006 6.0e-06 54.7 67 32.8
Nitab4.5_0000527g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.8e-06 54.3 86 33.7
Nitab4.5_0007582g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.8e-06 54.3 66 36.4
SHI08790 Sapria himalayana HOM05D000024 ORTHO05D000006 7.8e-06 54.3 66 33.3
SHI26244 Sapria himalayana HOM05D000024 ORTHO05D000006 7.8e-06 54.3 70 35.7
SHI35495 Sapria himalayana HOM05D000024 ORTHO05D000006 7.8e-06 54.3 70 31.4
SHI35515 Sapria himalayana HOM05D000024 ORTHO05D000006 7.8e-06 54.3 70 34.3


User provided reference genes

Program Settings