Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000084g0420 Nicotiana tabacum HOM05D002831 ORTHO05D010484 4.6e-35 150.6 72 100.0
Peaxi162Scf00444g00118 Petunia axillaris HOM05D002831 ORTHO05D010484 3.1e-23 111.3 55 92.7
Solyc03g007990.2 Solanum lycopersicum HOM05D002831 ORTHO05D010484 2.9e-21 104.8 51 94.1
CAN.G126.13 Capsicum annuum HOM05D002831 ORTHO05D010484 2.7e-19 98.2 51 88.2
Atru.ctg97_1.17 Acer truncatum HOM05D002831 ORTHO05D010484 1.3e-16 89.4 52 80.8
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 3.7e-16 87.8 62 69.4
Thecc.03G183800 Theobroma cacao HOM05D002831 ORTHO05D010484 4.8e-16 87.4 52 76.9
Potri.017G143300 Populus trichocarpa HOM05D002831 ORTHO05D010484 8.2e-16 86.7 52 80.8
Cc02_g02410 Coffea canephora HOM05D002831 ORTHO05D010484 1.1e-15 86.3 51 74.5
Nitab4.5_0003825g0100 Nicotiana tabacum HOM05D002831 ORTHO05D010484 1.1e-15 86.3 51 82.4
MD01G1208000 Malus domestica HOM05D002831 ORTHO05D010484 1.4e-15 85.9 53 77.4
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 1.8e-15 85.5 52 78.8
Prupe.2G300500 Prunus persica HOM05D002831 ORTHO05D010484 1.8e-15 85.5 52 78.8
CiPaw.06G003400 Carya illinoinensis HOM05D002831 ORTHO05D010484 2.4e-15 85.1 65 67.7
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 2.4e-15 85.1 65 64.6
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 2.4e-15 85.1 52 76.9
Gohir.D09G177300 Gossypium hirsutum HOM05D002831 ORTHO05D010484 5.3e-15 84.0 52 75.0
Nn1g01626 Nelumbo nucifera HOM05D002831 ORTHO05D010484 5.3e-15 84.0 52 80.8
Potri.004G080000 Populus trichocarpa HOM05D002831 ORTHO05D010484 5.3e-15 84.0 52 78.8
Gorai.006G199300 Gossypium raimondii HOM05D002831 ORTHO05D010484 6.9e-15 83.6 52 73.1
Manes.14G022900 Manihot esculenta HOM05D002831 ORTHO05D010484 6.9e-15 83.6 52 76.9
CiPaw.06G003200 Carya illinoinensis HOM05D002831 ORTHO05D010484 9.0e-15 83.2 52 75.0
Gohir.D11G011200 Gossypium hirsutum HOM05D002831 ORTHO05D010484 9.0e-15 83.2 52 75.0
Glyma.20G162551 Glycine max HOM05D002831 ORTHO05D010484 1.5e-14 82.4 52 73.1
Manes.06G152150 Manihot esculenta HOM05D002831 ORTHO05D010484 1.5e-14 82.4 52 75.0
Glyma.09G132600 Glycine max HOM05D002831 ORTHO05D010484 4.5e-14 80.9 51 74.5
Glyma.16G179250 Glycine max HOM05D002831 ORTHO05D010484 4.5e-14 80.9 51 74.5
Prupe.7G027400 Prunus persica HOM05D002831 ORTHO05D010484 4.5e-14 80.9 51 74.5
Gohir.A12G255400 Gossypium hirsutum HOM05D002831 ORTHO05D010484 1.0e-13 79.7 52 71.2
Gohir.D12G256800 Gossypium hirsutum HOM05D002831 ORTHO05D010484 1.0e-13 79.7 52 71.2
Gorai.008G275000 Gossypium raimondii HOM05D002831 ORTHO05D010484 1.0e-13 79.7 52 71.2
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 1.0e-13 79.7 52 73.1
Gohir.A11G012000 Gossypium hirsutum HOM05D002831 ORTHO05D010484 1.3e-13 79.3 52 73.1
CSS0001563 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 2.9e-13 78.2 52 71.2
CSS0038907 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 2.9e-13 78.2 52 71.2
Glyma.10G231251 Glycine max HOM05D002831 ORTHO05D010484 3.8e-13 77.8 52 65.4
MD07G1278600 Malus domestica HOM05D002831 ORTHO05D010484 5.0e-13 77.4 53 67.9
CAN.G204.17 Capsicum annuum HOM05D002831 ORTHO05D010484 7.2e-12 73.6 51 68.6
Cfa016283 Carpinus fangiana HOM05D002831 ORTHO05D004341 7.2e-12 73.6 43 79.1
CiPaw.12G018400 Carya illinoinensis HOM05D002831 ORTHO05D010484 9.4e-12 73.2 44 79.5
Lalb_Chr02g0141241 Lupinus albus HOM05D002831 ORTHO05D010484 9.4e-12 73.2 53 71.7
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 2.7e-11 71.6 55 65.5
VMungo0464G0591 Vigna mungo HOM05D002831 ORTHO05D004341 6.1e-11 70.5 50 70.0
RcHm_v2.0_Chr1g0378241 Rosa chinensis HOM05D002831 ORTHO05D004341 7.9e-11 70.1 52 69.2
FAN03G0192 Fragaria x ananassa HOM05D002831 ORTHO05D010484 1.0e-10 69.7 51 68.6
Nitab4.5_0000248g0010 Nicotiana tabacum HOM05D002831 ORTHO05D004341 1.4e-10 69.3 43 81.4
Lalb_Chr03g0034821 Lupinus albus HOM05D002831 ORTHO05D010484 2.3e-10 68.6 50 64.0
Rhsim03G0190700 Rhododendron simsii HOM05D002831 ORTHO05D004341 2.3e-10 68.6 46 71.7
ClCG05G008350 Citrullus lanatus HOM05D002831 ORTHO05D010484 3.9e-10 67.8 53 64.2
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 5.1e-10 67.4 51 66.7
Carub.0008s1269 Capsella rubella HOM05D002831 ORTHO05D010484 1.5e-09 65.9 52 61.5
Lalb_Chr21g0305231 Lupinus albus HOM05D002831 ORTHO05D010484 2.0e-09 65.5 53 66.0
Sabra06G0007800 Salix brachista HOM05D002831 ORTHO05D010484 2.5e-09 65.1 43 74.4
vmacro09817 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 2.5e-09 65.1 45 68.9
Peaxi162Scf00618g00726 Petunia axillaris HOM05D002831 ORTHO05D010484 9.7e-09 63.2 43 67.4
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 1.3e-08 62.8 45 64.4
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 1.7e-08 62.4 46 60.9
TPR.G7753 Trifolium pratense HOM05D002831 ORTHO05D004341 2.8e-08 61.6 43 69.8
CARHR233120 Cardamine hirsuta HOM05D002831 ORTHO05D010484 6.3e-08 60.5 52 57.7
CSS0020125 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 8.2e-08 60.1 52 59.6
CSS0026204 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 8.2e-08 60.1 52 59.6
Carub.0007s1529 Capsella rubella HOM05D002831 ORTHO05D010484 1.4e-07 59.3 52 55.8
BolC1t02047H Brassica oleracea HOM05D002831 ORTHO05D010484 1.8e-07 58.9 51 58.8
BraA01t01646Z Brassica rapa HOM05D002831 ORTHO05D010484 1.8e-07 58.9 51 58.8
Lalb_Chr06g0161311 Lupinus albus HOM05D002831 ORTHO05D010484 2.4e-07 58.5 44 72.7
Ah.07g206590 Amaranthus hybridus HOM05D002831 ORTHO05D004341 6.9e-07 57.0 52 51.9
Hma1.2p1_0274F.1_g110180 Hydrangea macrophylla HOM05D002831 ORTHO05D004341 9.1e-07 56.6 38 68.4
BolC1t02050H Brassica oleracea HOM05D002831 ORTHO05D010484 1.5e-06 55.8 52 53.8
Oeu045362.1 Olea europaea HOM05D002831 ORTHO05D004341 2.0e-06 55.5 33 75.8
A02p11710 Brassica napus HOM05D002831 ORTHO05D010484 2.6e-06 55.1 40 57.5
VMungo0720G1018 Vigna mungo HOM05D002831 ORTHO05D004341 2.6e-06 55.1 43 62.8
A03p56200 Brassica napus HOM05D002831 ORTHO05D010484 3.4e-06 54.7 75 40.0
BraA03t14690Z Brassica rapa HOM05D002831 ORTHO05D010484 3.4e-06 54.7 75 40.0
BraA01t01649Z Brassica rapa HOM05D002831 ORTHO05D010484 4.5e-06 54.3 52 51.9
Ah.13g069160 Amaranthus hybridus HOM05D004727 ORTHO05D005788 5.9e-06 53.9 52 53.8


User provided reference genes

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