Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000095g0140 Nicotiana tabacum HOM05D005692 ORTHO05D006953 9.0e-62 240.0 112 100.0
Nitab4.5_0003152g0130 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.0e-41 173.3 110 72.7
Nitab4.5_0009931g0010 Nicotiana tabacum HOM05D005692 ORTHO05D006953 1.0e-41 173.3 110 72.7
PGSC0003DMG400000281 Solanum tuberosum HOM05D005692 ORTHO05D006953 3.9e-41 171.4 110 71.8
Nitab4.5_0000540g0260 Nicotiana tabacum HOM05D005692 ORTHO05D006953 6.7e-41 170.6 109 72.5
Sopen12g003750 Solanum pennellii HOM05D005692 ORTHO05D006953 1.1e-40 169.9 110 70.9
CAN.G1241.20 Capsicum annuum HOM05D005692 ORTHO05D006953 2.5e-40 168.7 110 69.1
Solyc12g008810.2 Solanum lycopersicum HOM05D005692 ORTHO05D006953 2.5e-40 168.7 110 70.0
Peaxi162Scf00015g00716 Petunia axillaris HOM05D005692 ORTHO05D006953 3.3e-40 168.3 110 71.8
Peaxi162Scf00354g00223 Petunia axillaris HOM05D005692 ORTHO05D006953 1.1e-38 163.3 112 70.5
Sc14g0000750 Simmondsia chinensis HOM05D005692 ORTHO05D006953 5.3e-38 161.0 104 72.1
Migut.J00600 Erythranthe guttata HOM05D005692 ORTHO05D006953 9.1e-38 160.2 105 68.6
Migut.J01065 Erythranthe guttata HOM05D005692 ORTHO05D006953 9.1e-38 160.2 105 68.6
Hund14283 Selenicereus undatus HOM05D005692 ORTHO05D006953 9.1e-38 160.2 105 69.5
Gorai.005G027900 Gossypium raimondii HOM05D005692 ORTHO05D006953 3.4e-37 158.3 106 67.9
vmacro06285 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.7e-36 156.0 107 63.6
vmacro23428 Vaccinium macrocarpon HOM05D005692 ORTHO05D006953 1.7e-36 156.0 107 63.6
AUR62033506 Chenopodium quinoa HOM05D005692 ORTHO05D006953 2.2e-36 155.6 113 65.5
AUR62039390 Chenopodium quinoa HOM05D005692 ORTHO05D006953 3.8e-36 154.8 104 67.3
COL.COLO4_18212 Corchorus olitorius HOM05D005692 ORTHO05D006953 3.8e-36 154.8 110 63.6
Migut.H01159 Erythranthe guttata HOM05D005692 ORTHO05D006953 3.8e-36 154.8 105 67.6
Dinv36757 Davidia involucrata HOM05D005692 ORTHO05D006953 5.0e-36 154.5 105 67.6
Ah.09g223860 Amaranthus hybridus HOM05D005692 ORTHO05D006953 6.5e-36 154.1 104 67.3
Duzib151G0847 Durio zibethinus HOM05D005692 ORTHO05D006953 6.5e-36 154.1 105 67.6
Gohir.A02G019200 Gossypium hirsutum HOM05D005692 ORTHO05D006953 6.5e-36 154.1 105 67.6
Gohir.D02G022500 Gossypium hirsutum HOM05D005692 ORTHO05D006953 6.5e-36 154.1 105 67.6
EL10Ac2g04637 Beta vulgaris HOM05D005692 ORTHO05D006953 8.5e-36 153.7 104 66.3
Cc06_g11300 Coffea canephora HOM05D005692 ORTHO05D006953 8.5e-36 153.7 106 67.0
Oeu039606.1 Olea europaea HOM05D005692 ORTHO05D006953 1.1e-35 153.3 104 68.3
Migut.H00760 Erythranthe guttata HOM05D005692 ORTHO05D006953 1.4e-35 152.9 104 66.3
Glyma.18G151700 Glycine max HOM05D005692 ORTHO05D006953 1.9e-35 152.5 106 66.0
MELO3C015461.2 Cucumis melo HOM05D005692 ORTHO05D006953 2.5e-35 152.1 104 65.4
Ca_07409_v3 Cicer arietinum L. HOM05D005692 ORTHO05D006953 3.2e-35 151.8 104 67.3
Glyma.08G343600 Glycine max HOM05D005692 ORTHO05D006953 3.2e-35 151.8 106 66.0
DCAR_011984 Daucus carota HOM05D005692 ORTHO05D006953 4.2e-35 151.4 104 64.4
CsaV3_1G040340 Cucumis sativus L. HOM05D005692 ORTHO05D006953 5.5e-35 151.0 104 65.4
Thecc.09G090700 Theobroma cacao HOM05D005692 ORTHO05D006953 5.5e-35 151.0 105 64.8
ClCG03G015670 Citrullus lanatus HOM05D005692 ORTHO05D006953 7.2e-35 150.6 104 66.3
MD02G1077000 Malus domestica HOM05D005692 ORTHO05D006953 9.4e-35 150.2 106 66.0
Nn6g35447 Nelumbo nucifera HOM05D005692 ORTHO05D006953 9.4e-35 150.2 105 67.6
Potri.012G001800 Populus trichocarpa HOM05D005692 ORTHO05D006953 9.4e-35 150.2 101 65.3
Rhsim03G0233100 Rhododendron simsii HOM05D005692 ORTHO05D006953 9.4e-35 150.2 107 62.6
Sabra12G0019500 Salix brachista HOM05D005692 ORTHO05D006953 9.4e-35 150.2 101 65.3
Sabra12G0019700 Salix brachista HOM05D005692 ORTHO05D006953 9.4e-35 150.2 101 65.3
Ah.10g037300 Amaranthus hybridus HOM05D005692 ORTHO05D006953 1.2e-34 149.8 104 66.3
Nn8g38892 Nelumbo nucifera HOM05D005692 ORTHO05D006953 1.2e-34 149.8 105 66.7
Psat6g162800 Pisum sativum HOM05D005692 ORTHO05D006953 1.2e-34 149.8 104 65.4
PGR102G3100 Punica granatum HOM05D005692 ORTHO05D006953 1.6e-34 149.4 105 65.7
VMungo1383G2743 Vigna mungo HOM05D005692 ORTHO05D006953 1.6e-34 149.4 115 63.5
Nitab4.5_0003079g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 2.1e-34 149.1 98 70.4
Psat6g183720 Pisum sativum HOM05D005692 ORTHO05D006953 2.1e-34 149.1 104 65.4
Phvul.008G136000 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.6e-34 148.3 104 65.4
Phvul.008G136200 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 3.6e-34 148.3 104 65.4
Medtr7g051450 Medicago truncatula HOM05D005692 ORTHO05D006953 4.7e-34 147.9 101 66.3
arahy.Tifrunner.gnm1.ann1.JM0M9B Arachis hypogaea HOM05D005692 ORTHO05D006953 6.1e-34 147.5 104 64.4
arahy.Tifrunner.gnm1.ann1.VY1HWT Arachis hypogaea HOM05D005692 ORTHO05D006953 6.1e-34 147.5 104 64.4
Cpa.g.sc20.158 Carica papaya HOM05D005692 ORTHO05D006953 6.1e-34 147.5 105 65.7
Phvul.005G056600 Phaseolus vulgaris HOM05D005692 ORTHO05D006953 6.1e-34 147.5 104 64.4
Lalb_Chr03g0041061 Lupinus albus HOM05D005692 ORTHO05D006953 7.9e-34 147.1 106 62.3
Ciclev10010392m.g Citrus clementina HOM05D005692 ORTHO05D006953 1.0e-33 146.7 108 61.1
MD15G1205700 Malus domestica HOM05D005692 ORTHO05D006953 1.0e-33 146.7 106 65.1
Lj1g0023726 Lotus japonicus HOM05D005692 ORTHO05D006953 1.4e-33 146.4 104 65.4
Manes.03G032800 Manihot esculenta HOM05D005692 ORTHO05D006953 1.4e-33 146.4 105 61.9
CiPaw.03G217300 Carya illinoinensis HOM05D005692 ORTHO05D006953 1.8e-33 146.0 105 61.9
SGA_v2.0_scaffold852G53671 Striga asiatica HOM05D005692 ORTHO05D006953 1.8e-33 146.0 104 63.5
CSS0005546 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.3e-33 145.6 105 62.9
CSS0025569 Camellia sinensis var. sinensis HOM05D005692 ORTHO05D006953 2.3e-33 145.6 105 62.9
Medtr7g021900 Medicago truncatula HOM05D005692 ORTHO05D006953 2.3e-33 145.6 101 65.3
Prupe.7G211400 Prunus persica HOM05D005692 ORTHO05D006953 5.1e-33 144.4 104 61.5
Cfa003097 Carpinus fangiana HOM05D005692 ORTHO05D006953 6.7e-33 144.1 102 61.8
ECA234G3968 Erigeron canadensis HOM05D005692 ORTHO05D006953 6.7e-33 144.1 105 61.0
Psat6g183640 Pisum sativum HOM05D005692 ORTHO05D006953 6.7e-33 144.1 104 63.5
HanXRQChr10g0319271 Helianthus annuus HOM05D005692 ORTHO05D006953 1.1e-32 143.3 105 61.0
Sed0014309 Sechium edule HOM05D005692 ORTHO05D006953 1.1e-32 143.3 103 63.1
RcHm_v2.0_Chr2g0093151 Rosa chinensis HOM05D005692 ORTHO05D006953 1.5e-32 142.9 104 62.5
TAR626G0225 Trochodendron aralioides HOM05D005692 ORTHO05D006953 2.0e-32 142.5 105 63.8
TWI34G0948 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 2.6e-32 142.1 102 63.7
SGA_v2.0_scaffold33G13431 Striga asiatica HOM05D005692 ORTHO05D006953 3.3e-32 141.7 104 62.5
Atru.BG.21.p Acer truncatum HOM05D005692 ORTHO05D006953 4.4e-32 141.4 99 63.6
SGA_v2.0_scaffold62G21600 Striga asiatica HOM05D005692 ORTHO05D006953 4.4e-32 141.4 104 62.5
FvH4_1g07240 Fragaria vesca HOM05D005692 ORTHO05D006953 5.7e-32 141.0 104 61.5
FAN26G0193 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.7e-32 141.0 104 61.5
Duzib187G1084 Durio zibethinus HOM05D005692 ORTHO05D006953 1.3e-31 139.8 105 60.0
Psat6g183440 Pisum sativum HOM05D005692 ORTHO05D006953 2.2e-31 139.0 104 62.5
HPP92_009139 Vanilla planifolia HOM05D005692 ORTHO05D006953 2.8e-31 138.7 108 58.3
Atru.BG.266.p Acer truncatum HOM05D005692 ORTHO05D006953 4.8e-31 137.9 99 62.6
CANSAT78G0210 Cannabis sativa HOM05D005692 ORTHO05D006953 4.8e-31 137.9 101 59.4
HanXRQChr12g0354791 Helianthus annuus HOM05D005692 ORTHO05D006953 4.8e-31 137.9 105 58.1
MBI13_g44212_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 4.8e-31 137.9 105 59.0
MBI14_g41836_MAGBIO Magnolia biondii HOM05D005692 ORTHO05D006953 4.8e-31 137.9 105 59.0
Eucgr.C03889 Eucalyptus grandis HOM05D005692 ORTHO05D006953 6.3e-31 137.5 106 60.4
unitig_748.g8121 Utricularia gibba HOM05D005692 ORTHO05D006953 8.2e-31 137.1 104 60.6
FAN19G2784 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.1e-30 136.7 104 58.7
THA.LOC104801884 Tarenaya hassleriana HOM05D005692 ORTHO05D006953 1.4e-30 136.3 102 60.8
Duzib187G0878 Durio zibethinus HOM05D005692 ORTHO05D006953 2.4e-30 135.6 105 61.0
PSO210G0626 Papaver somniferum HOM05D005692 ORTHO05D006953 2.4e-30 135.6 105 60.0
PSO210G2337 Papaver somniferum HOM05D005692 ORTHO05D006953 2.4e-30 135.6 105 60.0
FAN23G0510 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.3e-30 134.4 102 59.8
FAN26G1568 Fragaria x ananassa HOM05D005692 ORTHO05D006953 5.3e-30 134.4 102 59.8
Lsat_1_v5_gn_5_145440 Lactuca sativa HOM05D005692 ORTHO05D006953 5.3e-30 134.4 105 57.1
FAN19G0937 Fragaria x ananassa HOM05D005692 ORTHO05D006953 1.2e-29 133.3 106 58.5
GSVIVG01015215001 Vitis vinifera HOM05D005692 ORTHO05D006953 2.6e-29 132.1 105 60.0
FvH4_1g24820 Fragaria vesca HOM05D005692 ORTHO05D006953 4.5e-29 131.3 104 57.7
Actinidia29885 Actinidia chinensis HOM05D003753 ORTHO05D005081 1.7e-28 129.4 100 60.0
Nitab4.5_0004795g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 5.0e-28 127.9 91 71.4
Nitab4.5_0008958g0020 Nicotiana tabacum HOM05D005692 ORTHO05D006953 6.5e-28 127.5 89 73.0
Aa31LG2G20910 Aethionema arabicum HOM05D005692 ORTHO05D006953 8.5e-28 127.1 106 53.8
BcaC09g51744 Brassica carinata HOM05D005692 ORTHO05D006953 8.5e-28 127.1 98 58.2
Aqoxy4G03142 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 1.1e-27 126.7 105 57.1
AL7G22650 Arabidopsis lyrata HOM05D005692 ORTHO05D006953 1.1e-27 126.7 98 58.2
AT4G29660 Arabidopsis thaliana HOM05D005692 ORTHO05D006953 1.1e-27 126.7 98 58.2
Carub.0007s1086 Capsella rubella HOM05D005692 ORTHO05D006953 1.1e-27 126.7 98 58.2
CARHR237500 Cardamine hirsuta HOM05D005692 ORTHO05D006953 1.1e-27 126.7 98 58.2
Thhalv10026646m.g Eutrema salsugineum HOM05D005692 ORTHO05D006953 1.4e-27 126.3 98 58.2
TWI32G0831 Tripterygium wilfordii HOM05D005692 ORTHO05D006953 1.4e-27 126.3 102 58.8
BcaC09g52211 Brassica carinata HOM05D005692 ORTHO05D006953 1.9e-27 125.9 98 57.1
A01p08470 Brassica napus HOM05D005692 ORTHO05D006953 1.9e-27 125.9 98 57.1
C01p09830 Brassica napus HOM05D005692 ORTHO05D006953 1.9e-27 125.9 98 57.1
BolC1t00945H Brassica oleracea HOM05D005692 ORTHO05D006953 1.9e-27 125.9 98 57.1
BraA01t00794Z Brassica rapa HOM05D005692 ORTHO05D006953 1.9e-27 125.9 98 57.1
Os05g0540200 Oryza sativa ssp. japonica HOM05D005692 ORTHO05D006953 1.9e-27 125.9 104 56.7
Sp3g29900 Schrenkiella parvula HOM05D005692 ORTHO05D006953 1.9e-27 125.9 98 58.2
Sp7g27450 Schrenkiella parvula HOM05D005692 ORTHO05D006953 3.2e-27 125.2 98 58.2
SHI00379 Sapria himalayana HOM05D005692 ORTHO05D006953 1.2e-26 123.2 89 60.7
ATR0602G199 Amborella trichopoda HOM05D005692 ORTHO05D006953 3.6e-26 121.7 105 55.2
Peaxi162Scf00498g00124 Petunia axillaris HOM05D005692 ORTHO05D006953 3.6e-26 121.7 86 68.6
Aqoxy1G00378 Aquilegia oxysepala HOM05D005692 ORTHO05D006953 6.3e-23 110.9 102 51.0
SGA_v2.0_scaffold33G13433 Striga asiatica HOM05D000524 ORTHO05D000381 1.2e-21 106.7 61 77.0
TPR.G24304 Trifolium pratense HOM05D005692 ORTHO05D006953 1.2e-21 106.7 61 77.0
Psat0s10921g0080 Pisum sativum HOM05D005692 ORTHO05D006953 4.5e-21 104.8 61 75.4
CDE06G0459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 8.5e-20 100.5 85 54.1
FAN19G3189 Fragaria x ananassa HOM05D005692 ORTHO05D006953 9.4e-19 97.1 61 68.9
SHI21206 Sapria himalayana HOM05D005692 ORTHO05D006953 6.1e-18 94.4 73 56.2
CDE06G1459 Ceratophyllum demersum HOM05D005692 ORTHO05D006953 1.8e-14 82.8 81 50.6
Zm00001eb294300 Zea mays HOM05D005692 ORTHO05D006953 6.5e-12 74.3 57 59.6
Mapoly0063s0096 Marchantia polymorpha HOM05D005692 ORTHO05D006953 1.8e-09 66.2 86 38.4
CBR_g36562 Chara braunii HOM05D005692 ORTHO05D006953 1.2e-08 63.5 81 39.5
Pp3c13_20310 Physcomitrium patens HOM05D005692 ORTHO05D006953 2.2e-07 59.3 64 39.1


User provided reference genes

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