Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 0.0e+00 1296.6 664 100.0
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 0.0e+00 1221.5 686 92.7
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.2e-216 756.1 696 60.5
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 3.2e-215 752.3 696 59.6
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 3.2e-215 752.3 688 61.5
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 4.2e-215 751.9 690 61.2
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 7.9e-214 747.7 690 61.2
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 2.8e-211 739.2 691 60.8
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 2.8e-211 739.2 845 53.3
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 3.7e-203 712.2 698 57.6
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 2.4e-202 709.5 762 54.2
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 5.3e-170 602.1 695 51.7
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 2.7e-169 599.7 702 51.4
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 5.9e-169 598.6 706 51.0
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 1.2e-161 574.3 724 48.9
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 1.6e-161 573.9 718 48.7
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 5.7e-156 555.4 708 49.6
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 4.9e-155 552.4 644 51.4
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 7.7e-153 545.0 718 47.8
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 1.6e-150 537.3 868 43.7
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 3.6e-150 536.2 709 46.8
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 1.1e-146 524.6 694 49.0
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 9.2e-146 521.5 706 48.4
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 4.6e-145 519.2 712 46.8
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.9e-144 516.2 711 46.3
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 5.0e-144 515.8 711 45.9
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 6.6e-144 515.4 702 46.2
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 9.5e-143 511.5 700 45.9
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 9.5e-143 511.5 704 46.6
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 1.6e-142 510.8 712 47.2
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.6e-137 494.2 707 43.7
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 2.7e-137 493.4 696 44.3
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 2.7e-137 493.4 702 44.7
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 6.0e-137 492.3 669 48.1
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.7e-136 490.7 694 47.0
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 5.0e-136 489.2 694 43.9
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.5e-135 486.9 663 48.0
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 5.6e-135 485.7 709 44.4
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 3.6e-134 483.0 703 44.2
PGSC0003DMG400029919 Solanum tuberosum HOM05D003626 ORTHO05D004255 8.1e-134 481.9 437 64.8
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 1.1e-133 481.5 724 44.6
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 1.5e-132 477.6 711 42.9
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.0e-132 477.2 700 45.6
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 4.4e-132 476.1 709 44.0
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 4.4e-132 476.1 704 44.2
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 7.5e-132 475.3 704 45.2
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 7.5e-132 475.3 713 43.1
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.3e-131 474.6 698 43.7
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 6.4e-131 472.2 707 43.3
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 8.3e-131 471.9 654 45.4
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 1.1e-130 471.5 673 46.5
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 1.9e-130 470.7 718 43.2
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 4.1e-130 469.5 701 44.2
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 5.4e-130 469.2 707 44.6
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 5.4e-130 469.2 681 45.1
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.6e-129 467.6 714 42.9
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 2.3e-128 463.8 699 43.8
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 3.0e-128 463.4 708 43.5
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 8.6e-128 461.8 714 42.6
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 1.5e-127 461.1 711 42.9
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.5e-127 461.1 692 42.9
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 3.3e-127 459.9 716 43.4
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 1.2e-126 458.0 668 44.2
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 2.8e-126 456.8 710 42.4
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 8.1e-126 455.3 710 41.3
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 8.1e-126 455.3 713 41.4
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 1.1e-125 454.9 696 44.5
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 8.9e-125 451.8 687 45.3
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 3.4e-124 449.9 700 43.3
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 1.7e-123 447.6 687 44.4
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 1.6e-121 441.0 708 42.2
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 7.8e-121 438.7 763 38.9
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 1.0e-120 438.3 623 44.9
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 3.0e-120 436.8 702 42.3
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 6.6e-120 435.6 728 41.3
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 8.6e-120 435.3 714 42.4
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 3.3e-119 433.3 701 40.7
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 5.6e-119 432.6 687 41.0
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 2.8e-118 430.3 710 41.0
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 6.2e-118 429.1 702 42.2
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 3.1e-117 426.8 769 37.2
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 5.2e-117 426.0 813 37.5
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 8.9e-117 425.2 697 41.8
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 8.9e-117 425.2 695 41.4
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 6.4e-115 419.1 621 44.9
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.4e-114 417.2 701 40.1
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.2e-114 416.4 696 42.5
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 7.1e-114 415.6 696 40.7
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 1.2e-113 414.8 532 48.7
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 1.2e-113 414.8 704 40.8
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 3.0e-112 410.2 698 40.7
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.6e-112 409.1 687 42.4
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 8.7e-112 408.7 698 40.0
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 1.5e-111 407.9 765 41.7
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 2.5e-111 407.1 697 40.2
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 2.5e-111 407.1 701 39.9
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.3e-111 406.4 691 41.8
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 4.3e-111 406.4 714 40.2
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 4.8e-110 402.9 647 41.9
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 6.2e-110 402.5 624 44.4
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.2e-108 398.3 687 42.1
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.0e-108 397.5 637 42.2
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 5.8e-108 396.0 697 39.2
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 7.6e-108 395.6 821 37.9
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 8.4e-107 392.1 601 43.1
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 1.6e-105 387.9 699 38.3
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 7.9e-105 385.6 711 37.4
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 2.3e-104 384.0 614 42.3
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 4.0e-101 373.2 574 43.4
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 3.2e-98 363.6 723 38.5
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.1e-98 362.5 540 44.6
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 7.1e-98 362.5 699 35.8
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 3.9e-96 356.7 777 35.6
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 7.4e-95 352.4 724 38.7
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 4.0e-93 346.7 669 36.8
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 6.9e-93 345.9 670 36.7
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.3e-91 341.7 596 40.8
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 2.9e-91 340.5 868 32.5
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 1.1e-90 338.6 541 41.4
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.7e-89 334.0 624 38.3
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 3.9e-88 330.1 656 36.7
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 1.3e-86 325.1 656 38.1
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 2.1e-86 324.3 670 36.9
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 2.8e-86 323.9 656 35.7
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 3.7e-86 323.6 629 36.6
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 1.4e-85 321.6 661 34.5
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.4e-85 320.9 628 37.7
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 1.4e-82 311.6 669 34.4
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 2.5e-82 310.8 666 35.0
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 2.5e-82 310.8 727 33.6
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 3.2e-82 310.5 659 35.1
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 7.2e-82 309.3 295 53.9
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 1.2e-81 308.5 657 33.9
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 1.6e-81 308.1 668 35.0
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 2.1e-81 307.8 663 33.5
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 6.1e-81 306.2 567 37.4
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 2.3e-80 304.3 286 56.3
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 1.5e-79 301.6 666 34.7
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 4.3e-79 300.1 667 33.3
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 4.3e-79 300.1 554 39.2
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.1e-77 295.4 232 64.2
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.1e-77 295.4 391 45.5
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 2.0e-76 291.2 663 33.8
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 2.6e-76 290.8 665 33.8
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.2e-73 282.0 702 34.5
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.3e-67 261.9 290 49.3
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 6.5e-67 259.6 670 34.5
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.1e-66 258.8 295 47.8
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.4e-64 251.9 382 41.4
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 2.3e-64 251.1 637 32.5
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 1.3e-59 235.3 220 55.0
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 5.5e-58 229.9 582 33.0
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 9.4e-58 229.2 255 45.9
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.5e-50 204.5 139 71.2
CSS0005394 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.2e-49 202.2 412 38.3
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 2.4e-45 188.0 142 66.9
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 7.7e-44 183.0 471 37.4
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.5e-39 168.7 215 52.1
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 4.9e-38 163.7 184 50.5
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 3.1e-37 161.0 210 43.8
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.1e-29 136.0 241 35.7
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 2.7e-28 131.3 360 28.9
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 4.6e-28 130.6 211 40.3
MBI17_g24687_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 3.3e-26 124.4 477 33.3
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 8.9e-24 116.3 136 51.5
MBI18_g29423_MAGBIO Magnolia biondii HOM05D003626 ORTHO05D004255 2.2e-22 111.7 702 26.8
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 1.4e-21 109.0 85 68.2
Ca_13872_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.9e-21 108.6 445 31.2
Oeu035062.1 Olea europaea HOM05D003626 ORTHO05D004255 1.3e-14 85.9 178 33.7
TAR375G0736 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.2e-12 79.3 102 45.1
ECA233G5443 Erigeron canadensis HOM05D003626 ORTHO05D004255 7.8e-12 76.6 65 55.4
TAR375G0355 Trochodendron aralioides HOM05D003626 ORTHO05D004255 1.3e-11 75.9 66 62.1
Pp3c10_4110 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.7e-11 75.5 83 49.4
Rhsim05G0045800 Rhododendron simsii HOM05D003626 ORTHO05D004255 1.9e-10 72.0 323 29.1
HPP92_028446 Vanilla planifolia HOM05D003626 ORTHO05D004255 3.3e-10 71.2 118 42.4
TAR636G0984 Trochodendron aralioides HOM05D003626 ORTHO05D004255 3.1e-08 64.7 55 58.2
AagrBONN_evm.TU.Sc2ySwM_362.2615 Anthoceros agrestis HOM05D003626 ORTHO05D004255 4.4e-07 60.8 167 31.7


User provided reference genes

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