Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 0.0e+00 1226.1 621 100.0
Nitab4.5_0005140g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009625 6.4e-109 399.1 456 50.4
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 2.6e-94 350.5 555 41.3
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 3.7e-88 330.1 363 52.3
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 5.9e-62 243.0 605 30.4
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 2.2e-53 214.5 289 43.9
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 5.0e-53 213.4 622 29.3
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 8.8e-42 176.0 279 38.0
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 2.0e-41 174.9 471 31.0
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 6.3e-40 169.9 280 38.2
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 8.3e-40 169.5 214 44.4
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 7.7e-38 162.9 266 38.7
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.0e-37 160.2 496 28.8
Solyc05g045890.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 5.0e-37 160.2 258 38.0
Sc14g0003260 Simmondsia chinensis HOM05D004909 ORTHO05D009625 1.1e-36 159.1 255 37.6
Nitab4.5_0000580g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.1e-35 154.8 89 86.5
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 1.8e-34 151.8 304 32.2
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 2.3e-34 151.4 301 33.9
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 3.0e-34 151.0 299 34.1
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 7.0e-31 139.8 284 33.8
Sopen05g027060 Solanum pennellii HOM05D000213 ORTHO05D011567 7.0e-31 139.8 209 39.2
EL10Ac1g02202 Beta vulgaris HOM05D004909 ORTHO05D009625 2.0e-30 138.3 185 41.6
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 7.8e-30 136.3 261 36.0
Aqoxy2G02243 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 8.3e-24 116.3 151 44.4
Aqoxy3G01128 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 8.3e-24 116.3 151 44.4
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 2.7e-22 111.3 231 33.8
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 1.7e-21 108.6 238 34.0
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.1e-20 105.9 231 32.5
EL10Ac1g01430 Beta vulgaris HOM05D004909 ORTHO05D009625 4.3e-20 104.0 143 41.3
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 9.8e-17 92.8 231 28.6
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 1.1e-15 89.4 192 31.8
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 1.4e-15 89.0 282 29.8
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 1.4e-15 89.0 282 29.8
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 1.4e-15 89.0 213 31.0
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 5.4e-15 87.0 90 50.0
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.2e-15 86.3 99 43.4
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.2e-15 86.3 99 43.4
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.2e-15 86.3 99 43.4
Oeu057349.1 Olea europaea HOM05D013539 ORTHO05D014921 2.1e-14 85.1 174 31.6
CAN.G490.20 Capsicum annuum HOM05D004909 ORTHO05D009625 7.8e-14 83.2 189 32.3
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 1.0e-13 82.8 103 47.6
SEGI_03043 Sequoiadendron giganteum HOM05D004909 ORTHO05D019368 1.0e-13 82.8 139 36.7
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 1.1e-12 79.3 125 39.2
Sopen05g027030 Solanum pennellii HOM05D000213 ORTHO05D011567 4.3e-12 77.4 188 28.2
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 7.3e-12 76.6 90 43.3
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.1e-11 75.1 93 46.2
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 3.6e-11 74.3 93 45.2
AUR62043791 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.2e-11 73.6 100 42.0
AUR62043902 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.2e-11 73.6 100 42.0
Potri.007G061821 Populus trichocarpa HOM05D004909 ORTHO05D009316 1.4e-10 72.4 176 33.5
Nitab4.5_0003083g0030 Nicotiana tabacum HOM05D004909 ORTHO05D009316 5.2e-10 70.5 93 44.1
EL10Ac1g01432 Beta vulgaris HOM05D004909 ORTHO05D009316 4.4e-09 67.4 128 32.8
Duzib116G0563 Durio zibethinus HOM05D004909 ORTHO05D009625 7.6e-09 66.6 151 32.5
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 4.9e-08 63.9 255 26.3
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 6.4e-08 63.5 71 47.9
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 3.2e-07 61.2 90 41.1
SHI41760 Sapria himalayana HOM05D009967 ORTHO05D009625 5.4e-07 60.5 76 46.1
Lalb_Chr00c21g0405631 Lupinus albus HOM05D004909 ORTHO05D009316 1.6e-06 58.9 174 27.0
Nitab4.5_0001796g0070 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.6e-06 58.9 69 46.4
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 1.6e-06 58.9 69 44.9
RcHm_v2.0_MTg0498751 Rosa chinensis HOM05D004909 ORTHO05D009625 2.7e-06 58.2 137 29.9
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 3.5e-06 57.8 141 31.2
unitig_87.g28025 Utricularia gibba HOM05D004909 ORTHO05D009316 4.6e-06 57.4 94 33.0
SHI29963 Sapria himalayana HOM05D009967 ORTHO05D009625 6.0e-06 57.0 62 51.6
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 7.8e-06 56.6 68 44.1


User provided reference genes

Program Settings