Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000092g0110 Nicotiana tabacum HOM05D003380 ORTHO05D284993 6.1e-52 207.2 105 100.0
Nitab4.5_0000749g0120 Nicotiana tabacum HOM05D003380 ORTHO05D004232 9.4e-29 130.2 90 77.8
THA.LOC104819924 Tarenaya hassleriana HOM05D003380 ORTHO05D004232 1.0e-14 83.6 98 52.0
Cpa.g.sc148.3 Carica papaya HOM05D003380 ORTHO05D004232 1.3e-14 83.2 98 53.1
Manes.03G001100 Manihot esculenta HOM05D003380 ORTHO05D004232 1.3e-14 83.2 96 55.2
HPP92_004718 Vanilla planifolia HOM05D003380 ORTHO05D004232 1.3e-14 83.2 101 50.5
ClCG08G012530 Citrullus lanatus HOM05D003380 ORTHO05D004232 1.7e-14 82.8 98 53.1
MELO3C011172.2 Cucumis melo HOM05D003380 ORTHO05D004232 1.7e-14 82.8 98 53.1
Sed0024231 Sechium edule HOM05D003380 ORTHO05D004232 1.7e-14 82.8 98 53.1
Ah.09g234230 Amaranthus hybridus HOM05D003380 ORTHO05D004232 2.2e-14 82.4 96 55.2
CSS0000176 Camellia sinensis var. sinensis HOM05D003380 ORTHO05D004232 2.2e-14 82.4 96 54.2
PSO170G5091 Papaver somniferum HOM05D003380 ORTHO05D004232 2.2e-14 82.4 98 51.0
PSO210G2204 Papaver somniferum HOM05D003380 ORTHO05D004232 2.2e-14 82.4 98 51.0
Cfa013309 Carpinus fangiana HOM05D003380 ORTHO05D004232 2.9e-14 82.0 98 52.0
Haze_21791 Corylus avellana HOM05D003380 ORTHO05D004232 2.9e-14 82.0 98 52.0
Sed0022704 Sechium edule HOM05D003380 ORTHO05D004232 2.9e-14 82.0 96 54.2
Sc06g0001250 Simmondsia chinensis HOM05D003380 ORTHO05D004232 2.9e-14 82.0 103 51.5
Haze_23534 Corylus avellana HOM05D004783 ORTHO05D005581 3.8e-14 81.6 108 50.0
FvH4_2g36480 Fragaria vesca HOM05D003380 ORTHO05D004232 3.8e-14 81.6 97 51.5
FAN20G0682 Fragaria x ananassa HOM05D003380 ORTHO05D004232 3.8e-14 81.6 97 51.5
Gohir.D13G185700 Gossypium hirsutum HOM05D003380 ORTHO05D004232 3.8e-14 81.6 98 52.0
Gorai.013G211700 Gossypium raimondii HOM05D003380 ORTHO05D004232 3.8e-14 81.6 98 52.0
RcHm_v2.0_Chr6g0305401 Rosa chinensis HOM05D003380 ORTHO05D004232 3.8e-14 81.6 97 51.5
Thecc.09G002600 Theobroma cacao HOM05D003380 ORTHO05D004232 3.8e-14 81.6 98 52.0
FAN15G0754 Fragaria x ananassa HOM05D003380 ORTHO05D004232 5.0e-14 81.3 97 51.5
arahy.Tifrunner.gnm1.ann1.21Q806 Arachis hypogaea HOM05D003380 ORTHO05D004232 6.5e-14 80.9 97 52.6
arahy.Tifrunner.gnm1.ann1.AGKE2S Arachis hypogaea HOM05D003380 ORTHO05D004232 6.5e-14 80.9 97 52.6
CiPaw.07G209900 Carya illinoinensis HOM05D003380 ORTHO05D004232 6.5e-14 80.9 104 51.9
COL.COLO4_18628 Corchorus olitorius HOM05D003380 ORTHO05D004232 6.5e-14 80.9 95 52.6
Aa31LG2G19070 Aethionema arabicum HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
AL7G20780 Arabidopsis lyrata HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BcaB03g12688 Brassica carinata HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BcaC09g51907 Brassica carinata HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BcaNung05317 Brassica carinata HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
A01p07000 Brassica napus HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
A03p60610 Brassica napus HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
A08p18700 Brassica napus HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
C01p07730 Brassica napus HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BolC1t00756H Brassica oleracea HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BolC3t21119H Brassica oleracea HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BolC7t46306H Brassica oleracea HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BraA01t00651Z Brassica rapa HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BraA03t15102Z Brassica rapa HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
BraA08t33831Z Brassica rapa HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
Carub.0007s0926 Capsella rubella HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
CAN.G228.7 Capsicum annuum HOM05D003380 ORTHO05D004232 8.5e-14 80.5 100 50.0
CARHR239170 Cardamine hirsuta HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
Duzib150G0262 Durio zibethinus HOM05D003380 ORTHO05D004232 8.5e-14 80.5 91 54.9
Duzib168G0804 Durio zibethinus HOM05D003380 ORTHO05D004232 8.5e-14 80.5 91 54.9
Thhalv10026126m.g Eutrema salsugineum HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
Gohir.A13G181700 Gossypium hirsutum HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 51.0
Nn3g19887 Nelumbo nucifera HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 51.0
Sp7g29150 Schrenkiella parvula HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
THA.LOC104803586 Tarenaya hassleriana HOM05D003380 ORTHO05D004232 8.5e-14 80.5 98 50.0
TAR383G0138 Trochodendron aralioides HOM05D003380 ORTHO05D004232 8.5e-14 80.5 96 53.1
TAR383G1016 Trochodendron aralioides HOM05D003380 ORTHO05D004232 8.5e-14 80.5 96 53.1
BcaC01g01103 Brassica carinata HOM05D003380 ORTHO05D004232 1.1e-13 80.1 98 50.0
C03p88100 Brassica napus HOM05D003380 ORTHO05D004232 1.1e-13 80.1 98 50.0
CsaV3_2G031230 Cucumis sativus L. HOM05D003380 ORTHO05D004232 1.1e-13 80.1 98 51.0
Glyma.04G077400 Glycine max HOM05D003380 ORTHO05D004232 1.1e-13 80.1 97 52.6
Glyma.06G078500 Glycine max HOM05D003380 ORTHO05D004232 1.1e-13 80.1 97 52.6
MD13G1234400 Malus domestica HOM05D003380 ORTHO05D004232 1.1e-13 80.1 95 51.6
MD16G1239000 Malus domestica HOM05D003380 ORTHO05D004232 1.1e-13 80.1 95 51.6
Prupe.1G456200 Prunus persica HOM05D003380 ORTHO05D004232 1.1e-13 80.1 97 51.5
VMungo1309G0072 Vigna mungo HOM05D003380 ORTHO05D004232 1.1e-13 80.1 97 52.6
Cfa010143 Carpinus fangiana HOM05D003380 ORTHO05D004232 1.5e-13 79.7 94 53.2
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 1.5e-13 79.7 108 46.3
Dinv26471 Davidia involucrata HOM05D003380 ORTHO05D004232 1.5e-13 79.7 91 54.9
Psat5g024560 Pisum sativum HOM05D003380 ORTHO05D004232 1.5e-13 79.7 97 51.5
Hund19388 Selenicereus undatus HOM05D003380 ORTHO05D004232 1.5e-13 79.7 96 53.1
SGA_v2.0_scaffold450G51802 Striga asiatica HOM05D003380 ORTHO05D004232 1.5e-13 79.7 91 54.9
vmacro15777 Vaccinium macrocarpon HOM05D003380 ORTHO05D004232 1.5e-13 79.7 91 52.7
MSTRG.10467 Avicennia marina HOM05D003380 ORTHO05D004232 1.9e-13 79.3 91 53.8
CAN.G106.10 Capsicum annuum HOM05D003380 ORTHO05D004232 1.9e-13 79.3 91 54.9
CiPaw.08G021300 Carya illinoinensis HOM05D003380 ORTHO05D004232 1.9e-13 79.3 95 52.6
HanXRQChr03g0067311 Helianthus annuus HOM05D003380 ORTHO05D004232 1.9e-13 79.3 91 51.6
Hma1.2p1_0443F.1_g154000 Hydrangea macrophylla HOM05D003380 ORTHO05D004232 1.9e-13 79.3 93 52.7
Lj4A319G22 Lonicera japonica HOM05D003380 ORTHO05D004232 1.9e-13 79.3 91 54.9
Lj1g0002632 Lotus japonicus HOM05D003380 ORTHO05D004232 1.9e-13 79.3 95 52.6
Lalb_Chr08g0243471 Lupinus albus HOM05D003380 ORTHO05D004232 1.9e-13 79.3 98 51.0
Lalb_Chr23g0269261 Lupinus albus HOM05D003380 ORTHO05D004232 1.9e-13 79.3 98 51.0
Medtr3g109210 Medicago truncatula HOM05D003380 ORTHO05D004232 1.9e-13 79.3 97 51.5
Nitab4.5_0007423g0010 Nicotiana tabacum HOM05D003380 ORTHO05D004232 1.9e-13 79.3 91 54.9
Peaxi162Scf00320g00122 Petunia axillaris HOM05D003380 ORTHO05D004232 1.9e-13 79.3 91 54.9
QL12p025844 Quercus lobata HOM05D003380 ORTHO05D004232 1.9e-13 79.3 91 54.9
TWI34G1105 Tripterygium wilfordii HOM05D003380 ORTHO05D004232 1.9e-13 79.3 96 53.1
Atru.chr13.1615 Acer truncatum HOM05D003380 ORTHO05D004232 2.5e-13 79.0 88 55.7
Atru.chr7.2690 Acer truncatum HOM05D003380 ORTHO05D004232 2.5e-13 79.0 88 55.7
ATR0626G170 Amborella trichopoda HOM05D003380 ORTHO05D004232 2.5e-13 79.0 101 47.5
EL10Ac2g03687 Beta vulgaris HOM05D003380 ORTHO05D004232 2.5e-13 79.0 91 53.8
BcaNung01533 Brassica carinata HOM05D003380 ORTHO05D004232 2.5e-13 79.0 98 49.0
CANSAT25G3289 Cannabis sativa HOM05D003380 ORTHO05D004232 2.5e-13 79.0 91 53.8
CDE04G3274 Ceratophyllum demersum HOM05D003380 ORTHO05D004232 2.5e-13 79.0 101 48.5
AUR62020647 Chenopodium quinoa HOM05D003380 ORTHO05D004232 2.5e-13 79.0 91 53.8
AUR62038728 Chenopodium quinoa HOM05D003380 ORTHO05D004232 2.5e-13 79.0 91 53.8
ECA240G0102 Erigeron canadensis HOM05D003380 ORTHO05D004232 2.5e-13 79.0 91 52.7
Migut.J00835 Erythranthe guttata HOM05D003380 ORTHO05D004232 2.5e-13 79.0 88 54.5
HanXRQChr03g0081271 Helianthus annuus HOM05D003380 ORTHO05D004232 2.5e-13 79.0 91 52.7
Lsat_1_v5_gn_5_56460 Lactuca sativa HOM05D003380 ORTHO05D004232 2.5e-13 79.0 91 52.7
MD08G1124600 Malus domestica HOM05D003380 ORTHO05D004232 2.5e-13 79.0 99 50.5
Nitab4.5_0000404g0220 Nicotiana tabacum HOM05D003380 ORTHO05D004232 2.5e-13 79.0 86 57.0
Phvul.009G103400 Phaseolus vulgaris HOM05D003380 ORTHO05D004232 2.5e-13 79.0 97 50.5
C07p58510 Brassica napus HOM05D003380 ORTHO05D004232 3.2e-13 78.6 98 49.0
Dinv12605 Davidia involucrata HOM05D003380 ORTHO05D004232 3.2e-13 78.6 88 54.5
Oeu021030.1 Olea europaea HOM05D003380 ORTHO05D004232 3.2e-13 78.6 91 53.8
Oeu036948.2 Olea europaea HOM05D003380 ORTHO05D004232 3.2e-13 78.6 91 53.8
SEGI_36081 Sequoiadendron giganteum HOM05D003380 ORTHO05D004232 3.2e-13 78.6 102 49.0
PGSC0003DMG400009772 Solanum tuberosum HOM05D003380 ORTHO05D004232 3.2e-13 78.6 91 52.7
Aqoxy7G02672 Aquilegia oxysepala HOM05D003380 ORTHO05D004232 4.2e-13 78.2 91 54.9
Dinv37493 Davidia involucrata HOM05D003380 ORTHO05D004232 4.2e-13 78.2 91 51.6
Migut.L01915 Erythranthe guttata HOM05D003380 ORTHO05D004232 4.2e-13 78.2 88 55.7
Lj6A275T63 Lonicera japonica HOM05D003380 ORTHO05D004232 4.2e-13 78.2 91 53.8
Solyc07g016200.3 Solanum lycopersicum HOM05D003380 ORTHO05D004232 4.2e-13 78.2 91 51.6
Sopen07g005910 Solanum pennellii HOM05D003380 ORTHO05D004232 4.2e-13 78.2 91 51.6
TPR.G12492 Trifolium pratense HOM05D003380 ORTHO05D004232 4.2e-13 78.2 97 50.5
Actinidia02482 Actinidia chinensis HOM05D003380 ORTHO05D004232 5.5e-13 77.8 88 54.5
AT4G31300 Arabidopsis thaliana HOM05D003380 ORTHO05D004232 5.5e-13 77.8 98 49.0
Gohir.D05G068600 Gossypium hirsutum HOM05D003380 ORTHO05D004232 5.5e-13 77.8 98 51.0
Gorai.009G069600 Gossypium raimondii HOM05D003380 ORTHO05D004232 5.5e-13 77.8 98 51.0
MD15G1103300 Malus domestica HOM05D003380 ORTHO05D004232 5.5e-13 77.8 97 50.5
PGR044G1928 Punica granatum HOM05D003380 ORTHO05D004232 5.5e-13 77.8 90 55.6
Rhsim01G0218400 Rhododendron simsii HOM05D003380 ORTHO05D004232 5.5e-13 77.8 91 52.7
Atru.chr7.2666 Acer truncatum HOM05D003380 ORTHO05D004232 7.2e-13 77.4 88 54.5
Nn1g03129 Nelumbo nucifera HOM05D003380 ORTHO05D004232 7.2e-13 77.4 98 49.0
Sabra18G0120300 Salix brachista HOM05D003380 ORTHO05D004232 7.2e-13 77.4 91 52.7
unitig_578.g16397 Utricularia gibba HOM05D003380 ORTHO05D004232 7.2e-13 77.4 91 52.7
Cc00_g00190 Coffea canephora HOM05D003380 ORTHO05D004232 9.5e-13 77.0 91 53.8
Eucgr.C02133 Eucalyptus grandis HOM05D003380 ORTHO05D004232 9.5e-13 77.0 88 53.4
Hund03262 Selenicereus undatus HOM05D003380 ORTHO05D004232 9.5e-13 77.0 102 49.0
TWI63G0177 Tripterygium wilfordii HOM05D003380 ORTHO05D004232 9.5e-13 77.0 98 51.0
GSVIVG01035567001 Vitis vinifera HOM05D003380 ORTHO05D004232 9.5e-13 77.0 72 61.1
Zm00001eb270240 Zea mays HOM05D003380 ORTHO05D004232 9.5e-13 77.0 78 56.4
Potri.018G145900 Populus trichocarpa HOM05D003380 ORTHO05D004232 1.2e-12 76.6 91 52.7
PGSC0003DMG400013685 Solanum tuberosum HOM05D003380 ORTHO05D004232 1.2e-12 76.6 91 52.7
Zm00001eb377530 Zea mays HOM05D003380 ORTHO05D004232 1.2e-12 76.6 78 55.1
Ciclev10009349m.g Citrus clementina HOM05D003380 ORTHO05D004232 1.6e-12 76.3 91 52.7
Nitab4.5_0000899g0140 Nicotiana tabacum HOM05D003380 ORTHO05D004232 1.6e-12 76.3 87 55.2
Nitab4.5_0001535g0020 Nicotiana tabacum HOM05D003380 ORTHO05D004232 1.6e-12 76.3 87 55.2
Potri.006G077900 Populus trichocarpa HOM05D003380 ORTHO05D004232 1.6e-12 76.3 91 52.7
Prupe.1G065200 Prunus persica HOM05D003380 ORTHO05D004232 1.6e-12 76.3 95 48.4
Sabra06G0058900 Salix brachista HOM05D003380 ORTHO05D004232 1.6e-12 76.3 91 52.7
FAN03G3318 Fragaria x ananassa HOM05D003380 ORTHO05D004232 2.1e-12 75.9 97 49.5
Rhsim03G0268700 Rhododendron simsii HOM05D003380 ORTHO05D004232 2.1e-12 75.9 91 51.6
RhsimUnG0051400 Rhododendron simsii HOM05D003380 ORTHO05D004232 2.1e-12 75.9 91 51.6
GSVIVG01032253001 Vitis vinifera HOM05D003380 ORTHO05D004232 2.1e-12 75.9 94 52.1
Mapoly0016s0041 Marchantia polymorpha HOM05D003380 ORTHO05D004232 4.7e-12 74.7 103 44.7
AagrBONN_evm.TU.Sc2ySwM_228.613 Anthoceros agrestis HOM05D003380 ORTHO05D004232 6.1e-12 74.3 94 47.9
Gohir.A05G066200 Gossypium hirsutum HOM05D003380 ORTHO05D004232 6.1e-12 74.3 98 49.0
Os02g0770000 Oryza sativa ssp. japonica HOM05D003380 ORTHO05D004232 6.1e-12 74.3 78 53.8
Os06g0139900 Oryza sativa ssp. japonica HOM05D003380 ORTHO05D004232 6.1e-12 74.3 78 55.1
Actinidia38523 Actinidia chinensis HOM05D003380 ORTHO05D004232 8.0e-12 73.9 88 50.0
FvH4_7g10810 Fragaria vesca HOM05D003380 ORTHO05D004232 8.0e-12 73.9 97 48.5
MBI13_g34299_MAGBIO Magnolia biondii HOM05D003380 ORTHO05D004232 8.0e-12 73.9 109 45.9
Sabra18G0127800 Salix brachista HOM05D003380 ORTHO05D004232 2.3e-11 72.4 95 49.5
DCAR_000673 Daucus carota HOM05D003380 ORTHO05D004232 3.0e-11 72.0 112 46.4
SGA_v2.0_scaffold21G09610 Striga asiatica HOM05D003380 ORTHO05D004232 4.0e-11 71.6 111 44.1
FAN06G1260 Fragaria x ananassa HOM05D003380 ORTHO05D004232 8.8e-11 70.5 97 47.4
FAN06G5002 Fragaria x ananassa HOM05D003380 ORTHO05D004232 8.8e-11 70.5 97 47.4
Nitab4.5_0012992g0020 Nicotiana tabacum HOM05D003380 ORTHO05D285355 1.3e-09 66.6 39 84.6
Pp3c18_17380 Physcomitrium patens HOM05D003380 ORTHO05D004232 1.7e-09 66.2 94 43.6
CBR_g55787 Chara braunii HOM05D003380 ORTHO05D004232 1.1e-08 63.5 75 48.0
Ca_15639_v3 Cicer arietinum L. HOM05D003380 ORTHO05D004232 7.0e-08 60.8 83 47.0
SMO117G0031 Selaginella moellendorffii HOM05D003380 ORTHO05D004232 1.2e-07 60.1 90 41.1
TAR636G3035 Trochodendron aralioides HOM05D003380 ORTHO05D004232 4.5e-07 58.2 63 54.0
DCAR_004564 Daucus carota HOM05D003380 ORTHO05D004232 2.3e-06 55.8 54 55.6
Cre06.g279000 Chlamydomonas reinhardtii HOM05D003380 ORTHO05D004232 2.9e-06 55.5 75 42.7
PRCOL_00006052 Prasinoderma coloniale HOM05D003380 ORTHO05D004232 2.9e-06 55.5 95 37.9
PGSC0003DMG400020027 Solanum tuberosum HOM05D003380 ORTHO05D004232 6.6e-06 54.3 49 59.2
SalBow6G4635 Salvia bowleyana HOM05D003380 ORTHO05D004232 8.6e-06 53.9 49 57.1
Sopen05g027780 Solanum pennellii HOM05D003380 ORTHO05D004232 8.6e-06 53.9 49 59.2


User provided reference genes

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