Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000091g0050 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.1e-116 423.3 216 100.0
Nitab4.5_0000032g0290 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.5e-85 317.8 221 76.0
Nitab4.5_0013890g0010 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.4e-81 305.4 221 72.9
Nitab4.5_0000091g0060 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.4e-79 300.1 210 76.2
Nitab4.5_0000091g0210 Nicotiana tabacum HOM05D007644 ORTHO05D010915 4.5e-78 295.0 201 79.1
Nitab4.5_0000091g0130 Nicotiana tabacum HOM05D007644 ORTHO05D010915 8.6e-77 290.8 202 77.2
Nitab4.5_0000091g0110 Nicotiana tabacum HOM05D007644 ORTHO05D010915 8.0e-75 284.3 147 97.3
Nitab4.5_0000091g0030 Nicotiana tabacum HOM05D007644 ORTHO05D285044 9.2e-71 270.8 195 76.4
Nitab4.5_0000688g0230 Nicotiana tabacum HOM05D007644 ORTHO05D283105 7.8e-70 267.7 209 71.3
Nitab4.5_0000032g0340 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.0e-69 265.8 209 68.9
Nitab4.5_0000091g0140 Nicotiana tabacum HOM05D007644 ORTHO05D010915 5.0e-69 265.0 195 74.9
Nitab4.5_0000688g0260 Nicotiana tabacum HOM05D007644 ORTHO05D010915 7.3e-60 234.6 181 74.0
Nitab4.5_0007855g0090 Nicotiana tabacum HOM05D007644 ORTHO05D010915 8.6e-53 211.1 209 63.6
Nitab4.5_0000091g0200 Nicotiana tabacum HOM05D007644 ORTHO05D010915 9.5e-52 207.6 149 75.8
Nitab4.5_0000091g0120 Nicotiana tabacum HOM05D007644 ORTHO05D010915 8.4e-48 194.5 111 89.2
Nitab4.5_0000688g0250 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.0e-45 186.0 132 75.0
PGSC0003DMG400029116 Solanum tuberosum HOM05D000164 ORTHO05D010915 1.5e-44 183.7 220 43.2
Nitab4.5_0007855g0060 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.1e-43 179.9 131 73.3
Nitab4.5_0007855g0020 Nicotiana tabacum HOM05D007644 ORTHO05D285986 1.8e-42 176.8 266 47.7
Solyc04g051160.1 Solanum lycopersicum HOM05D000164 ORTHO05D010915 3.9e-37 159.1 220 43.2
Peaxi162Scf00664g00012 Petunia axillaris HOM05D000164 ORTHO05D010915 1.6e-35 153.7 220 40.9
Nitab4.5_0001374g0010 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.8e-35 152.9 293 40.3
Nitab4.5_0000688g0240 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.6e-35 152.5 134 62.7
Nitab4.5_0000688g0220 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.4e-33 146.0 99 75.8
Nitab4.5_0000091g0220 Nicotiana tabacum HOM05D007644 ORTHO05D283227 2.9e-32 142.9 97 77.3
Nitab4.5_0000091g0150 Nicotiana tabacum HOM05D007644 ORTHO05D010915 4.6e-30 135.6 87 82.8
Nitab4.5_0002943g0100 Nicotiana tabacum HOM05D007644 ORTHO05D286234 3.3e-28 129.4 97 72.2
Nitab4.5_0000091g0160 Nicotiana tabacum HOM05D007644 ORTHO05D010915 9.6e-28 127.9 87 80.5
Nitab4.5_0000091g0170 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.3e-27 127.5 87 79.3
Nitab4.5_0000091g0180 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.4e-26 123.2 90 72.2
Nitab4.5_0000375g0120 Nicotiana tabacum HOM05D007644 ORTHO05D010915 9.0e-26 121.3 177 44.1
Nitab4.5_0007855g0030 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.7e-24 117.1 85 75.3
Nitab4.5_0007855g0070 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.2e-24 116.7 130 54.6
Nitab4.5_0002943g0150 Nicotiana tabacum HOM05D007644 ORTHO05D285905 5.5e-23 112.1 89 66.3
Nitab4.5_0001374g0020 Nicotiana tabacum HOM05D007644 ORTHO05D010915 6.7e-21 105.1 96 65.6
Nitab4.5_0001374g0050 Nicotiana tabacum HOM05D007644 ORTHO05D284814 2.8e-19 99.8 77 70.1
Nitab4.5_0000091g0230 Nicotiana tabacum HOM05D007644 ORTHO05D282256 4.8e-19 99.0 92 60.9
Nitab4.5_0001374g0110 Nicotiana tabacum HOM05D007644 ORTHO05D285840 1.1e-18 97.8 184 39.7
Nitab4.5_0001374g0130 Nicotiana tabacum HOM05D007644 ORTHO05D285991 1.1e-18 97.8 79 67.1
Sopen04g022490 Solanum pennellii HOM05D000164 ORTHO05D010915 1.8e-18 97.1 148 39.2
Nitab4.5_0002943g0080 Nicotiana tabacum HOM05D007644 ORTHO05D286396 3.1e-18 96.3 122 49.2
Nitab4.5_0000091g0090 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.6e-17 93.2 60 73.3
Nitab4.5_0007855g0080 Nicotiana tabacum HOM05D007644 ORTHO05D010915 4.5e-17 92.4 115 47.8
Nitab4.5_0001374g0120 Nicotiana tabacum HOM05D007644 ORTHO05D285903 3.8e-16 89.4 79 59.5
Nitab4.5_0008374g0050 Nicotiana tabacum HOM05D007644 ORTHO05D283714 4.9e-16 89.0 100 57.0
Nitab4.5_0001374g0160 Nicotiana tabacum HOM05D007644 ORTHO05D284644 6.5e-16 88.6 72 70.8
Nitab4.5_0002943g0160 Nicotiana tabacum HOM05D007644 ORTHO05D286775 1.1e-15 87.8 65 73.8
Nitab4.5_0000091g0240 Nicotiana tabacum HOM05D007644 ORTHO05D010915 3.2e-15 86.3 81 59.3
Nitab4.5_0002943g0050 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.1e-14 83.6 63 73.0
Nitab4.5_0000688g0180 Nicotiana tabacum HOM05D007644 ORTHO05D010915 7.9e-14 81.6 70 62.9
Nitab4.5_0000961g0080 Nicotiana tabacum HOM05D007644 ORTHO05D284320 1.0e-13 81.3 93 53.8
Nitab4.5_0008374g0060 Nicotiana tabacum HOM05D007644 ORTHO05D283712 1.3e-13 80.9 58 74.1
Nitab4.5_0002211g0200 Nicotiana tabacum HOM05D007644 ORTHO05D010915 7.4e-12 75.1 79 54.4
Nitab4.5_0000091g0250 Nicotiana tabacum HOM05D007644 ORTHO05D283046 9.0e-10 68.2 92 48.9
Nitab4.5_0000688g0270 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.2e-09 67.8 49 75.5
Nitab4.5_0002943g0090 Nicotiana tabacum HOM05D007644 ORTHO05D284849 2.6e-09 66.6 46 78.3
Nitab4.5_0009785g0070 Nicotiana tabacum HOM05D007644 ORTHO05D283483 4.5e-09 65.9 57 64.9
Nitab4.5_0000032g0210 Nicotiana tabacum HOM05D007644 ORTHO05D285251 1.3e-08 64.3 65 53.8
Nitab4.5_0002943g0110 Nicotiana tabacum HOM05D007644 ORTHO05D282284 1.7e-08 63.9 91 46.2
TWI09G1287 Tripterygium wilfordii HOM05D000164 ORTHO05D000096 1.7e-08 63.9 193 28.0
MSTRG.9998 Avicennia marina HOM05D000164 ORTHO05D000096 2.2e-08 63.5 201 23.9
Nitab4.5_0009785g0030 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.2e-08 63.5 78 43.6
Sopen04g027160 Solanum pennellii HOM05D007644 ORTHO05D010915 2.2e-08 63.5 95 36.8
Sopen01g006180 Solanum pennellii HOM05D000164 ORTHO05D000096 2.9e-08 63.2 188 25.0
Solyc01g010530.1 Solanum lycopersicum HOM05D000164 ORTHO05D000096 5.0e-08 62.4 204 25.5
FvH4_2g38270 Fragaria vesca HOM05D000164 ORTHO05D000096 6.5e-08 62.0 213 23.9
Eucgr.B01091 Eucalyptus grandis HOM05D000164 ORTHO05D000096 8.5e-08 61.6 190 27.9
Lj3C778T1 Lonicera japonica HOM05D000164 ORTHO05D000096 8.5e-08 61.6 191 24.6
CiPaw.15G179500 Carya illinoinensis HOM05D000164 ORTHO05D000096 1.1e-07 61.2 199 29.6
Rhsim04G0205600 Rhododendron simsii HOM05D000164 ORTHO05D000096 1.1e-07 61.2 217 22.1
Duzib150G0033 Durio zibethinus HOM05D000164 ORTHO05D000096 1.4e-07 60.8 194 27.8
Sabra18G0096300 Salix brachista HOM05D000164 ORTHO05D000096 1.4e-07 60.8 200 30.0
SGA_v2.0_scaffold39G15281 Striga asiatica HOM05D000164 ORTHO05D000096 1.4e-07 60.8 195 25.1
CARHR249630 Cardamine hirsuta HOM05D000164 ORTHO05D000096 1.9e-07 60.5 192 28.6
Actinidia23486 Actinidia chinensis HOM05D000164 ORTHO05D000096 2.5e-07 60.1 191 23.6
Nitab4.5_0001374g0180 Nicotiana tabacum HOM05D007644 ORTHO05D283541 2.5e-07 60.1 45 75.6
Zm00001eb159990 Zea mays HOM05D000164 ORTHO05D000096 2.5e-07 60.1 206 27.2
Cc06_g07350 Coffea canephora HOM05D000164 ORTHO05D000096 3.2e-07 59.7 191 27.2
Nitab4.5_0001374g0040 Nicotiana tabacum HOM05D007644 ORTHO05D284229 3.2e-07 59.7 45 73.3
Actinidia40175 Actinidia chinensis HOM05D000164 ORTHO05D000096 4.2e-07 59.3 191 25.7
Dinv42905 Davidia involucrata HOM05D000164 ORTHO05D000096 4.2e-07 59.3 193 26.4
Dinv43196 Davidia involucrata HOM05D000164 ORTHO05D000096 4.2e-07 59.3 193 26.4
THA.LOC104808928 Tarenaya hassleriana HOM05D000164 ORTHO05D000096 4.2e-07 59.3 191 26.7
CiPaw.16G117100 Carya illinoinensis HOM05D000164 ORTHO05D000096 5.5e-07 58.9 178 28.7
Gohir.D06G048466 Gossypium hirsutum HOM05D000164 ORTHO05D000096 5.5e-07 58.9 205 28.3
Gorai.010G054500 Gossypium raimondii HOM05D000164 ORTHO05D000096 5.5e-07 58.9 205 28.3
Nitab4.5_0002211g0220 Nicotiana tabacum HOM05D007644 ORTHO05D010915 5.5e-07 58.9 54 63.0
Nitab4.5_0003000g0040 Nicotiana tabacum HOM05D007644 ORTHO05D285181 5.5e-07 58.9 67 47.8
QL02p091521 Quercus lobata HOM05D000164 ORTHO05D000096 5.5e-07 58.9 199 27.6
Thecc.09G142800 Theobroma cacao HOM05D000164 ORTHO05D000096 5.5e-07 58.9 173 27.2
Ah.14g078640 Amaranthus hybridus HOM05D000164 ORTHO05D000096 7.2e-07 58.5 194 26.8
DCAR_019350 Daucus carota HOM05D000164 ORTHO05D000096 7.2e-07 58.5 194 27.3
Gohir.A06G048700 Gossypium hirsutum HOM05D000164 ORTHO05D000096 7.2e-07 58.5 205 28.3
Medtr0204s0040 Medicago truncatula HOM05D000164 ORTHO05D000096 9.3e-07 58.2 180 28.9
Medtr4g116770 Medicago truncatula HOM05D000164 ORTHO05D000096 9.3e-07 58.2 180 28.9
Oeu028784.1 Olea europaea HOM05D000164 ORTHO05D000096 9.3e-07 58.2 194 27.8
Thecc.04G228100 Theobroma cacao HOM05D000164 ORTHO05D000096 9.3e-07 58.2 198 26.3
Aqoxy4G00080 Aquilegia oxysepala HOM05D000164 ORTHO05D000096 1.2e-06 57.8 200 27.5
BolC9t53095H Brassica oleracea HOM05D000164 ORTHO05D000096 1.2e-06 57.8 189 28.6
Manes.03G180600 Manihot esculenta HOM05D000164 ORTHO05D000096 1.2e-06 57.8 222 23.0
Nitab4.5_0008374g0030 Nicotiana tabacum HOM05D007644 ORTHO05D285383 1.2e-06 57.8 35 85.7
Peaxi162Scf00347g00126 Petunia axillaris HOM05D000164 ORTHO05D000096 1.2e-06 57.8 194 26.3
QL02p091535 Quercus lobata HOM05D000164 ORTHO05D000096 1.2e-06 57.8 199 27.1
SGA_v2.0_scaffold229G43352 Striga asiatica HOM05D000164 ORTHO05D000096 1.2e-06 57.8 200 27.0
Nitab4.5_0003647g0110 Nicotiana tabacum HOM05D007644 ORTHO05D010915 1.6e-06 57.4 51 62.7
Potri.018G113300 Populus trichocarpa HOM05D000164 ORTHO05D000096 1.6e-06 57.4 200 29.5
Zm00001eb110690 Zea mays HOM05D000164 ORTHO05D000096 1.6e-06 57.4 206 26.7
MSTRG.4017 Avicennia marina HOM05D000164 ORTHO05D000096 2.1e-06 57.0 169 23.7
EL10Ac3g07078 Beta vulgaris HOM05D000164 ORTHO05D000096 2.1e-06 57.0 183 24.6
CSS0011579 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000096 2.1e-06 57.0 191 23.6
CSS0024355 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000096 2.1e-06 57.0 191 23.6
Nn1g02256 Nelumbo nucifera HOM05D000164 ORTHO05D000096 2.1e-06 57.0 190 25.8
Nitab4.5_0002211g0210 Nicotiana tabacum HOM05D007644 ORTHO05D010915 2.1e-06 57.0 52 65.4
Rhsim03G0253700 Rhododendron simsii HOM05D000164 ORTHO05D000096 2.1e-06 57.0 194 26.8
GSVIVG01017935001 Vitis vinifera HOM05D000164 ORTHO05D000096 2.1e-06 57.0 185 23.2
GSVIVG01036440001 Vitis vinifera HOM05D000164 ORTHO05D000096 2.1e-06 57.0 196 24.5
Aa31sc880G10 Aethionema arabicum HOM05D000164 ORTHO05D000096 2.7e-06 56.6 191 26.7
AagrBONN_evm.TU.Sc2ySwM_228.1503 Anthoceros agrestis HOM05D000164 ORTHO05D000096 2.7e-06 56.6 198 23.2
Aqoxy2G03357 Aquilegia oxysepala HOM05D000164 ORTHO05D000096 2.7e-06 56.6 197 24.4
A09p01500 Brassica napus HOM05D000164 ORTHO05D000096 2.7e-06 56.6 189 27.5
CSS0019618 Camellia sinensis var. sinensis HOM05D000164 ORTHO05D000096 2.7e-06 56.6 191 23.6
PSO104G0179 Papaver somniferum HOM05D000164 ORTHO05D000096 2.7e-06 56.6 191 25.1
PSO421G0553 Papaver somniferum HOM05D000164 ORTHO05D000096 2.7e-06 56.6 191 25.1
SalBow2G2684 Salvia bowleyana HOM05D000164 ORTHO05D000096 2.7e-06 56.6 217 24.4
Solyc03g005140.2 Solanum lycopersicum HOM05D000164 ORTHO05D000096 2.7e-06 56.6 188 23.4
Sopen03g001150 Solanum pennellii HOM05D000164 ORTHO05D000096 2.7e-06 56.6 188 23.4
Carub.0006s3518 Capsella rubella HOM05D000164 ORTHO05D000096 3.6e-06 56.2 189 27.0
Cc03_g03530 Coffea canephora HOM05D000164 ORTHO05D000096 3.6e-06 56.2 186 24.7
COL.COLO4_24081 Corchorus olitorius HOM05D000164 ORTHO05D000096 3.6e-06 56.2 205 27.8
DCAR_007392 Daucus carota HOM05D000164 ORTHO05D000096 3.6e-06 56.2 165 25.5
Migut.G00320 Erythranthe guttata HOM05D000164 ORTHO05D000096 3.6e-06 56.2 201 23.4
Nitab4.5_0002211g0190 Nicotiana tabacum HOM05D007644 ORTHO05D285697 3.6e-06 56.2 39 61.5
Oeu029582.1 Olea europaea HOM05D000164 ORTHO05D000096 3.6e-06 56.2 191 24.6
Oeu029583.1 Olea europaea HOM05D000164 ORTHO05D000096 3.6e-06 56.2 191 24.6
Oeu049275.1 Olea europaea HOM05D000164 ORTHO05D000096 3.6e-06 56.2 203 24.6
Oeu049276.1 Olea europaea HOM05D000164 ORTHO05D000096 3.6e-06 56.2 203 24.6
Potri.006G189100 Populus trichocarpa HOM05D000164 ORTHO05D000096 3.6e-06 56.2 207 30.0
PGR142G3892 Punica granatum HOM05D000164 ORTHO05D000096 3.6e-06 56.2 197 26.9
Sabra06G0144700 Salix brachista HOM05D000164 ORTHO05D001889 3.6e-06 56.2 205 28.8
PGSC0003DMG400013384 Solanum tuberosum HOM05D000164 ORTHO05D000096 3.6e-06 56.2 190 23.2
unitig_0.g2507 Utricularia gibba HOM05D000164 ORTHO05D000096 3.6e-06 56.2 175 26.9
vmacro06112 Vaccinium macrocarpon HOM05D000164 ORTHO05D000096 3.6e-06 56.2 194 25.8
CAN.G873.4 Capsicum annuum HOM05D000164 ORTHO05D000096 4.6e-06 55.8 163 22.7
Lj3C760T2 Lonicera japonica HOM05D000164 ORTHO05D000096 4.6e-06 55.8 186 23.7
Lalb_Chr05g0210921 Lupinus albus HOM05D000164 ORTHO05D000096 4.6e-06 55.8 200 25.0
MD13G1190300 Malus domestica HOM05D000164 ORTHO05D000096 4.6e-06 55.8 196 23.5
Sabra06G0145600 Salix brachista HOM05D000164 ORTHO05D000096 4.6e-06 55.8 205 28.8
Sopen07g003060 Solanum pennellii HOM05D000164 ORTHO05D000096 4.6e-06 55.8 194 26.3
SGA_v2.0_scaffold39G15283 Striga asiatica HOM05D000164 ORTHO05D000096 4.6e-06 55.8 217 24.4
TWI34G1688 Tripterygium wilfordii HOM05D000164 ORTHO05D000096 4.6e-06 55.8 194 26.3
Zm00001eb008810 Zea mays HOM05D000164 ORTHO05D000096 4.6e-06 55.8 213 23.9
ATR0629G011 Amborella trichopoda HOM05D000164 ORTHO05D000096 6.1e-06 55.5 194 26.8
MSTRG.19629 Avicennia marina HOM05D000164 ORTHO05D000096 6.1e-06 55.5 200 28.0
BraA09t35811Z Brassica rapa HOM05D000164 ORTHO05D000096 6.1e-06 55.5 189 27.0
Dinv38430 Davidia involucrata HOM05D000164 ORTHO05D000096 6.1e-06 55.5 191 24.1
Gohir.A12G197400 Gossypium hirsutum HOM05D000164 ORTHO05D000096 6.1e-06 55.5 174 27.6
Gorai.008G215100 Gossypium raimondii HOM05D000164 ORTHO05D000096 6.1e-06 55.5 174 27.6
PSO017G3219 Papaver somniferum HOM05D000164 ORTHO05D000096 6.1e-06 55.5 201 24.4
PSO675G2619 Papaver somniferum HOM05D000164 ORTHO05D000096 6.1e-06 55.5 200 27.5
Potri.003G121300 Populus trichocarpa HOM05D000164 ORTHO05D000096 6.1e-06 55.5 178 23.0
Potri.010G090000 Populus trichocarpa HOM05D000164 ORTHO05D000096 6.1e-06 55.5 196 23.0
Prupe.1G156900 Prunus persica HOM05D000164 ORTHO05D000096 6.1e-06 55.5 197 25.4
Solyc07g006970.4 Solanum lycopersicum HOM05D000164 ORTHO05D000096 6.1e-06 55.5 194 25.8
TAR626G1180 Trochodendron aralioides HOM05D000164 ORTHO05D000096 6.1e-06 55.5 202 25.7
unitig_60.g25521 Utricularia gibba HOM05D000164 ORTHO05D000096 6.1e-06 55.5 196 26.0
VMungo0720G0601 Vigna mungo HOM05D000164 ORTHO05D000096 6.1e-06 55.5 187 26.7
VMungo1309G1788 Vigna mungo HOM05D000164 ORTHO05D000096 6.1e-06 55.5 183 26.8
AUR62024437 Chenopodium quinoa HOM05D000164 ORTHO05D000096 7.9e-06 55.1 197 24.9
Cc00_g16800 Coffea canephora HOM05D000164 ORTHO05D000096 7.9e-06 55.1 188 25.5
COL.COLO4_10236 Corchorus olitorius HOM05D000164 ORTHO05D000096 7.9e-06 55.1 191 25.7
Dinv38431 Davidia involucrata HOM05D000164 ORTHO05D000096 7.9e-06 55.1 191 23.6
Migut.G00319 Erythranthe guttata HOM05D000164 ORTHO05D000096 7.9e-06 55.1 201 23.4
Manes.04G053100 Manihot esculenta HOM05D000164 ORTHO05D000096 7.9e-06 55.1 184 25.5
Nn8g39736 Nelumbo nucifera HOM05D000164 ORTHO05D000096 7.9e-06 55.1 194 27.3
Oeu040776.2 Olea europaea HOM05D000164 ORTHO05D000096 7.9e-06 55.1 216 25.5
Rhsim03G0254000 Rhododendron simsii HOM05D000164 ORTHO05D000096 7.9e-06 55.1 194 26.3
Sabra05G0074800 Salix brachista HOM05D000164 ORTHO05D000096 7.9e-06 55.1 185 25.4
SalBow2G3452 Salvia bowleyana HOM05D000164 ORTHO05D000096 7.9e-06 55.1 213 23.0
Sp7g19600 Schrenkiella parvula HOM05D000164 ORTHO05D000096 7.9e-06 55.1 184 22.8


User provided reference genes

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