Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000094g0210 Nicotiana tabacum HOM05D004612 ORTHO05D004940 9.9e-118 426.8 213 100.0
Nitab4.5_0010110g0020 Nicotiana tabacum HOM05D004612 ORTHO05D004940 1.7e-32 143.7 125 68.0
CAN.G718.1 Capsicum annuum HOM05D004612 ORTHO05D004940 5.6e-28 128.6 124 60.5
Sopen05g028090 Solanum pennellii HOM05D004612 ORTHO05D004940 5.2e-26 122.1 124 56.5
Solyc05g048770.3 Solanum lycopersicum HOM05D004612 ORTHO05D004940 2.6e-25 119.8 210 40.5
Nitab4.5_0010827g0010 Nicotiana tabacum HOM05D004612 ORTHO05D004940 1.4e-23 114.0 118 57.6
Nitab4.5_0002608g0040 Nicotiana tabacum HOM05D004612 ORTHO05D004940 1.3e-21 107.5 118 55.1
Oeu014678.1 Olea europaea HOM05D004612 ORTHO05D004940 1.2e-17 94.4 121 47.9
Cfa003958 Carpinus fangiana HOM05D004612 ORTHO05D004940 4.4e-17 92.4 124 47.6
Haze_15464 Corylus avellana HOM05D004612 ORTHO05D004940 2.2e-16 90.1 118 47.5
TAR629G0951 Trochodendron aralioides HOM05D004612 ORTHO05D004940 8.3e-16 88.2 123 44.7
QL08p049561 Quercus lobata HOM05D004612 ORTHO05D004940 7.0e-15 85.1 118 44.9
CsaV3_3G009110 Cucumis sativus L. HOM05D004612 ORTHO05D004940 3.5e-14 82.8 114 45.6
Glyma.03G096900 Glycine max HOM05D004612 ORTHO05D004940 4.6e-14 82.4 114 43.0
Ciclev10024326m.g Citrus clementina HOM05D004612 ORTHO05D004940 7.8e-14 81.6 117 42.7
Hma1.2p1_0033F.1_g020400 Hydrangea macrophylla HOM05D004612 ORTHO05D004940 1.0e-13 81.3 114 46.5
PGR031G1383 Punica granatum HOM05D004612 ORTHO05D004940 1.7e-13 80.5 119 44.5
Cpa.g.sc20.34 Carica papaya HOM05D004612 ORTHO05D004940 2.3e-13 80.1 114 43.0
MELO3C006131.2 Cucumis melo HOM05D004612 ORTHO05D004940 2.3e-13 80.1 114 44.7
Ca_27541_v3 Cicer arietinum L. HOM05D004612 ORTHO05D004940 3.9e-13 79.3 120 41.7
Prupe.2G162500 Prunus persica HOM05D004612 ORTHO05D004940 3.9e-13 79.3 118 43.2
Aqoxy46s002 Aquilegia oxysepala HOM05D004612 ORTHO05D004940 5.0e-13 79.0 123 40.7
ClCG05G001720 Citrullus lanatus HOM05D004612 ORTHO05D004940 5.0e-13 79.0 114 43.9
RcHm_v2.0_Chr1g0353691 Rosa chinensis HOM05D004612 ORTHO05D004940 5.0e-13 79.0 118 42.4
SalBow3G1907 Salvia bowleyana HOM05D004612 ORTHO05D004940 5.0e-13 79.0 209 33.5
Peaxi162Scf00246g01122 Petunia axillaris HOM05D004612 ORTHO05D004940 6.6e-13 78.6 67 70.1
MD07G1141600 Malus domestica HOM05D004612 ORTHO05D004940 8.6e-13 78.2 118 44.1
Manes.12G065000 Manihot esculenta HOM05D004612 ORTHO05D004940 8.6e-13 78.2 123 42.3
Actinidia09998 Actinidia chinensis HOM05D004612 ORTHO05D004940 1.1e-12 77.8 117 41.0
Eucgr.D02267 Eucalyptus grandis HOM05D004612 ORTHO05D004940 1.1e-12 77.8 120 44.2
FvH4_7g13631 Fragaria vesca HOM05D004612 ORTHO05D004940 1.1e-12 77.8 119 43.7
FAN03G2220 Fragaria x ananassa HOM05D004612 ORTHO05D004940 1.1e-12 77.8 119 43.7
Sed0015875 Sechium edule HOM05D004612 ORTHO05D004940 1.1e-12 77.8 114 43.0
SGA_v2.0_scaffold95G28856 Striga asiatica HOM05D004612 ORTHO05D004940 1.1e-12 77.8 121 37.2
TWI59G1187 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 1.1e-12 77.8 126 40.5
vmacro22088 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.1e-12 77.8 205 31.2
COL.COLO4_12673 Corchorus olitorius HOM05D004612 ORTHO05D004940 1.5e-12 77.4 114 43.0
CSS0006325 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.9e-12 77.0 124 40.3
CSS0014629 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.9e-12 77.0 124 40.3
CSS0046042 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 1.9e-12 77.0 124 40.3
FAN06G2470 Fragaria x ananassa HOM05D004612 ORTHO05D004940 1.9e-12 77.0 117 43.6
FAN06G3441 Fragaria x ananassa HOM05D004612 ORTHO05D004940 1.9e-12 77.0 117 43.6
FAN10G2510 Fragaria x ananassa HOM05D004612 ORTHO05D004940 1.9e-12 77.0 117 43.6
Rhsim07G0018100 Rhododendron simsii HOM05D004612 ORTHO05D004940 2.5e-12 76.6 125 39.2
PSO063G2700 Papaver somniferum HOM05D004612 ORTHO05D004940 3.3e-12 76.3 126 40.5
HanXRQChr16g0523031 Helianthus annuus HOM05D004612 ORTHO05D004940 4.3e-12 75.9 118 39.8
GSVIVG01026844001 Vitis vinifera HOM05D004612 ORTHO05D004940 4.3e-12 75.9 118 42.4
Dinv32447 Davidia involucrata HOM05D004612 ORTHO05D004940 5.6e-12 75.5 72 56.9
Lj3g0020312 Lotus japonicus HOM05D004612 ORTHO05D004940 5.6e-12 75.5 120 39.2
Sc07g0008070 Simmondsia chinensis HOM05D004612 ORTHO05D004940 5.6e-12 75.5 126 40.5
TWI59G0622 Tripterygium wilfordii HOM05D004612 ORTHO05D004940 1.2e-11 74.3 153 37.3
vmacro13313 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 1.2e-11 74.3 147 36.1
MD01G1053600 Malus domestica HOM05D004612 ORTHO05D004940 1.6e-11 73.9 118 41.5
Oeu004526.1 Olea europaea HOM05D004612 ORTHO05D004940 1.6e-11 73.9 100 45.0
Potri.014G080600 Populus trichocarpa HOM05D004612 ORTHO05D004940 1.6e-11 73.9 106 45.3
arahy.Tifrunner.gnm1.ann1.4I97V1 Arachis hypogaea HOM05D004612 ORTHO05D004940 2.1e-11 73.6 120 39.2
Medtr8g031580 Medicago truncatula HOM05D004612 ORTHO05D004940 2.1e-11 73.6 120 40.0
PSO782G5368 Papaver somniferum HOM05D004612 ORTHO05D004940 2.1e-11 73.6 126 39.7
Migut.B01722 Erythranthe guttata HOM05D004612 ORTHO05D004940 2.8e-11 73.2 202 33.2
VMungo1127G0482 Vigna mungo HOM05D004612 ORTHO05D004940 2.8e-11 73.2 114 39.5
Nn3g17842 Nelumbo nucifera HOM05D004612 ORTHO05D004940 3.6e-11 72.8 107 41.1
Gohir.A11G082600 Gossypium hirsutum HOM05D004612 ORTHO05D004940 4.7e-11 72.4 120 40.0
Phvul.011G160800 Phaseolus vulgaris HOM05D004612 ORTHO05D004940 4.7e-11 72.4 114 39.5
Psat4g153800 Pisum sativum HOM05D004612 ORTHO05D004940 4.7e-11 72.4 120 41.7
MSTRG.17249 Avicennia marina HOM05D004612 ORTHO05D004940 6.2e-11 72.0 122 36.9
Atru.chr5.446 Acer truncatum HOM05D004612 ORTHO05D004940 8.1e-11 71.6 133 39.1
Sabra14G0058500 Salix brachista HOM05D004612 ORTHO05D004940 1.1e-10 71.2 106 44.3
Thecc.01G363500 Theobroma cacao HOM05D004612 ORTHO05D004940 1.1e-10 71.2 121 39.7
Gohir.D11G091300 Gossypium hirsutum HOM05D004612 ORTHO05D004940 1.8e-10 70.5 120 39.2
Gorai.007G097300 Gossypium raimondii HOM05D004612 ORTHO05D004940 1.8e-10 70.5 120 39.2
TPR.G4369 Trifolium pratense HOM05D004612 ORTHO05D004940 1.8e-10 70.5 118 42.4
AUR62033332 Chenopodium quinoa HOM05D004612 ORTHO05D004940 2.3e-10 70.1 153 34.6
Lalb_Chr10g0097231 Lupinus albus HOM05D004612 ORTHO05D004940 2.3e-10 70.1 120 39.2
Duzib133G0359 Durio zibethinus HOM05D004612 ORTHO05D004940 3.1e-10 69.7 103 44.7
Lsat_1_v5_gn_4_36480 Lactuca sativa HOM05D004612 ORTHO05D004940 3.1e-10 69.7 191 33.5
AT4G00590 Arabidopsis thaliana HOM05D004612 ORTHO05D004940 5.2e-10 68.9 154 31.8
Cc02_g37600 Coffea canephora HOM05D004612 ORTHO05D004940 6.8e-10 68.6 117 36.8
MBI17_g08173_MAGBIO Magnolia biondii HOM05D004612 ORTHO05D004940 8.9e-10 68.2 118 35.6
Carub.0006s3663 Capsella rubella HOM05D004612 ORTHO05D004940 1.2e-09 67.8 153 30.7
AL6G52840 Arabidopsis lyrata HOM05D004612 ORTHO05D004940 2.0e-09 67.0 153 30.1
CiPaw.02G028400 Carya illinoinensis HOM05D004612 ORTHO05D004940 3.4e-09 66.2 74 52.7
THA.LOC104801450 Tarenaya hassleriana HOM05D004612 ORTHO05D004940 4.4e-09 65.9 199 26.6
BcaB01g02261 Brassica carinata HOM05D004612 ORTHO05D004940 5.8e-09 65.5 208 30.3
Ah.05g176430 Amaranthus hybridus HOM05D004612 ORTHO05D004940 9.8e-09 64.7 122 39.3
DCAR_008600 Daucus carota HOM05D004612 ORTHO05D004940 1.3e-08 64.3 107 39.3
Thhalv10028700m.g Eutrema salsugineum HOM05D004612 ORTHO05D004940 1.3e-08 64.3 154 30.5
Hund16942 Selenicereus undatus HOM05D004612 ORTHO05D004940 1.3e-08 64.3 109 39.4
EL10Ac1g00526 Beta vulgaris HOM05D004612 ORTHO05D004940 1.7e-08 63.9 65 56.9
unitig_0.g1278 Utricularia gibba HOM05D004612 ORTHO05D004940 1.7e-08 63.9 208 30.8
Prupe.8G034000 Prunus persica HOM05D004612 ORTHO05D004940 2.2e-08 63.5 61 55.7
AUR62004317 Chenopodium quinoa HOM05D004612 ORTHO05D004940 2.9e-08 63.2 104 39.4
Aa31LG5G400 Aethionema arabicum HOM05D004612 ORTHO05D004940 4.9e-08 62.4 163 28.8
CARHR248760 Cardamine hirsuta HOM05D004612 ORTHO05D004940 4.9e-08 62.4 149 32.9
FAN01G1921 Fragaria x ananassa HOM05D000092 ORTHO05D004940 4.9e-08 62.4 67 53.7
A09p00400 Brassica napus HOM05D004612 ORTHO05D004940 1.1e-07 61.2 206 29.6
Sp6g00630 Schrenkiella parvula HOM05D004612 ORTHO05D004940 1.1e-07 61.2 103 35.9
HPP92_021103 Vanilla planifolia HOM05D004612 ORTHO05D004940 1.1e-07 61.2 156 32.1
BraA09t35721Z Brassica rapa HOM05D004612 ORTHO05D004940 1.4e-07 60.8 205 27.8
BolC9t52984H Brassica oleracea HOM05D004612 ORTHO05D004940 3.2e-07 59.7 153 28.8
BcaC04g24158 Brassica carinata HOM05D004612 ORTHO05D004940 4.1e-07 59.3 103 35.9
C09p00500 Brassica napus HOM05D004612 ORTHO05D004940 4.1e-07 59.3 103 35.9
ECA234G1569 Erigeron canadensis HOM05D004612 ORTHO05D004940 4.1e-07 59.3 117 34.2
Lj9C580G6 Lonicera japonica HOM05D004612 ORTHO05D004940 4.1e-07 59.3 52 57.7
vmacro13311 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 4.1e-07 59.3 80 43.8
vmacro00164 Vaccinium macrocarpon HOM05D004612 ORTHO05D004940 5.4e-07 58.9 60 53.3
CSS0015544 Camellia sinensis var. sinensis HOM05D004612 ORTHO05D004940 2.1e-06 57.0 90 37.8
Peaxi162Scf00397g00041 Petunia axillaris HOM05D004612 ORTHO05D004940 2.7e-06 56.6 38 81.6
ATR0680G383 Amborella trichopoda HOM05D004612 ORTHO05D004940 3.5e-06 56.2 50 56.0
Zm00001eb433970 Zea mays HOM05D004612 ORTHO05D004940 4.6e-06 55.8 61 47.5


User provided reference genes

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