Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 5.2e-153 544.3 263 100.0
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 5.5e-126 454.5 263 83.7
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 5.5e-126 454.5 249 87.1
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 4.6e-125 451.4 263 83.7
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 2.3e-124 449.1 260 83.8
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 4.3e-123 444.9 263 83.7
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 3.5e-117 425.2 251 85.7
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 5.2e-92 341.7 235 66.8
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.4e-89 333.6 268 61.6
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.2e-88 330.5 234 66.2
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 7.7e-88 327.8 240 65.0
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 4.2e-86 322.0 251 62.5
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 4.7e-85 318.5 240 63.8
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 1.0e-84 317.4 243 60.5
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 2.2e-82 309.7 254 60.6
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 8.2e-82 307.8 236 62.3
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 1.1e-81 307.4 234 63.7
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 1.1e-81 307.4 253 58.1
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 1.6e-80 303.5 245 59.2
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 1.9e-78 296.6 234 61.1
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 2.5e-78 296.2 235 59.1
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 9.4e-78 294.3 230 62.6
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 1.2e-77 293.9 245 58.0
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.4e-75 285.8 271 54.6
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 5.7e-75 285.0 248 57.3
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 7.5e-75 284.6 258 57.0
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 7.5e-75 284.6 269 53.5
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 9.8e-75 284.3 231 60.2
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 2.2e-74 283.1 271 52.8
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 8.3e-74 281.2 259 57.1
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 3.5e-72 275.8 232 58.6
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 3.4e-67 259.2 238 56.7
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 3.7e-66 255.8 262 53.8
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 4.1e-65 252.3 260 51.9
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 7.0e-65 251.5 235 54.0
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 1.2e-64 250.8 229 55.0
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 2.3e-63 246.5 252 50.8
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 3.8e-63 245.7 234 55.1
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 4.3e-62 242.3 238 53.4
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 5.6e-62 241.9 234 53.4
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 2.1e-61 240.0 232 53.9
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 2.8e-61 239.6 257 51.0
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 4.7e-61 238.8 260 51.2
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 3.0e-60 236.1 248 51.6
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 5.2e-60 235.3 230 53.5
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.2e-59 234.2 261 47.9
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 1.2e-59 234.2 240 51.2
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 7.5e-59 231.5 257 49.0
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 7.5e-59 231.5 236 51.7
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.3e-58 230.7 232 50.9
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 2.9e-58 229.6 247 50.2
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 3.7e-58 229.2 247 49.0
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 4.9e-58 228.8 230 50.9
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 2.0e-56 223.4 259 48.6
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 2.0e-56 223.4 255 44.7
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 2.7e-56 223.0 231 52.8
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 1.9e-54 216.9 237 49.4
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 1.9e-54 216.9 237 49.4
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 3.3e-54 216.1 237 48.9
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 9.5e-54 214.5 247 47.4
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 9.5e-54 214.5 272 44.5
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 2.1e-53 213.4 236 47.5
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 3.6e-53 212.6 237 47.3
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 3.6e-53 212.6 261 43.7
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 8.0e-53 211.5 246 46.7
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 1.4e-52 210.7 236 46.2
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 2.3e-52 209.9 236 46.2
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 3.1e-52 209.5 256 45.3
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 5.2e-52 208.8 237 48.5
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 8.9e-52 208.0 231 48.5
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 8.9e-52 208.0 256 44.1
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.2e-51 207.6 252 46.0
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 2.0e-51 206.8 246 45.9
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 3.4e-51 206.1 240 49.2
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 3.4e-51 206.1 267 42.3
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 4.4e-51 205.7 237 47.7
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 5.8e-51 205.3 251 45.4
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 5.8e-51 205.3 234 46.2
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 9.8e-51 204.5 262 42.7
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 1.1e-49 201.1 239 48.1
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 1.9e-49 200.3 237 45.1
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 4.1e-49 199.1 237 45.6
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 4.6e-48 195.7 155 59.4
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 3.3e-46 189.5 289 37.0
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 2.8e-45 186.4 166 53.6
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 8.1e-45 184.9 296 37.2
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.8e-44 183.7 249 43.4
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 1.5e-43 180.6 249 41.4
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.2e-42 176.8 138 62.3
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.2e-41 172.9 138 60.1
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 1.4e-36 157.5 251 39.8
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 2.4e-36 156.8 349 29.8
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 1.7e-34 150.6 207 45.4
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 1.9e-33 147.1 240 36.7
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 2.4e-33 146.7 96 74.0
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 3.0e-31 139.8 171 46.8
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 6.6e-31 138.7 125 57.6
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 5.6e-30 135.6 100 62.0
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 3.8e-26 122.9 153 43.8
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.9e-23 112.8 138 42.8
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.6e-21 107.5 190 35.3
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 2.4e-20 103.6 95 53.7
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.1e-12 78.2 145 37.9
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 1.4e-12 77.8 237 26.6
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 3.4e-11 73.2 258 27.1
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 5.8e-11 72.4 48 68.8
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 1.9e-09 67.4 275 24.0
Cpa.g.sc28.27 Carica papaya HOM05D007273 ORTHO05D009230 2.5e-06 57.0 58 48.3
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 7.4e-06 55.5 281 23.1


User provided reference genes

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