Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000079g0160 Nicotiana tabacum HOM05D004360 ORTHO05D005195 9.1e-102 373.6 195 100.0
Solyc11g045030.2 Solanum lycopersicum HOM05D004360 ORTHO05D005195 5.2e-81 304.7 201 79.6
Sopen11g020480 Solanum pennellii HOM05D004360 ORTHO05D005195 2.4e-78 295.8 201 78.1
Peaxi162Scf00078g00103 Petunia axillaris HOM05D004360 ORTHO05D005195 1.3e-76 290.0 194 76.8
CAN.G970.20 Capsicum annuum HOM05D004360 ORTHO05D005195 5.2e-73 278.1 209 73.2
PGSC0003DMG400006668 Solanum tuberosum HOM05D004360 ORTHO05D005195 1.3e-71 273.5 201 73.1
Hma1.2p1_0016F.1_g010960 Hydrangea macrophylla HOM05D004360 ORTHO05D005195 8.0e-66 254.2 201 68.7
Peaxi162Scf00818g00320 Petunia axillaris HOM05D004360 ORTHO05D005195 1.7e-63 246.5 177 72.3
CSS0027083 Camellia sinensis var. sinensis HOM05D004360 ORTHO05D005195 4.9e-63 245.0 194 70.1
Nitab4.5_0007335g0050 Nicotiana tabacum HOM05D004360 ORTHO05D005195 4.9e-63 245.0 201 68.2
Actinidia01542 Actinidia chinensis HOM05D004360 ORTHO05D005195 1.4e-62 243.4 201 66.7
SGA_v2.0_scaffold118G32638 Striga asiatica HOM05D004360 ORTHO05D005195 2.7e-61 239.2 203 65.5
PGSC0003DMG400033136 Solanum tuberosum HOM05D004360 ORTHO05D005195 4.6e-61 238.4 201 63.7
GSVIVG01037160001 Vitis vinifera HOM05D004360 ORTHO05D005195 4.6e-61 238.4 193 68.4
Nitab4.5_0007657g0070 Nicotiana tabacum HOM05D004360 ORTHO05D005195 1.3e-60 236.9 208 65.4
Lj7A416T39 Lonicera japonica HOM05D004360 ORTHO05D005195 3.0e-60 235.7 174 70.7
TWI12G0674 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 3.0e-60 235.7 200 68.5
Sopen06g022920 Solanum pennellii HOM05D004360 ORTHO05D005195 5.0e-60 235.0 201 62.7
Solyc06g064450.3 Solanum lycopersicum HOM05D004360 ORTHO05D005195 8.6e-60 234.2 201 62.7
Glyma.04G110500 Glycine max HOM05D004360 ORTHO05D005195 1.5e-59 233.4 195 65.1
Glyma.06G323900 Glycine max HOM05D004360 ORTHO05D005195 2.5e-59 232.6 193 65.8
Oeu020627.1 Olea europaea HOM05D004360 ORTHO05D005195 2.5e-59 232.6 199 65.3
Manes.02G202700 Manihot esculenta HOM05D004360 ORTHO05D005195 7.3e-59 231.1 198 65.7
Oeu028624.1 Olea europaea HOM05D004360 ORTHO05D005195 7.3e-59 231.1 220 59.5
TWI18G1157 Tripterygium wilfordii HOM05D004360 ORTHO05D005195 3.6e-58 228.8 170 72.4
DCAR_014061 Daucus carota HOM05D004360 ORTHO05D005195 4.7e-58 228.4 198 62.6
CAN.G14.46 Capsicum annuum HOM05D004360 ORTHO05D005195 1.1e-57 227.3 192 62.5
Potri.003G048300 Populus trichocarpa HOM05D004360 ORTHO05D005195 1.4e-57 226.9 190 67.9
PGR083G1110 Punica granatum HOM05D004360 ORTHO05D005195 1.4e-57 226.9 190 64.7
QL09p001278 Quercus lobata HOM05D004360 ORTHO05D005195 1.4e-57 226.9 194 63.4
MSTRG.1609 Avicennia marina HOM05D004360 ORTHO05D005195 2.3e-57 226.1 203 63.1
Psat5g232320 Pisum sativum HOM05D004360 ORTHO05D005195 3.1e-57 225.7 191 62.3
Manes.18G109100 Manihot esculenta HOM05D004360 ORTHO05D005195 5.2e-57 224.9 190 65.8
arahy.Tifrunner.gnm1.ann1.4Y3JNF Arachis hypogaea HOM05D004360 ORTHO05D005195 6.8e-57 224.6 190 65.3
CANSAT56G1596 Cannabis sativa HOM05D004360 ORTHO05D005195 6.8e-57 224.6 190 64.2
MELO3C008103.2 Cucumis melo HOM05D004360 ORTHO05D005195 6.8e-57 224.6 198 64.6
CsaV3_2G033320 Cucumis sativus L. HOM05D004360 ORTHO05D005195 1.5e-56 223.4 198 64.1
Cc10_g16090 Coffea canephora HOM05D004360 ORTHO05D005195 2.0e-56 223.0 201 63.7
TPR.G25525 Trifolium pratense HOM05D004360 ORTHO05D005195 2.0e-56 223.0 193 62.7
Lj3g0027106 Lotus japonicus HOM05D004360 ORTHO05D005195 2.6e-56 222.6 190 63.7
PSO761G0584 Papaver somniferum HOM05D004360 ORTHO05D005195 3.4e-56 222.2 190 64.7
TAR628G1251 Trochodendron aralioides HOM05D004360 ORTHO05D005195 4.4e-56 221.9 188 66.0
Nn5g27232 Nelumbo nucifera HOM05D004360 ORTHO05D005195 7.5e-56 221.1 190 65.8
Potri.013G095200 Populus trichocarpa HOM05D004360 ORTHO05D005195 7.5e-56 221.1 190 64.2
Duzib116G0053 Durio zibethinus HOM05D004360 ORTHO05D005195 1.3e-55 220.3 190 66.3
Actinidia29366 Actinidia chinensis HOM05D004360 ORTHO05D005195 1.7e-55 219.9 227 55.9
Atru.chr13.2581 Acer truncatum HOM05D004360 ORTHO05D005195 2.2e-55 219.5 193 61.1
CARHR261230 Cardamine hirsuta HOM05D004360 ORTHO05D005195 2.2e-55 219.5 200 63.0
ClCG11G008280 Citrullus lanatus HOM05D004360 ORTHO05D005195 2.2e-55 219.5 185 65.9
COL.COLO4_25070 Corchorus olitorius HOM05D004360 ORTHO05D005195 2.2e-55 219.5 190 67.4
Hund16918 Selenicereus undatus HOM05D004360 ORTHO05D005195 2.2e-55 219.5 193 62.2
Thhalv10029009m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 2.9e-55 219.2 185 64.9
AL6G43950 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 3.7e-55 218.8 174 68.4
Eucgr.F04085 Eucalyptus grandis HOM05D004360 ORTHO05D005195 3.7e-55 218.8 190 64.2
MBI03_g07140_MAGBIO Magnolia biondii HOM05D004360 ORTHO05D005195 3.7e-55 218.8 199 59.8
MD05G1006100 Malus domestica HOM05D004360 ORTHO05D005195 3.7e-55 218.8 193 63.2
Prupe.8G003400 Prunus persica HOM05D004360 ORTHO05D005195 3.7e-55 218.8 185 65.9
THA.LOC104806751 Tarenaya hassleriana HOM05D004360 ORTHO05D005195 3.7e-55 218.8 193 60.6
Carub.0006s2871 Capsella rubella HOM05D004360 ORTHO05D005195 4.9e-55 218.4 200 62.5
Sp6g07270 Schrenkiella parvula HOM05D004360 ORTHO05D005195 4.9e-55 218.4 185 65.9
Carub.0001s3168 Capsella rubella HOM05D004360 ORTHO05D005195 6.4e-55 218.0 154 71.4
Lalb_Chr18g0048451 Lupinus albus HOM05D004360 ORTHO05D005195 6.4e-55 218.0 188 63.8
A02p26710 Brassica napus HOM05D004360 ORTHO05D005195 1.1e-54 217.2 178 66.3
BraA02t07674Z Brassica rapa HOM05D004360 ORTHO05D005195 1.1e-54 217.2 178 66.3
Aqoxy5G01853 Aquilegia oxysepala HOM05D004360 ORTHO05D005195 1.4e-54 216.9 190 63.2
Medtr3g006190 Medicago truncatula HOM05D004360 ORTHO05D005195 1.4e-54 216.9 195 61.0
Phvul.005G002300 Phaseolus vulgaris HOM05D004360 ORTHO05D005195 1.4e-54 216.9 191 62.3
AT4G10140 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 1.9e-54 216.5 185 64.9
BcaC03g16418 Brassica carinata HOM05D004360 ORTHO05D005195 1.9e-54 216.5 178 65.7
C02p42460 Brassica napus HOM05D004360 ORTHO05D005195 1.9e-54 216.5 178 65.7
A09p32780 Brassica napus HOM05D004360 ORTHO05D005195 2.4e-54 216.1 154 71.4
BraA09t38813Z Brassica rapa HOM05D004360 ORTHO05D005195 2.4e-54 216.1 154 71.4
Thhalv10008879m.g Eutrema salsugineum HOM05D004360 ORTHO05D005195 2.4e-54 216.1 154 70.8
PSO210G5265 Papaver somniferum HOM05D004360 ORTHO05D005195 2.4e-54 216.1 186 63.4
BcaB05g23914 Brassica carinata HOM05D004360 ORTHO05D005195 3.2e-54 215.7 178 65.7
VMungo1080G0197 Vigna mungo HOM05D004360 ORTHO05D005195 4.1e-54 215.3 191 62.8
Thecc.08G168700 Theobroma cacao HOM05D004360 ORTHO05D005195 5.4e-54 214.9 181 65.7
Gohir.A05G248500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 7.0e-54 214.5 190 63.7
AL1G47880 Arabidopsis lyrata HOM05D004360 ORTHO05D005195 9.2e-54 214.2 154 70.1
BcaC08g43849 Brassica carinata HOM05D004360 ORTHO05D005195 9.2e-54 214.2 154 70.8
BolC6t36383H Brassica oleracea HOM05D004360 ORTHO05D005195 9.2e-54 214.2 154 70.8
AUR62013395 Chenopodium quinoa HOM05D004360 ORTHO05D005195 9.2e-54 214.2 190 63.7
AUR62038546 Chenopodium quinoa HOM05D004360 ORTHO05D005195 1.6e-53 213.4 190 63.2
BcaB07g32992 Brassica carinata HOM05D004360 ORTHO05D005195 2.0e-53 213.0 154 72.1
Gohir.D05G250900 Gossypium hirsutum HOM05D004360 ORTHO05D005195 2.0e-53 213.0 190 63.2
Gorai.009G262300 Gossypium raimondii HOM05D004360 ORTHO05D005195 2.0e-53 213.0 190 63.2
Ciclev10022474m.g Citrus clementina HOM05D004360 ORTHO05D005195 2.7e-53 212.6 154 71.4
C06p12320 Brassica napus HOM05D004360 ORTHO05D005195 3.5e-53 212.2 151 71.5
CDE08G1539 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 1.7e-52 209.9 190 58.9
ATR1089G020 Amborella trichopoda HOM05D004360 ORTHO05D005195 2.3e-52 209.5 190 60.0
AUR62038559 Chenopodium quinoa HOM05D004360 ORTHO05D005195 2.3e-52 209.5 170 67.1
Sed0002471 Sechium edule HOM05D004360 ORTHO05D005195 2.3e-52 209.5 166 67.5
MD10G1002100 Malus domestica HOM05D004360 ORTHO05D005195 3.9e-52 208.8 188 63.3
A09p28790 Brassica napus HOM05D004360 ORTHO05D005195 5.0e-52 208.4 185 62.2
Sed0011254 Sechium edule HOM05D004360 ORTHO05D005195 2.5e-51 206.1 190 60.5
C09p36560 Brassica napus HOM05D004360 ORTHO05D005195 5.6e-51 204.9 173 64.7
EL10Ac1g01286 Beta vulgaris HOM05D004360 ORTHO05D005195 9.5e-51 204.1 151 71.5
Lsat_1_v5_gn_6_109600 Lactuca sativa HOM05D004360 ORTHO05D005195 1.6e-50 203.4 164 65.2
Rhsim12G0001800 Rhododendron simsii HOM05D004360 ORTHO05D005195 3.6e-50 202.2 266 49.2
HanXRQChr08g0226271 Helianthus annuus HOM05D004360 ORTHO05D005195 4.7e-50 201.8 193 59.1
Lsat_1_v5_gn_1_24560 Lactuca sativa HOM05D004360 ORTHO05D005195 4.7e-50 201.8 190 60.0
SEGI_09604 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 6.2e-50 201.4 193 56.5
unitig_8.g4904 Utricularia gibba HOM05D004360 ORTHO05D005195 6.2e-50 201.4 195 53.8
Aa31LG6G7960 Aethionema arabicum HOM05D004360 ORTHO05D005195 1.1e-49 200.7 167 64.1
arahy.Tifrunner.gnm1.ann1.19X5J5 Arachis hypogaea HOM05D004360 ORTHO05D005195 1.4e-49 200.3 175 64.6
FvH4_2g00310 Fragaria vesca HOM05D004360 ORTHO05D005195 1.4e-49 200.3 171 66.7
HanXRQChr12g0369241 Helianthus annuus HOM05D004360 ORTHO05D005195 1.4e-49 200.3 189 58.2
FAN20G2250 Fragaria x ananassa HOM05D004360 ORTHO05D005195 3.1e-49 199.1 178 64.0
ECA247G3060 Erigeron canadensis HOM05D004360 ORTHO05D005195 4.0e-49 198.7 193 58.0
Os05g0105500 Oryza sativa ssp. japonica HOM05D004360 ORTHO05D005195 5.2e-49 198.4 175 58.9
RcHm_v2.0_Chr6g0249591 Rosa chinensis HOM05D004360 ORTHO05D005195 1.2e-48 197.2 169 65.1
HPP92_001197 Vanilla planifolia HOM05D004360 ORTHO05D005195 1.2e-48 197.2 190 56.3
Aa31LG9G11860 Aethionema arabicum HOM05D004360 ORTHO05D005195 4.4e-48 195.3 201 58.7
Medtr4g030060 Medicago truncatula HOM05D004360 ORTHO05D005195 9.9e-48 194.1 191 57.1
Lalb_Chr01g0008181 Lupinus albus HOM05D004360 ORTHO05D005195 1.3e-47 193.7 193 56.5
BraA09t38441Z Brassica rapa HOM05D004360 ORTHO05D005195 2.2e-47 193.0 214 53.7
BolC2t10286H Brassica oleracea HOM05D004360 ORTHO05D005195 3.7e-47 192.2 159 66.0
Gohir.D08G249500 Gossypium hirsutum HOM05D004360 ORTHO05D005195 3.7e-47 192.2 161 65.2
Gorai.004G266100 Gossypium raimondii HOM05D004360 ORTHO05D005195 3.7e-47 192.2 161 65.2
Gohir.A08G229200 Gossypium hirsutum HOM05D004360 ORTHO05D005195 4.9e-47 191.8 161 64.6
HPP92_009217 Vanilla planifolia HOM05D004360 ORTHO05D005195 1.4e-46 190.3 190 58.4
Psat7g229800 Pisum sativum HOM05D004360 ORTHO05D005195 1.9e-46 189.9 190 56.3
BolC9t56489H Brassica oleracea HOM05D004360 ORTHO05D005195 2.4e-46 189.5 202 55.4
HanXRQChr05g0150501 Helianthus annuus HOM05D004360 ORTHO05D005195 4.1e-46 188.7 200 54.5
BcaC04g21022 Brassica carinata HOM05D004360 ORTHO05D005195 4.6e-45 185.3 165 61.8
CDE02G3351 Ceratophyllum demersum HOM05D004360 ORTHO05D005195 6.0e-45 184.9 176 59.1
Zm00001eb289060 Zea mays HOM05D004360 ORTHO05D005195 3.9e-44 182.2 176 55.1
BcaB01g01456 Brassica carinata HOM05D004360 ORTHO05D005195 6.6e-44 181.4 165 62.4
CiPaw.03G012600 Carya illinoinensis HOM05D004360 ORTHO05D005195 5.6e-43 178.3 120 73.3
Haze_14005 Corylus avellana HOM05D004360 ORTHO05D005195 7.3e-43 177.9 122 76.2
Zm00001eb207120 Zea mays HOM05D004360 ORTHO05D005195 1.6e-42 176.8 176 54.0
Migut.C01399 Erythranthe guttata HOM05D004360 ORTHO05D005195 1.1e-41 174.1 197 53.8
Dinv37400 Davidia involucrata HOM05D004360 ORTHO05D005195 2.4e-41 172.9 139 70.5
Sc06g0000070 Simmondsia chinensis HOM05D004360 ORTHO05D005195 4.0e-41 172.2 120 71.7
Ah.05g170480 Amaranthus hybridus HOM05D004360 ORTHO05D005195 1.5e-40 170.2 151 66.2
Duzib116G0205 Durio zibethinus HOM05D004360 ORTHO05D005195 7.6e-40 167.9 119 73.9
PSO210G7326 Papaver somniferum HOM05D004360 ORTHO05D005195 7.6e-40 167.9 147 61.9
SHI16862 Sapria himalayana HOM05D004360 ORTHO05D005195 9.9e-40 167.5 120 68.3
Sabra13G0081200 Salix brachista HOM05D004360 ORTHO05D005195 1.3e-39 167.2 120 73.3
CARHR032930 Cardamine hirsuta HOM05D004360 ORTHO05D005195 3.8e-39 165.6 125 68.8
AT1G33490 Arabidopsis thaliana HOM05D004360 ORTHO05D005195 1.4e-38 163.7 120 70.8
Sp1g28930 Schrenkiella parvula HOM05D004360 ORTHO05D002912 3.2e-38 162.5 120 70.8
SMO143G0101 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 9.2e-38 161.0 157 52.9
Mapoly0022s0158 Marchantia polymorpha HOM05D004360 ORTHO05D005195 1.0e-36 157.5 169 50.3
DCAR_003506 Daucus carota HOM05D005117 ORTHO05D005956 1.3e-36 157.1 129 62.0
SMO356G0006 Selaginella moellendorffii HOM05D004360 ORTHO05D005195 1.5e-35 153.7 164 50.6
TPR.G4421 Trifolium pratense HOM05D004360 ORTHO05D001407 1.5e-35 153.7 146 56.8
AagrBONN_evm.TU.Sc2ySwM_368.413 Anthoceros agrestis HOM05D004360 ORTHO05D005195 4.3e-35 152.1 145 53.8
SEGI_01847 Sequoiadendron giganteum HOM05D004360 ORTHO05D005195 2.1e-34 149.8 171 50.3
Pp3c17_19860 Physcomitrium patens HOM05D004360 ORTHO05D005195 6.2e-34 148.3 152 51.3
Pp3c23_11640 Physcomitrium patens HOM05D004360 ORTHO05D005195 1.2e-32 144.1 178 47.8
CBR_g61487 Chara braunii HOM05D004360 ORTHO05D005195 2.6e-32 142.9 174 45.4
unitig_578.g16114 Utricularia gibba HOM05D004360 ORTHO05D005195 3.2e-30 136.0 135 57.0
BcaB01g01455 Brassica carinata HOM05D004360 ORTHO05D005195 1.3e-28 130.6 95 71.6
TAR375G0667 Trochodendron aralioides HOM05D004360 ORTHO05D005195 2.0e-24 116.7 118 55.1
ECA246G3009 Erigeron canadensis HOM05D004360 ORTHO05D005195 2.6e-24 116.3 87 65.5
HanXRQChr09g0244511 Helianthus annuus HOM05D004360 ORTHO05D005195 5.6e-19 98.6 81 61.7
FAN24G1049 Fragaria x ananassa HOM05D004360 ORTHO05D005195 5.3e-17 92.0 151 43.0
Pp3c14_12450 Physcomitrium patens HOM05D004360 ORTHO05D005195 2.4e-14 83.2 90 48.9
Dinv02982 Davidia involucrata HOM05D004360 ORTHO05D005195 5.1e-12 75.5 46 80.4
Dinv17160 Davidia involucrata HOM05D004360 ORTHO05D005195 5.1e-12 75.5 46 80.4
Dinv04074 Davidia involucrata HOM05D004360 ORTHO05D005195 2.5e-11 73.2 47 76.6
Dinv08764 Davidia involucrata HOM05D004360 ORTHO05D005195 2.4e-09 66.6 46 73.9
arahy.Tifrunner.gnm1.ann1.B7FYB2 Arachis hypogaea HOM05D001689 ORTHO05D001643 1.2e-08 64.3 44 72.7


User provided reference genes

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