Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000090g0200 Nicotiana tabacum HOM05D006999 ORTHO05D008936 0.0e+00 1110.1 656 100.0
Nitab4.5_0004292g0030 Nicotiana tabacum HOM05D006999 ORTHO05D008936 4.3e-305 1050.8 656 95.9
PGSC0003DMG400001186 Solanum tuberosum HOM05D006999 ORTHO05D008936 1.9e-281 972.2 656 84.5
Sopen02g015710 Solanum pennellii HOM05D006999 ORTHO05D008936 2.1e-280 968.8 656 84.0
Solyc02g065510.1 Solanum lycopersicum HOM05D006999 ORTHO05D008936 6.5e-277 957.2 656 83.5
CAN.G93.18 Capsicum annuum HOM05D006999 ORTHO05D008936 1.3e-274 949.5 656 87.3
Peaxi162Scf00019g00154 Petunia axillaris HOM05D006999 ORTHO05D008936 9.7e-265 916.8 658 79.9
Cc05_g07730 Coffea canephora HOM05D006999 ORTHO05D008936 6.4e-208 728.0 656 58.1
Oeu049321.1 Olea europaea HOM05D006999 ORTHO05D008936 1.1e-204 717.2 655 57.1
Dinv39939 Davidia involucrata HOM05D006999 ORTHO05D008936 3.3e-204 715.7 653 59.1
Oeu049309.1 Olea europaea HOM05D006999 ORTHO05D008936 3.6e-203 712.2 655 56.6
MSTRG.15411 Avicennia marina HOM05D006999 ORTHO05D008936 2.6e-201 706.1 656 57.5
CSS0009159 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 6.0e-198 694.9 650 56.9
Dinv29387 Davidia involucrata HOM05D006999 ORTHO05D008936 1.7e-197 693.3 628 58.0
CSS0003698 Camellia sinensis var. sinensis HOM05D006999 ORTHO05D008936 3.0e-197 692.6 650 56.8
Migut.K00852 Erythranthe guttata HOM05D006999 ORTHO05D008936 7.3e-196 688.0 654 55.4
SalBow1G0035 Salvia bowleyana HOM05D006999 ORTHO05D008936 3.6e-187 659.1 623 56.0
DCAR_026261 Daucus carota HOM05D006999 ORTHO05D008936 6.2e-187 658.3 644 56.1
SGA_v2.0_scaffold62G21537 Striga asiatica HOM05D006999 ORTHO05D008936 7.8e-182 641.3 656 53.4
Rhsim02G0229300 Rhododendron simsii HOM05D006999 ORTHO05D008936 2.6e-177 626.3 654 62.7
QL06p044626 Quercus lobata HOM05D006999 ORTHO05D008936 7.1e-175 618.2 655 53.3
Prupe.7G147200 Prunus persica HOM05D006999 ORTHO05D008936 1.8e-173 613.6 632 59.5
vmacro00136 Vaccinium macrocarpon HOM05D006999 ORTHO05D008936 1.5e-172 610.5 650 60.2
RcHm_v2.0_Chr2g0102951 Rosa chinensis HOM05D006999 ORTHO05D008936 3.3e-172 609.4 657 52.8
GSVIVG01019040001 Vitis vinifera HOM05D006999 ORTHO05D008936 3.1e-170 602.8 651 50.8
TAR381G1039 Trochodendron aralioides HOM05D006999 ORTHO05D008936 4.0e-170 602.4 658 61.6
CiPaw.01G031400 Carya illinoinensis HOM05D006999 ORTHO05D008936 2.0e-169 600.1 664 51.7
Oeu049317.1 Olea europaea HOM05D006999 ORTHO05D008936 4.5e-169 599.0 551 57.7
Aqoxy6G01000 Aquilegia oxysepala HOM05D006999 ORTHO05D008936 4.9e-168 595.5 627 52.6
ECA232G3871 Erigeron canadensis HOM05D006999 ORTHO05D008936 1.4e-167 594.0 633 56.9
Rhsim02G0225000 Rhododendron simsii HOM05D006999 ORTHO05D008936 7.1e-167 591.7 555 62.0
CANSAT01G1763 Cannabis sativa HOM05D006999 ORTHO05D008936 9.3e-167 591.3 654 50.0
Cpa.g.sc15.132 Carica papaya HOM05D006999 ORTHO05D008936 3.5e-166 589.3 659 50.4
Thecc.01G043300 Theobroma cacao HOM05D006999 ORTHO05D008936 1.8e-165 587.0 653 50.4
Nn5g29479 Nelumbo nucifera HOM05D006999 ORTHO05D008936 1.5e-164 583.9 646 55.4
Sc03g0001020 Simmondsia chinensis HOM05D006999 ORTHO05D008936 1.9e-164 583.6 655 55.6
MD15G1270900 Malus domestica HOM05D006999 ORTHO05D008936 1.3e-163 580.9 636 52.2
FAN23G0790 Fragaria x ananassa HOM05D006999 ORTHO05D008936 3.7e-163 579.3 644 57.8
Gohir.D12G067100 Gossypium hirsutum HOM05D006999 ORTHO05D008936 1.1e-162 577.8 649 49.0
Gorai.008G070500 Gossypium raimondii HOM05D006999 ORTHO05D008936 2.4e-162 576.6 649 49.0
TWI73G1021 Tripterygium wilfordii HOM05D006999 ORTHO05D008936 6.9e-162 575.1 640 59.7
Ca_24822_v3 Cicer arietinum L. HOM05D006999 ORTHO05D008936 7.6e-161 571.6 662 52.3
arahy.Tifrunner.gnm1.ann1.ZB5P2M Arachis hypogaea HOM05D006999 ORTHO05D008936 1.0e-160 571.2 650 51.4
Duzib147G0594 Durio zibethinus HOM05D006999 ORTHO05D008936 1.3e-160 570.9 649 49.8
Lj2g0003627 Lotus japonicus HOM05D006999 ORTHO05D008936 6.5e-160 568.5 646 49.1
Gohir.A12G066700 Gossypium hirsutum HOM05D006999 ORTHO05D008936 1.9e-159 567.0 649 49.3
Manes.13G134700 Manihot esculenta HOM05D006999 ORTHO05D008936 4.2e-159 565.8 652 49.4
Phvul.002G025400 Phaseolus vulgaris HOM05D006999 ORTHO05D008936 2.7e-158 563.1 659 55.2
Actinidia36538 Actinidia chinensis HOM05D006999 ORTHO05D008936 1.1e-156 557.8 662 54.1
VMungo1215G1670 Vigna mungo HOM05D006999 ORTHO05D008936 1.9e-156 557.0 659 54.9
Lj4P134T41 Lonicera japonica HOM05D006999 ORTHO05D008936 6.3e-155 552.0 512 55.9
FvH4_2g07140 Fragaria vesca HOM05D006999 ORTHO05D008936 1.4e-154 550.8 633 49.8
Lalb_Chr09g0322731 Lupinus albus HOM05D006999 ORTHO05D008936 1.4e-154 550.8 639 56.3
PSO541G6186 Papaver somniferum HOM05D006999 ORTHO05D008936 1.2e-153 547.7 658 46.2
Sabra05G0104700 Salix brachista HOM05D006999 ORTHO05D008936 5.9e-153 545.4 644 47.5
Potri.005G128600 Populus trichocarpa HOM05D006999 ORTHO05D008936 1.0e-152 544.7 639 49.0
HanXRQChr09g0265111 Helianthus annuus HOM05D006999 ORTHO05D008936 5.0e-152 542.3 644 52.5
Cfa004253 Carpinus fangiana HOM05D006999 ORTHO05D008936 6.5e-152 542.0 645 49.0
Medtr5g019030 Medicago truncatula HOM05D006999 ORTHO05D008936 6.5e-152 542.0 654 58.0
Glyma.11G063000 Glycine max HOM05D006999 ORTHO05D008936 3.9e-149 532.7 657 58.3
TPR.G34465 Trifolium pratense HOM05D006999 ORTHO05D008936 2.0e-148 530.4 659 53.3
AUR62008030 Chenopodium quinoa HOM05D006999 ORTHO05D008936 4.3e-148 529.3 658 51.7
THA.LOC104826827 Tarenaya hassleriana HOM05D006999 ORTHO05D008936 2.2e-144 516.9 659 45.7
Aa31LG1G15180 Aethionema arabicum HOM05D006999 ORTHO05D008936 5.5e-143 512.3 660 45.5
EL10Ac6g14872 Beta vulgaris HOM05D006999 ORTHO05D008936 2.1e-142 510.4 650 54.2
Eucgr.I02485 Eucalyptus grandis HOM05D006999 ORTHO05D008936 3.6e-142 509.6 647 51.3
AT5G66631 Arabidopsis thaliana HOM05D006999 ORTHO05D008936 1.4e-141 507.7 656 45.6
MBI16_g10978_MAGBIO Magnolia biondii HOM05D006999 ORTHO05D003554 3.3e-140 503.1 625 56.6
Ah.02g126330 Amaranthus hybridus HOM05D006999 ORTHO05D008936 5.7e-140 502.3 651 49.9
CARHR281110 Cardamine hirsuta HOM05D006999 ORTHO05D008936 9.7e-140 501.5 664 44.7
Psat2g162640 Pisum sativum HOM05D006999 ORTHO05D008936 2.8e-139 500.0 653 55.4
BcaC06g34726 Brassica carinata HOM05D006999 ORTHO05D008936 1.4e-138 497.7 647 45.6
BcaB02g10006 Brassica carinata HOM05D006999 ORTHO05D008936 1.5e-137 494.2 650 45.8
Thhalv10005592m.g Eutrema salsugineum HOM05D006999 ORTHO05D008936 5.9e-137 492.3 667 45.0
Sp2g30070 Schrenkiella parvula HOM05D006999 ORTHO05D008936 2.9e-136 490.0 648 45.1
AL8G44870 Arabidopsis lyrata HOM05D006999 ORTHO05D008936 6.5e-136 488.8 657 44.4
BraA07t29457Z Brassica rapa HOM05D006999 ORTHO05D008936 6.5e-136 488.8 647 44.5
A07p17310 Brassica napus HOM05D006999 ORTHO05D008936 5.5e-135 485.7 647 44.7
BolC7t43049H Brassica oleracea HOM05D006999 ORTHO05D008936 9.4e-135 485.0 636 44.8
Atru.chr3.494 Acer truncatum HOM05D006999 ORTHO05D008936 7.0e-130 468.8 503 53.3
Ciclev10027580m.g Citrus clementina HOM05D006999 ORTHO05D008936 2.0e-129 467.2 635 55.9
FvH4_1g14280 Fragaria vesca HOM05D006999 ORTHO05D008936 1.5e-127 461.1 506 50.6
RcHm_v2.0_Chr2g0102871 Rosa chinensis HOM05D006999 ORTHO05D008936 1.9e-127 460.7 488 53.1
Hma1.2p1_2980F.1_g331210 Hydrangea macrophylla HOM05D006999 ORTHO05D008936 3.5e-121 439.9 541 46.8
Carub.0008s2788 Capsella rubella HOM05D006999 ORTHO05D008936 5.0e-120 436.0 519 46.8
HPP92_025826 Vanilla planifolia HOM05D006999 ORTHO05D008936 8.5e-120 435.3 633 41.7
Haze_15147 Corylus avellana HOM05D000909 ORTHO05D000928 7.2e-119 432.2 657 41.2
C07p25190 Brassica napus HOM05D006999 ORTHO05D008936 3.0e-117 426.8 546 44.5
CDE01G0819 Ceratophyllum demersum HOM05D006999 ORTHO05D008936 2.8e-115 420.2 645 40.6
ATR0782G111 Amborella trichopoda HOM05D006999 ORTHO05D008936 7.3e-103 379.0 676 37.1
unitig_748.g8403 Utricularia gibba HOM05D006999 ORTHO05D008936 7.8e-97 359.0 386 49.7
SEGI_35610 Sequoiadendron giganteum HOM05D006999 ORTHO05D008936 6.6e-96 355.9 661 39.3
Os01g0167750 Oryza sativa ssp. japonica HOM05D006999 ORTHO05D008936 8.6e-96 355.5 641 38.7
Zm00001eb123240 Zea mays HOM05D006999 ORTHO05D008936 1.5e-92 344.7 619 42.8
Dinv18613 Davidia involucrata HOM05D006999 ORTHO05D008936 1.9e-90 337.8 633 36.7
Dinv26229 Davidia involucrata HOM05D006999 ORTHO05D008936 1.9e-90 337.8 633 36.7
Haze_25752 Corylus avellana HOM05D006999 ORTHO05D008936 3.5e-81 307.0 677 32.6
Cfa021547 Carpinus fangiana HOM05D006999 ORTHO05D008936 4.2e-74 283.5 658 34.0
Cfa003411 Carpinus fangiana HOM05D006999 ORTHO05D008936 9.0e-61 239.2 644 34.9
unitig_748.g8404 Utricularia gibba HOM05D006999 ORTHO05D008936 3.4e-52 210.7 236 50.4
Glyma.01G179201 Glycine max HOM05D006999 ORTHO05D008936 8.7e-48 196.1 227 68.3
Glyma.01G179251 Glycine max HOM05D006999 ORTHO05D008936 6.7e-40 169.9 230 43.9
COL.COLO4_22153 Corchorus olitorius HOM05D000225 ORTHO05D003554 5.5e-34 150.2 194 43.8
FAN28G3023 Fragaria x ananassa HOM05D006999 ORTHO05D008936 1.0e-32 146.0 178 42.7
Actinidia12102 Actinidia chinensis HOM05D006999 ORTHO05D008936 1.6e-25 122.1 154 46.8
HanXRQChr09g0268161 Helianthus annuus HOM05D006999 ORTHO05D008936 2.0e-20 105.1 151 41.1
Aa31LG1G15170 Aethionema arabicum HOM05D000909 ORTHO05D008936 2.5e-18 98.2 149 43.6
Pp3c4_14140 Physcomitrium patens HOM05D006999 ORTHO05D008936 1.4e-13 82.4 173 27.7
AagrBONN_evm.TU.Sc2ySwM_344.143 Anthoceros agrestis HOM05D004079 ORTHO05D008936 5.5e-10 70.5 120 33.3
Pp3c1_6490 Physcomitrium patens HOM05D006749 ORTHO05D008352 1.8e-08 65.5 140 30.0
Mapoly0001s0055 Marchantia polymorpha HOM05D004079 ORTHO05D005437 2.3e-08 65.1 170 26.5
EL10Ac6g14214 Beta vulgaris HOM05D006999 ORTHO05D008936 4.0e-08 64.3 155 29.0
MD02G1156600 Malus domestica HOM05D006999 ORTHO05D008936 6.8e-08 63.5 157 33.8
Hma1.2p1_0180F.1_g079710 Hydrangea macrophylla HOM05D002986 ORTHO05D003966 8.8e-08 63.2 177 26.0
Mapoly0026s0011 Marchantia polymorpha HOM05D006999 ORTHO05D008936 1.5e-07 62.4 96 33.3
Gohir.D02G188900 Gossypium hirsutum HOM05D007202 ORTHO05D009125 2.6e-07 61.6 176 27.8
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 3.4e-07 61.2 168 26.2
Prupe.2G122500 Prunus persica HOM05D000104 ORTHO05D009920 4.4e-07 60.8 205 25.4
CDE07G1133 Ceratophyllum demersum HOM05D006596 ORTHO05D008497 5.7e-07 60.5 187 25.1
Gohir.A03G165700 Gossypium hirsutum HOM05D007202 ORTHO05D009125 9.8e-07 59.7 177 28.2
Gorai.005G211700 Gossypium raimondii HOM05D007202 ORTHO05D009125 1.3e-06 59.3 176 27.3
CiPaw.07G116900 Carya illinoinensis HOM05D000424 ORTHO05D002854 1.7e-06 58.9 150 27.3
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 1.7e-06 58.9 157 27.4
MELO3C004182.2 Cucumis melo HOM05D000424 ORTHO05D002854 2.8e-06 58.2 153 28.1
DCAR_030451 Daucus carota HOM05D007409 ORTHO05D009264 2.8e-06 58.2 136 30.1
ATR0003G004 Amborella trichopoda HOM05D002986 ORTHO05D003966 3.7e-06 57.8 153 28.8
FvH4_6g20810 Fragaria vesca HOM05D006596 ORTHO05D008497 3.7e-06 57.8 197 25.9
FAN14G5569 Fragaria x ananassa HOM05D006596 ORTHO05D008497 3.7e-06 57.8 197 25.9
MD01G1088700 Malus domestica HOM05D002391 ORTHO05D003966 6.3e-06 57.0 164 28.0
Medtr7g079860 Medicago truncatula HOM05D000001 ORTHO05D010091 6.3e-06 57.0 140 26.4


User provided reference genes

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