Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000092g0030 Nicotiana tabacum HOM05D005318 ORTHO05D006791 3.1e-161 571.6 270 100.0
CAN.G39.14 Capsicum annuum HOM05D005318 ORTHO05D006791 5.8e-115 417.9 263 79.1
Solyc02g020980.4 Solanum lycopersicum HOM05D005318 ORTHO05D006791 7.1e-113 411.0 317 66.2
Peaxi162Scf01017g00017 Petunia axillaris HOM05D005318 ORTHO05D006791 4.6e-112 408.3 314 65.9
Oeu064748.1 Olea europaea HOM05D005318 ORTHO05D006791 8.1e-101 370.9 288 61.5
SGA_v2.0_scaffold240G44129 Striga asiatica HOM05D005318 ORTHO05D006791 1.1e-100 370.5 289 60.9
Haze_20288 Corylus avellana HOM05D005318 ORTHO05D006791 2.6e-99 365.9 326 55.2
Dinv26400 Davidia involucrata HOM05D005318 ORTHO05D006791 1.7e-98 363.2 327 57.5
RhsimUnG0019600 Rhododendron simsii HOM05D005318 ORTHO05D006791 1.7e-98 363.2 296 57.8
CiPaw.09G051900 Carya illinoinensis HOM05D005318 ORTHO05D006791 5.5e-97 358.2 346 51.4
TWI74G0513 Tripterygium wilfordii HOM05D005318 ORTHO05D006791 5.5e-97 358.2 327 53.5
Actinidia37854 Actinidia chinensis HOM05D005318 ORTHO05D006791 9.3e-97 357.5 333 55.0
Cfa019951 Carpinus fangiana HOM05D005318 ORTHO05D006791 9.3e-97 357.5 346 52.6
RhsimUnG0019100 Rhododendron simsii HOM05D005318 ORTHO05D006791 2.7e-96 355.9 307 56.0
vmacro07764 Vaccinium macrocarpon HOM05D005318 ORTHO05D006791 2.7e-96 355.9 326 52.8
AUR62018414 Chenopodium quinoa HOM05D005318 ORTHO05D006791 4.6e-96 355.1 292 58.9
Lj2A411T33 Lonicera japonica HOM05D005318 ORTHO05D006791 7.9e-96 354.4 337 54.3
Sc19g0007930 Simmondsia chinensis HOM05D005318 ORTHO05D006791 1.8e-95 353.2 327 55.0
Atru.chr1.1378 Acer truncatum HOM05D005318 ORTHO05D006791 3.9e-95 352.1 325 55.1
Potri.006G031700 Populus trichocarpa HOM05D005318 ORTHO05D006791 1.1e-94 350.5 327 55.4
Potri.016G028900 Populus trichocarpa HOM05D005318 ORTHO05D006791 1.1e-94 350.5 328 55.2
QL07p013739 Quercus lobata HOM05D005318 ORTHO05D006791 1.9e-94 349.7 328 52.1
Sabra06G0021100 Salix brachista HOM05D005318 ORTHO05D006791 3.3e-94 349.0 312 57.1
CSS0014915 Camellia sinensis var. sinensis HOM05D005318 ORTHO05D006791 4.3e-94 348.6 327 52.9
CsaV3_4G029230 Cucumis sativus L. HOM05D005318 ORTHO05D006791 7.4e-94 347.8 299 56.9
AUR62021029 Chenopodium quinoa HOM05D005318 ORTHO05D006791 6.2e-93 344.7 334 53.0
ClCG04G005890 Citrullus lanatus HOM05D005318 ORTHO05D006791 8.2e-93 344.4 302 57.0
Ciclev10010989m.g Citrus clementina HOM05D005318 ORTHO05D006791 1.4e-92 343.6 334 53.9
Eucgr.K01679 Eucalyptus grandis HOM05D005318 ORTHO05D006791 1.4e-92 343.6 327 52.3
ECA236G3220 Erigeron canadensis HOM05D005318 ORTHO05D006791 1.8e-92 343.2 327 53.2
Ah.04g150540 Amaranthus hybridus HOM05D005318 ORTHO05D006791 2.4e-92 342.8 327 53.5
Prupe.7G019400 Prunus persica HOM05D005318 ORTHO05D006791 4.1e-92 342.0 327 52.6
Manes.08G162200 Manihot esculenta HOM05D005318 ORTHO05D006791 9.0e-92 340.9 327 52.9
Sed0003650 Sechium edule HOM05D005318 ORTHO05D006791 9.0e-92 340.9 326 52.5
PGR142G3097 Punica granatum HOM05D005318 ORTHO05D006791 1.2e-91 340.5 350 51.1
Cpa.g.sc92.60 Carica papaya HOM05D005318 ORTHO05D006791 2.6e-91 339.3 300 56.3
MELO3C019135.2 Cucumis melo HOM05D005318 ORTHO05D006791 4.5e-91 338.6 327 52.3
Sabra16G0033000 Salix brachista HOM05D005318 ORTHO05D006791 4.5e-91 338.6 326 54.3
DCAR_013530 Daucus carota HOM05D005318 ORTHO05D006791 5.8e-91 338.2 328 51.8
Lsat_1_v5_gn_8_83900 Lactuca sativa HOM05D005318 ORTHO05D006791 2.2e-90 336.3 338 51.2
FAN26G2899 Fragaria x ananassa HOM05D005318 ORTHO05D006791 3.8e-90 335.5 258 61.2
MD00G1025200 Malus domestica HOM05D005318 ORTHO05D006791 3.8e-90 335.5 335 51.3
Peaxi162Scf00002g04712 Petunia axillaris HOM05D005318 ORTHO05D006791 5.0e-90 335.1 211 78.7
Nitab4.5_0001388g0030 Nicotiana tabacum HOM05D005318 ORTHO05D006791 6.5e-90 334.7 158 98.7
Migut.K00161 Erythranthe guttata HOM05D005318 ORTHO05D006791 8.4e-90 334.3 319 54.2
Glyma.19G125800 Glycine max HOM05D005318 ORTHO05D006791 8.4e-90 334.3 327 52.3
TAR633G2118 Trochodendron aralioides HOM05D005318 ORTHO05D006791 1.1e-89 334.0 306 55.6
HanXRQChr06g0177301 Helianthus annuus HOM05D005318 ORTHO05D006791 3.2e-89 332.4 327 52.0
Lj1g0025305 Lotus japonicus HOM05D005318 ORTHO05D006791 4.2e-89 332.0 325 54.2
Oeu060769.1 Olea europaea HOM05D005318 ORTHO05D006791 5.5e-89 331.6 341 50.7
GSVIVG01025810001 Vitis vinifera HOM05D005318 ORTHO05D006791 5.5e-89 331.6 328 50.0
Hma1.2p1_1135F.1_g260440 Hydrangea macrophylla HOM05D005318 ORTHO05D006791 1.2e-88 330.5 343 50.4
Medtr7g088740 Medicago truncatula HOM05D005318 ORTHO05D006791 1.6e-88 330.1 333 50.5
Glyma.03G121100 Glycine max HOM05D005318 ORTHO05D006791 2.1e-88 329.7 327 51.1
Duzib128G1115 Durio zibethinus HOM05D005318 ORTHO05D006791 2.7e-88 329.3 327 51.4
RhsimUnG0019400 Rhododendron simsii HOM05D005318 ORTHO05D006791 1.0e-87 327.4 249 62.7
RcHm_v2.0_Chr3g0494731 Rosa chinensis HOM05D005318 ORTHO05D006791 1.0e-87 327.4 336 51.2
EL10Ac3g07301 Beta vulgaris HOM05D005318 ORTHO05D006791 1.3e-87 327.0 337 50.1
Thecc.05G118400 Theobroma cacao HOM05D005318 ORTHO05D006791 1.3e-87 327.0 329 51.7
Hund24536 Selenicereus undatus HOM05D005318 ORTHO05D006791 3.0e-87 325.9 345 49.9
Ca_08698_v3 Cicer arietinum L. HOM05D005318 ORTHO05D006791 3.9e-87 325.5 325 50.8
SalBow1G2268 Salvia bowleyana HOM05D005318 ORTHO05D006791 3.9e-87 325.5 347 49.0
TPR.G23186 Trifolium pratense HOM05D005318 ORTHO05D006791 3.9e-87 325.5 328 49.7
PSO384G1877 Papaver somniferum HOM05D005318 ORTHO05D006791 1.1e-86 323.9 328 50.3
PSO339G3620 Papaver somniferum HOM05D005318 ORTHO05D006791 1.9e-86 323.2 328 50.0
Lalb_Chr14g0365451 Lupinus albus HOM05D005318 ORTHO05D006791 4.3e-86 322.0 329 49.8
CANSAT64G0498 Cannabis sativa HOM05D005318 ORTHO05D006791 5.7e-86 321.6 327 50.5
arahy.Tifrunner.gnm1.ann1.HZCB2X Arachis hypogaea HOM05D005318 ORTHO05D006791 7.4e-86 321.2 312 53.2
arahy.Tifrunner.gnm1.ann1.PFNU0X Arachis hypogaea HOM05D005318 ORTHO05D006791 9.7e-86 320.9 312 51.9
Phvul.001G117500 Phaseolus vulgaris HOM05D005318 ORTHO05D006791 1.3e-85 320.5 326 50.6
THA.LOC104803226 Tarenaya hassleriana HOM05D005318 ORTHO05D006791 2.2e-85 319.7 330 50.6
FAN19G2285 Fragaria x ananassa HOM05D005318 ORTHO05D006791 6.9e-84 314.7 315 50.2
Psat0s698g0160 Pisum sativum HOM05D005318 ORTHO05D006791 6.9e-84 314.7 323 48.9
FAN23G1756 Fragaria x ananassa HOM05D005318 ORTHO05D006791 3.4e-83 312.4 337 48.7
MBI19_g45589_MAGBIO Magnolia biondii HOM05D005318 ORTHO05D006791 1.0e-82 310.8 286 53.8
FvH4_1g29260 Fragaria vesca HOM05D005318 ORTHO05D006791 1.7e-82 310.1 318 49.7
Gorai.010G128900 Gossypium raimondii HOM05D005318 ORTHO05D006791 1.9e-81 306.6 327 47.7
Gohir.D06G113100 Gossypium hirsutum HOM05D005318 ORTHO05D006791 5.5e-81 305.1 327 47.7
Aa31LG3G1260 Aethionema arabicum HOM05D005318 ORTHO05D006791 1.4e-79 300.4 333 46.2
Gohir.A06G109000 Gossypium hirsutum HOM05D005318 ORTHO05D006791 1.8e-79 300.1 327 46.5
BraA05t19191Z Brassica rapa HOM05D005318 ORTHO05D006791 3.0e-79 299.3 331 46.5
Carub.0004s2316 Capsella rubella HOM05D005318 ORTHO05D006791 3.9e-79 298.9 332 46.7
BolC4t21874H Brassica oleracea HOM05D005318 ORTHO05D006791 1.1e-78 297.4 331 45.9
AL4G38790 Arabidopsis lyrata HOM05D005318 ORTHO05D006791 1.5e-78 297.0 332 46.7
AT2G40840 Arabidopsis thaliana HOM05D005318 ORTHO05D006791 1.5e-78 297.0 332 46.7
A05p01930 Brassica napus HOM05D005318 ORTHO05D006791 1.5e-78 297.0 331 46.2
CARHR135960 Cardamine hirsuta HOM05D005318 ORTHO05D006791 2.5e-78 296.2 332 47.0
Aqoxy1G00050 Aquilegia oxysepala HOM05D005318 ORTHO05D006791 3.3e-78 295.8 329 47.4
Thhalv10016195m.g Eutrema salsugineum HOM05D005318 ORTHO05D006791 1.7e-77 293.5 330 46.1
Sp4g23170 Schrenkiella parvula HOM05D005318 ORTHO05D006791 1.7e-77 293.5 354 44.6
BcaB06g29184 Brassica carinata HOM05D005318 ORTHO05D006791 9.1e-76 287.7 343 44.9
BcaC02g12738 Brassica carinata HOM05D005318 ORTHO05D006791 2.0e-75 286.6 339 44.5
Zm00001eb329980 Zea mays HOM05D005318 ORTHO05D006791 1.4e-73 280.4 321 45.5
C04p02280 Brassica napus HOM05D005318 ORTHO05D006791 4.2e-73 278.9 357 42.3
Os07g0662900 Oryza sativa ssp. japonica HOM05D005318 ORTHO05D006791 4.7e-72 275.4 327 45.9
CDE08G1108 Ceratophyllum demersum HOM05D005318 ORTHO05D006791 3.0e-71 272.7 328 45.1
unitig_736.g22282 Utricularia gibba HOM05D005318 ORTHO05D006791 1.5e-70 270.4 285 49.8
HPP92_014255 Vanilla planifolia HOM05D005318 ORTHO05D006791 2.8e-69 266.2 341 43.7
Cc06_g21280 Coffea canephora HOM05D005318 ORTHO05D006791 5.5e-65 251.9 162 69.8
ATR0782G050 Amborella trichopoda HOM05D005318 ORTHO05D006791 1.2e-64 250.8 390 37.2
Mapoly0011s0190 Marchantia polymorpha HOM05D005318 ORTHO05D006791 2.5e-57 226.5 321 37.7
SMO327G0045 Selaginella moellendorffii HOM05D005318 ORTHO05D006791 6.1e-56 221.9 287 43.2
Sopen00g008430 Solanum pennellii HOM05D005318 ORTHO05D006791 2.3e-55 219.9 109 91.7
Sopen02g004480 Solanum pennellii HOM05D005318 ORTHO05D006791 2.3e-55 219.9 109 91.7
AagrBONN_evm.TU.Sc2ySwM_344.1228 Anthoceros agrestis HOM05D005318 ORTHO05D006791 8.8e-55 218.0 344 34.6
Pp3c15_25660 Physcomitrium patens HOM05D005318 ORTHO05D006791 7.0e-52 208.4 324 38.0
SMO203G0025 Selaginella moellendorffii HOM05D005318 ORTHO05D006791 6.5e-50 201.8 302 38.7
CBR_g6687 Chara braunii HOM05D005318 ORTHO05D006791 1.3e-34 151.0 303 32.3
Cc06_g21270 Coffea canephora HOM05D005318 ORTHO05D006791 1.8e-31 140.6 68 95.6
MCO02G281 Micromonas commoda HOM05D005318 ORTHO05D006791 1.2e-30 137.9 340 27.1
COL.COLO4_33521 Corchorus olitorius HOM05D005318 ORTHO05D006791 1.7e-29 134.0 87 67.8
CDE09G0019 Ceratophyllum demersum HOM05D005318 ORTHO05D006791 1.2e-24 117.9 65 81.5
Cre02.g095126 Chlamydomonas reinhardtii HOM05D005318 ORTHO05D006791 1.2e-24 117.9 325 28.3
PRCOL_00001049 Prasinoderma coloniale HOM05D005318 ORTHO05D006791 7.8e-19 98.6 67 62.7
Zm00001eb002650 Zea mays HOM05D005318 ORTHO05D006791 8.6e-10 68.6 36 86.1
Zm00001eb016430 Zea mays HOM05D005318 ORTHO05D006791 8.6e-10 68.6 36 86.1
PRCOL_00004061 Prasinoderma coloniale HOM05D003809 ORTHO05D003935 3.3e-09 66.6 86 34.9
Sopen09g035960 Solanum pennellii HOM05D001235 ORTHO05D005684 1.8e-07 60.8 98 34.7
Solyc09g098040.3 Solanum lycopersicum HOM05D001235 ORTHO05D005684 3.1e-07 60.1 98 34.7
FAN02G0645 Fragaria x ananassa HOM05D003809 ORTHO05D003935 2.6e-06 57.0 86 30.2
FAN09G2283 Fragaria x ananassa HOM05D003809 ORTHO05D003935 2.6e-06 57.0 86 30.2
Cre02.g091750 Chlamydomonas reinhardtii HOM05D003809 ORTHO05D003935 4.4e-06 56.2 123 26.8
Cre06.g269650 Chlamydomonas reinhardtii HOM05D003809 ORTHO05D003935 7.6e-06 55.5 107 28.0
FvH4_6g11650 Fragaria vesca HOM05D003809 ORTHO05D003935 7.6e-06 55.5 86 29.1


User provided reference genes

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