Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000078g0130 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.5e-49 199.1 93 100.0
Nitab4.5_0001725g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.6e-30 135.2 79 79.7
Nitab4.5_0000514g0180 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.5e-25 119.4 71 76.1
Nitab4.5_0003465g0040 Nicotiana tabacum HOM05D006812 ORTHO05D012242 4.0e-23 111.3 68 73.5
Nitab4.5_0001047g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.9e-21 105.1 90 63.3
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.6e-17 90.9 83 54.2
Nitab4.5_0000252g0260 Nicotiana tabacum HOM05D006812 ORTHO05D000137 1.2e-16 89.7 83 51.8
Nitab4.5_0000721g0160 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.6e-16 89.4 62 66.1
Nitab4.5_0000688g0120 Nicotiana tabacum HOM05D006812 ORTHO05D012242 6.2e-16 87.4 84 53.6
Nitab4.5_0001708g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-15 86.7 55 63.6
Nitab4.5_0004958g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.1e-15 86.7 80 52.5
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.4e-15 86.3 55 63.6
Nitab4.5_0001171g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.8e-15 85.9 49 73.5
Nitab4.5_0001267g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.1e-15 85.1 50 72.0
Nitab4.5_0000453g0090 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.0e-14 82.4 69 59.4
Nitab4.5_0000759g0120 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.0e-14 82.4 48 72.9
Nitab4.5_0000904g0100 Nicotiana tabacum HOM05D006812 ORTHO05D000137 2.0e-14 82.4 105 45.7
Nitab4.5_0010262g0010 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.0e-14 82.4 55 61.8
Nitab4.5_0006703g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.4e-14 81.3 50 68.0
Nitab4.5_0003132g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.8e-14 80.9 52 67.3
Nitab4.5_0000699g0160 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.3e-13 79.7 48 70.8
Nitab4.5_0000638g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.7e-13 79.3 93 44.1
Nitab4.5_0001317g0150 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.9e-13 78.6 78 52.6
Nitab4.5_0000219g0140 Nicotiana tabacum HOM05D006812 ORTHO05D012242 3.8e-13 78.2 44 77.3
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.9e-13 77.8 47 68.1
Nitab4.5_0002329g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-12 76.3 76 43.4
Nitab4.5_0000487g0040 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.1e-12 73.9 42 73.8
Nitab4.5_0000569g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000137 1.6e-11 72.8 50 66.0
Nitab4.5_0008296g0030 Nicotiana tabacum HOM05D006812 ORTHO05D012242 1.6e-11 72.8 41 75.6
Nitab4.5_0007565g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 1.0e-10 70.1 59 57.6
CANSAT80G1051 Cannabis sativa HOM05D008721 ORTHO05D000137 2.3e-10 68.9 64 50.0
CANSAT25G0487 Cannabis sativa HOM05D008721 ORTHO05D000137 3.0e-10 68.6 64 50.0
CANSAT11G1859 Cannabis sativa HOM05D008721 ORTHO05D000137 6.6e-10 67.4 64 48.4
CANSAT21G0642 Cannabis sativa HOM05D008721 ORTHO05D000137 6.6e-10 67.4 64 48.4
CANSAT21G2500 Cannabis sativa HOM05D008721 ORTHO05D000137 6.6e-10 67.4 64 48.4
CANSAT54G1761 Cannabis sativa HOM05D008721 ORTHO05D000137 6.6e-10 67.4 64 48.4
Peaxi162Scf01147g00017 Petunia axillaris HOM05D010453 ORTHO05D000137 8.7e-10 67.0 76 43.4
ATR0441G001 Amborella trichopoda HOM05D008721 ORTHO05D000137 1.1e-09 66.6 64 48.4
Nitab4.5_0000263g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.1e-09 66.6 94 35.1
CAN.G77.20 Capsicum annuum HOM05D005063 ORTHO05D000137 1.5e-09 66.2 64 46.9
Peaxi162Scf00237g00177 Petunia axillaris HOM05D000679 ORTHO05D000137 1.5e-09 66.2 75 42.7
CANSAT35G0046 Cannabis sativa HOM05D000679 ORTHO05D000137 1.9e-09 65.9 64 46.9
CAN.G1139.12 Capsicum annuum HOM05D009195 ORTHO05D000137 2.5e-09 65.5 61 45.9
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 2.5e-09 65.5 73 43.8
CAN.G58.24 Capsicum annuum HOM05D009195 ORTHO05D000137 3.3e-09 65.1 82 39.0
CAN.G977.6 Capsicum annuum HOM05D009195 ORTHO05D000137 4.3e-09 64.7 83 38.6
Nitab4.5_0027154g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.3e-09 64.7 65 47.7
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 5.6e-09 64.3 63 47.6
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 5.6e-09 64.3 73 43.8
Nitab4.5_0000105g0460 Nicotiana tabacum HOM05D000033 ORTHO05D012242 7.3e-09 63.9 34 79.4
Nitab4.5_0003770g0060 Nicotiana tabacum HOM05D002262 ORTHO05D000137 7.3e-09 63.9 82 37.8
CANSAT78G1843 Cannabis sativa HOM05D008721 ORTHO05D000137 9.6e-09 63.5 64 46.9
CAN.G998.1 Capsicum annuum HOM05D009195 ORTHO05D000137 9.6e-09 63.5 80 41.2
Nitab4.5_0014640g0020 Nicotiana tabacum HOM05D005877 ORTHO05D010356 1.3e-08 63.2 75 42.7
CAN.G1568.2 Capsicum annuum HOM05D009195 ORTHO05D000137 1.6e-08 62.8 61 41.0
CANSAT01G0053 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-08 62.4 59 49.2
CANSAT01G0402 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-08 62.4 59 49.2
CANSAT25G0186 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-08 62.4 59 49.2
CANSAT25G3447 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-08 62.4 59 49.2
CANSAT35G1851 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-08 62.4 59 49.2
CANSAT56G1525 Cannabis sativa HOM05D008636 ORTHO05D000137 2.1e-08 62.4 59 49.2
CAN.G242.13 Capsicum annuum HOM05D009195 ORTHO05D000137 2.1e-08 62.4 70 40.0
Nitab4.5_0003261g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.1e-08 62.4 67 47.8
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 2.1e-08 62.4 73 42.5
Nitab4.5_0000011g0230 Nicotiana tabacum HOM05D006812 ORTHO05D000482 2.8e-08 62.0 67 47.8
Nitab4.5_0011716g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.8e-08 62.0 97 37.1
CANSAT25G1221 Cannabis sativa HOM05D008636 ORTHO05D000137 3.6e-08 61.6 59 49.2
CAN.G139.5 Capsicum annuum HOM05D009195 ORTHO05D000137 4.8e-08 61.2 81 38.3
Nitab4.5_0000832g0150 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.8e-08 61.2 70 41.4
Nitab4.5_0001684g0060 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.2e-08 60.8 74 41.9
Sopen09g020240 Solanum pennellii HOM05D010988 ORTHO05D000137 6.2e-08 60.8 73 41.1
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.4e-07 59.7 97 35.1
Nitab4.5_0009150g0060 Nicotiana tabacum HOM05D006812 ORTHO05D000137 1.4e-07 59.7 41 70.7
Peaxi162Scf00346g00514 Petunia axillaris HOM05D002262 ORTHO05D000137 1.4e-07 59.7 80 37.5
CAN.G326.5 Capsicum annuum HOM05D009195 ORTHO05D016873 1.8e-07 59.3 62 45.2
Nitab4.5_0000026g0260 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.8e-07 59.3 76 40.8
SGA_v2.0_scaffold1G00046 Striga asiatica HOM05D000679 ORTHO05D000137 1.8e-07 59.3 70 40.0
Nitab4.5_0000210g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.4e-07 58.9 83 37.3
Nitab4.5_0000383g0370 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.4e-07 58.9 83 37.3
Nitab4.5_0000665g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.4e-07 58.9 93 35.5
Nitab4.5_0003392g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.4e-07 58.9 87 39.1
Nitab4.5_0003533g0090 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.4e-07 58.9 83 36.1
Nitab4.5_0000725g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.1e-07 58.5 77 39.0
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.1e-07 58.5 83 36.1
Nitab4.5_0006617g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000137 3.1e-07 58.5 61 44.3
CAN.G1071.1 Capsicum annuum HOM05D009195 ORTHO05D000137 4.0e-07 58.2 80 36.2
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.0e-07 58.2 68 41.2
Nitab4.5_0002432g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.0e-07 58.2 69 42.0
Nitab4.5_0028280g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 4.0e-07 58.2 69 44.9
Nitab4.5_0013025g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.3e-07 57.8 83 36.1
Nitab4.5_0024925g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 5.3e-07 57.8 33 72.7
Nitab4.5_0008288g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.9e-07 57.4 83 33.7
Nitab4.5_0010874g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.9e-07 57.4 86 36.0
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 6.9e-07 57.4 73 39.7
Nitab4.5_0000902g0220 Nicotiana tabacum HOM05D002262 ORTHO05D000137 9.0e-07 57.0 70 41.4
Nitab4.5_0006179g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.0e-07 57.0 83 37.3
Nitab4.5_0015150g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.0e-07 57.0 83 36.1
CANSAT21G0858 Cannabis sativa HOM05D008721 ORTHO05D000137 1.2e-06 56.6 82 37.8
CANSAT56G3453 Cannabis sativa HOM05D008636 ORTHO05D000137 1.2e-06 56.6 77 40.3
CAN.G1801.7 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-06 56.6 50 48.0
CAN.G314.7 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-06 56.6 75 42.7
CAN.G50.5 Capsicum annuum HOM05D009195 ORTHO05D000137 1.2e-06 56.6 80 36.2
Nitab4.5_0000440g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-06 56.6 72 37.5
Nitab4.5_0001614g0170 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.2e-06 56.6 69 39.1
Nitab4.5_0018223g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.2e-06 56.6 69 39.1
Nitab4.5_0026057g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.2e-06 56.6 83 36.1
PGSC0003DMG400009651 Solanum tuberosum HOM05D002262 ORTHO05D000482 1.2e-06 56.6 72 40.3
CAN.G1469.2 Capsicum annuum HOM05D002262 ORTHO05D000137 1.5e-06 56.2 59 44.1
Nitab4.5_0009017g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.5e-06 56.2 83 36.1
CANSAT35G0233 Cannabis sativa HOM05D008636 ORTHO05D000137 2.0e-06 55.8 59 45.8
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.0e-06 55.8 70 41.4
Nitab4.5_0002002g0130 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.0e-06 55.8 47 59.6
Nitab4.5_0002052g0050 Nicotiana tabacum HOM05D002262 ORTHO05D000137 2.0e-06 55.8 66 42.4
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.0e-06 55.8 83 34.9
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 2.6e-06 55.5 90 33.3
CAN.G1282.6 Capsicum annuum HOM05D000679 ORTHO05D000137 2.6e-06 55.5 84 35.7
Nitab4.5_0000617g0130 Nicotiana tabacum HOM05D006812 ORTHO05D012242 2.6e-06 55.5 46 63.0
Nitab4.5_0001300g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.6e-06 55.5 98 32.7
Nitab4.5_0001816g0180 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.6e-06 55.5 84 36.9
Nitab4.5_0004979g0150 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.6e-06 55.5 83 33.7
Nitab4.5_0000912g0090 Nicotiana tabacum HOM05D006812 ORTHO05D000482 3.4e-06 55.1 42 57.1
Nitab4.5_0016899g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-06 55.1 68 39.7
Solyc09g020160.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.4e-06 55.1 91 31.9
Sopen10g022330 Solanum pennellii HOM05D000004 ORTHO05D000002 3.4e-06 55.1 49 46.9
PGSC0003DMG400046473 Solanum tuberosum HOM05D019551 ORTHO05D020328 3.4e-06 55.1 72 38.9
Nitab4.5_0002755g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 4.4e-06 54.7 83 34.9
Sopen10g014500 Solanum pennellii HOM05D000541 ORTHO05D010105 4.4e-06 54.7 73 38.4
CANSAT21G0896 Cannabis sativa HOM05D008636 ORTHO05D000137 5.8e-06 54.3 59 45.8
CANSAT35G0235 Cannabis sativa HOM05D008636 ORTHO05D000137 5.8e-06 54.3 59 45.8
CAN.G1524.9 Capsicum annuum HOM05D000541 ORTHO05D000137 5.8e-06 54.3 66 37.9
CAN.G649.11 Capsicum annuum HOM05D000679 ORTHO05D000137 5.8e-06 54.3 95 30.5
Nitab4.5_0000044g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.8e-06 54.3 83 33.7
Nitab4.5_0008791g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.8e-06 54.3 81 35.8
Nitab4.5_0010319g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.8e-06 54.3 80 35.0
Nitab4.5_0013951g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 5.8e-06 54.3 83 36.1
Nitab4.5_0001446g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.6e-06 53.9 83 34.9
Nitab4.5_0002397g0030 Nicotiana tabacum HOM05D006812 ORTHO05D000137 7.6e-06 53.9 60 53.3
Nitab4.5_0006099g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.6e-06 53.9 83 36.1
Nitab4.5_0008756g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.6e-06 53.9 104 30.8
Nitab4.5_0026672g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.6e-06 53.9 75 34.7
SGA_v2.0_scaffold160G37744 Striga asiatica HOM05D002262 ORTHO05D000137 7.6e-06 53.9 87 35.6
Nitab4.5_0001299g0110 Nicotiana tabacum HOM05D002262 ORTHO05D000482 9.9e-06 53.5 75 36.0
Nitab4.5_0004037g0060 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.9e-06 53.5 87 36.8
Nitab4.5_0004192g0010 Nicotiana tabacum HOM05D006812 ORTHO05D000482 9.9e-06 53.5 41 65.9
Solyc08g044337.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 9.9e-06 53.5 74 35.1
Sopen05g027230 Solanum pennellii HOM05D000002 ORTHO05D000001 9.9e-06 53.5 74 35.1
Sopen06g003040 Solanum pennellii HOM05D000679 ORTHO05D000137 9.9e-06 53.5 74 35.1
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 9.9e-06 53.5 74 35.1
Sopen12g007430 Solanum pennellii HOM05D000679 ORTHO05D000137 9.9e-06 53.5 74 35.1


User provided reference genes

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