Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000078g0030 Nicotiana tabacum HOM05D005104 ORTHO05D006614 4.2e-120 434.9 246 100.0
PGSC0003DMG400017693 Solanum tuberosum HOM05D005104 ORTHO05D006614 2.5e-64 249.6 251 63.3
Sopen10g017460 Solanum pennellii HOM05D005104 ORTHO05D006614 9.5e-64 247.7 251 62.9
Solyc10g047220.2 Solanum lycopersicum HOM05D005104 ORTHO05D006614 4.7e-63 245.4 251 66.1
Peaxi162Scf00003g03543 Petunia axillaris HOM05D005104 ORTHO05D006614 7.8e-58 228.0 251 64.1
Nitab4.5_0005015g0050 Nicotiana tabacum HOM05D005104 ORTHO05D006614 1.1e-56 224.2 172 83.1
MSTRG.27791 Avicennia marina HOM05D005104 ORTHO05D006614 9.8e-45 184.5 256 49.2
CAN.G1.36 Capsicum annuum HOM05D005104 ORTHO05D006614 5.4e-43 178.7 164 70.1
Dinv24198 Davidia involucrata HOM05D005104 ORTHO05D006614 6.0e-42 175.3 265 48.7
Migut.N01063 Erythranthe guttata HOM05D005104 ORTHO05D006614 3.0e-41 172.9 249 48.2
Cc02_g21630 Coffea canephora HOM05D005104 ORTHO05D006614 5.1e-41 172.2 207 54.1
Oeu007957.1 Olea europaea HOM05D005104 ORTHO05D006614 5.1e-41 172.2 258 48.4
Eucgr.I02668 Eucalyptus grandis HOM05D005104 ORTHO05D006614 1.5e-40 170.6 253 48.2
CSS0037720 Camellia sinensis var. sinensis HOM05D005104 ORTHO05D006614 3.6e-39 166.0 221 50.2
SalBow6G6009 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.1e-39 164.9 258 46.1
SalBow6G6298 Salvia bowleyana HOM05D005104 ORTHO05D006614 8.1e-39 164.9 258 46.1
Actinidia28058 Actinidia chinensis HOM05D005104 ORTHO05D006614 1.4e-38 164.1 262 45.0
Hund06391 Selenicereus undatus HOM05D005104 ORTHO05D006614 8.9e-38 161.4 238 47.1
Manes.14G166400 Manihot esculenta HOM05D005104 ORTHO05D006614 1.5e-37 160.6 262 47.3
SGA_v2.0_scaffold45G17311 Striga asiatica HOM05D005104 ORTHO05D006614 4.4e-37 159.1 262 48.1
Lsat_1_v5_gn_5_107140 Lactuca sativa HOM05D005104 ORTHO05D006614 1.7e-36 157.1 253 51.0
Phvul.002G208000 Phaseolus vulgaris HOM05D005104 ORTHO05D006614 2.9e-36 156.4 267 46.1
HanXRQChr10g0295831 Helianthus annuus HOM05D005104 ORTHO05D006614 8.4e-36 154.8 257 47.9
AUR62013112 Chenopodium quinoa HOM05D005104 ORTHO05D006614 3.2e-35 152.9 189 50.8
Nn1g05321 Nelumbo nucifera HOM05D005104 ORTHO05D006614 5.4e-35 152.1 259 49.8
AUR62010117 Chenopodium quinoa HOM05D005104 ORTHO05D006614 7.1e-35 151.8 192 50.5
PGR142G2776 Punica granatum HOM05D005104 ORTHO05D006614 9.2e-35 151.4 252 46.4
TWI59G0245 Tripterygium wilfordii HOM05D005104 ORTHO05D006614 2.7e-34 149.8 256 43.0
Glyma.05G118400 Glycine max HOM05D005104 ORTHO05D006614 3.5e-34 149.4 262 50.0
Glyma.08G073500 Glycine max HOM05D005104 ORTHO05D006614 6.0e-34 148.7 268 50.7
RcHm_v2.0_Chr6g0273461 Rosa chinensis HOM05D005104 ORTHO05D006614 7.8e-34 148.3 251 51.4
TAR628G1132 Trochodendron aralioides HOM05D005104 ORTHO05D006614 1.0e-33 147.9 261 44.1
PSO781G0266 Papaver somniferum HOM05D005104 ORTHO05D006614 1.3e-33 147.5 268 42.2
VMungo0251G0802 Vigna mungo HOM05D005104 ORTHO05D006614 1.3e-33 147.5 257 44.0
Lj4g0020611 Lotus japonicus HOM05D005104 ORTHO05D006614 1.7e-33 147.1 212 49.1
Psat7g098720 Pisum sativum HOM05D005104 ORTHO05D006614 1.7e-33 147.1 260 43.5
GSVIVG01003083001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.7e-33 147.1 260 44.2
CANSAT11G2657 Cannabis sativa HOM05D005104 ORTHO05D006614 2.3e-33 146.7 212 49.1
arahy.Tifrunner.gnm1.ann1.V9NXIE Arachis hypogaea HOM05D005104 ORTHO05D006614 3.9e-33 146.0 264 47.7
Duzib248G0158 Durio zibethinus HOM05D005104 ORTHO05D006614 3.9e-33 146.0 261 42.9
Cfa005608 Carpinus fangiana HOM05D005104 ORTHO05D006614 5.1e-33 145.6 212 50.0
ECA234G0341 Erigeron canadensis HOM05D005104 ORTHO05D006614 5.1e-33 145.6 215 47.4
Thecc.02G140100 Theobroma cacao HOM05D005104 ORTHO05D006614 5.1e-33 145.6 262 49.2
vmacro19925 Vaccinium macrocarpon HOM05D005104 ORTHO05D006614 6.6e-33 145.2 289 48.1
arahy.Tifrunner.gnm1.ann1.PH7E5N Arachis hypogaea HOM05D005104 ORTHO05D006614 2.5e-32 143.3 264 48.1
CiPaw.05G036500 Carya illinoinensis HOM05D005104 ORTHO05D006614 2.5e-32 143.3 266 48.1
Haze_10684 Corylus avellana HOM05D005104 ORTHO05D006614 3.3e-32 142.9 256 51.2
Atru.chr6.1109 Acer truncatum HOM05D005104 ORTHO05D006614 4.3e-32 142.5 251 51.4
TPR.G10460 Trifolium pratense HOM05D005104 ORTHO05D006614 4.3e-32 142.5 208 47.6
Ca_18345_v3 Cicer arietinum L. HOM05D005104 ORTHO05D006614 5.6e-32 142.1 278 40.6
FvH4_2g12710 Fragaria vesca HOM05D005104 ORTHO05D006614 7.3e-32 141.7 201 48.8
FAN27G3119 Fragaria x ananassa HOM05D005104 ORTHO05D006614 7.3e-32 141.7 249 47.0
Ah.01g009520 Amaranthus hybridus HOM05D005104 ORTHO05D006614 9.6e-32 141.4 224 45.1
Aqoxy6G00597 Aquilegia oxysepala HOM05D005104 ORTHO05D006614 9.6e-32 141.4 270 47.8
Lalb_Chr10g0097741 Lupinus albus HOM05D005104 ORTHO05D006614 9.6e-32 141.4 259 49.8
Hma1.2p1_0522F.1_g171600 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.2e-31 141.0 214 46.3
Prupe.8G062400 Prunus persica HOM05D005104 ORTHO05D006614 1.2e-31 141.0 264 51.9
Atru.chr6.1089 Acer truncatum HOM05D005104 ORTHO05D006614 1.6e-31 140.6 202 49.0
Gohir.A04G113100 Gossypium hirsutum HOM05D005104 ORTHO05D006614 1.6e-31 140.6 263 45.2
Medtr4g094252 Medicago truncatula HOM05D005104 ORTHO05D006614 2.1e-31 140.2 256 42.6
QL11p020542 Quercus lobata HOM05D005104 ORTHO05D006614 2.1e-31 140.2 271 47.6
Gohir.A04G112960 Gossypium hirsutum HOM05D005104 ORTHO05D006614 3.6e-31 139.4 210 45.7
PSO541G4381 Papaver somniferum HOM05D005104 ORTHO05D006614 4.7e-31 139.0 268 40.7
COL.COLO4_20953 Corchorus olitorius HOM05D005104 ORTHO05D006614 1.1e-30 137.9 261 44.1
MD10G1051500 Malus domestica HOM05D005104 ORTHO05D006614 1.1e-30 137.9 257 51.4
MELO3C018651.2 Cucumis melo HOM05D005104 ORTHO05D006614 1.4e-30 137.5 259 44.0
Sed0008592 Sechium edule HOM05D005104 ORTHO05D006614 1.8e-30 137.1 257 49.4
CsaV3_7G006430 Cucumis sativus L. HOM05D005104 ORTHO05D006614 2.4e-30 136.7 264 42.8
Gohir.D04G154400 Gossypium hirsutum HOM05D005104 ORTHO05D006614 2.4e-30 136.7 261 45.6
Gorai.012G141700 Gossypium raimondii HOM05D005104 ORTHO05D006614 2.4e-30 136.7 261 45.6
ClCG09G015340 Citrullus lanatus HOM05D005104 ORTHO05D006614 3.1e-30 136.3 270 42.6
FAN20G1981 Fragaria x ananassa HOM05D005104 ORTHO05D006614 3.1e-30 136.3 201 47.8
HPP92_006000 Vanilla planifolia HOM05D005104 ORTHO05D006614 7.6e-29 131.7 202 45.0
CDE10G0587 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 3.8e-28 129.4 257 39.7
Potri.003G023601 Populus trichocarpa HOM05D005104 ORTHO05D006614 3.8e-28 129.4 257 49.0
Ciclev10029197m.g Citrus clementina HOM05D005104 ORTHO05D006614 4.9e-28 129.0 201 44.8
DCAR_001791 Daucus carota HOM05D005104 ORTHO05D006614 8.4e-28 128.3 262 40.5
ATR0564G397 Amborella trichopoda HOM05D005104 ORTHO05D006614 2.4e-27 126.7 257 41.6
Oeu026158.1 Olea europaea HOM05D005104 ORTHO05D006614 1.2e-26 124.4 192 50.5
AT5G64160 Arabidopsis thaliana HOM05D005104 ORTHO05D006614 4.6e-26 122.5 245 40.0
CARHR278070 Cardamine hirsuta HOM05D005104 ORTHO05D006614 4.6e-26 122.5 245 40.4
Rhsim05G0108500 Rhododendron simsii HOM05D005104 ORTHO05D006614 4.6e-26 122.5 197 43.7
Thhalv10004872m.g Eutrema salsugineum HOM05D005104 ORTHO05D006614 7.8e-26 121.7 245 41.2
Sp2g27220 Schrenkiella parvula HOM05D005104 ORTHO05D006614 7.8e-26 121.7 244 41.8
Carub.0008s2495 Capsella rubella HOM05D005104 ORTHO05D006614 1.0e-25 121.3 246 39.0
SEGI_35517 Sequoiadendron giganteum HOM05D005104 ORTHO05D006614 1.7e-25 120.6 266 38.7
A06p30880 Brassica napus HOM05D005104 ORTHO05D006614 3.0e-25 119.8 246 46.3
AL8G41430 Arabidopsis lyrata HOM05D005104 ORTHO05D006614 1.1e-24 117.9 242 39.3
BcaB07g29727 Brassica carinata HOM05D005104 ORTHO05D006614 3.3e-24 116.3 246 39.4
BcaB02g09781 Brassica carinata HOM05D005104 ORTHO05D006614 5.6e-24 115.5 244 41.8
C09p58340 Brassica napus HOM05D005104 ORTHO05D006614 7.3e-24 115.2 204 42.2
BolC3t18470H Brassica oleracea HOM05D005104 ORTHO05D006614 7.3e-24 115.2 246 45.1
BolC9t58698H Brassica oleracea HOM05D005104 ORTHO05D006614 7.3e-24 115.2 204 42.2
BcaC08g45071 Brassica carinata HOM05D005104 ORTHO05D006614 9.6e-24 114.8 189 41.8
C03p62090 Brassica napus HOM05D005104 ORTHO05D006614 9.6e-24 114.8 246 45.1
C06p26800 Brassica napus HOM05D005104 ORTHO05D006614 9.6e-24 114.8 189 42.9
C09p58390 Brassica napus HOM05D005104 ORTHO05D006614 1.6e-23 114.0 204 42.6
BcaC01g02673 Brassica carinata HOM05D005104 ORTHO05D006614 2.1e-23 113.6 246 45.1
BcaC02g09479 Brassica carinata HOM05D002012 ORTHO05D001992 2.1e-23 113.6 189 43.9
C02p46090 Brassica napus HOM05D005104 ORTHO05D006614 2.1e-23 113.6 190 44.7
BolC6t37855H Brassica oleracea HOM05D005104 ORTHO05D006614 2.1e-23 113.6 189 41.3
Cpa.g.sc42.74 Carica papaya HOM05D005104 ORTHO05D006614 2.1e-23 113.6 269 38.7
unitig_22.g6836 Utricularia gibba HOM05D001058 ORTHO05D000911 2.8e-23 113.2 163 46.0
Os02g0753200 Oryza sativa ssp. japonica HOM05D005104 ORTHO05D006614 1.1e-22 111.3 190 44.7
Hma1.2p1_0522F.1_g171590 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 1.2e-21 107.8 179 44.7
FAN24G3378 Fragaria x ananassa HOM05D005104 ORTHO05D006614 1.3e-20 104.4 130 54.6
Sabra01G0157800 Salix brachista HOM05D005104 ORTHO05D006614 1.3e-20 104.4 277 41.9
GSVIVG01003087001 Vitis vinifera HOM05D005104 ORTHO05D006614 2.2e-20 103.6 138 51.4
Aa31LG1G17770 Aethionema arabicum HOM05D005104 ORTHO05D006614 3.8e-20 102.8 257 36.2
BraA03t13815Z Brassica rapa HOM05D005104 ORTHO05D006614 3.8e-20 102.8 186 41.4
GSVIVG01013334001 Vitis vinifera HOM05D005104 ORTHO05D006614 6.4e-20 102.1 138 50.7
Lj5A240T40 Lonicera japonica HOM05D005104 ORTHO05D006614 1.4e-19 100.9 136 50.7
Sc08g0003350 Simmondsia chinensis HOM05D005104 ORTHO05D006614 9.3e-19 98.2 115 55.7
Zm00001eb194200 Zea mays HOM05D005104 ORTHO05D006614 1.0e-17 94.7 193 39.4
Zm00001eb255190 Zea mays HOM05D005104 ORTHO05D006614 3.0e-17 93.2 259 35.5
MBI02_g08741_MAGBIO Magnolia biondii HOM05D005104 ORTHO05D006614 1.1e-16 91.3 135 48.1
Mapoly0096s0033 Marchantia polymorpha HOM05D005104 ORTHO05D006614 1.5e-16 90.9 204 38.2
EL10Ac9g21465 Beta vulgaris HOM05D005104 ORTHO05D006614 2.4e-14 83.6 217 42.4
Pp3c18_21190 Physcomitrium patens HOM05D005104 ORTHO05D006614 1.2e-13 81.3 250 32.0
SMO117G0229 Selaginella moellendorffii HOM05D005104 ORTHO05D006614 2.2e-12 77.0 189 36.0
THA.LOC104818435 Tarenaya hassleriana HOM05D005104 ORTHO05D006614 2.2e-12 77.0 150 39.3
GSVIVG01003093001 Vitis vinifera HOM05D005104 ORTHO05D006614 1.1e-11 74.7 121 45.5
CDE10G1356 Ceratophyllum demersum HOM05D005104 ORTHO05D006614 1.4e-11 74.3 174 35.6
AagrBONN_evm.TU.Sc2ySwM_117.984 Anthoceros agrestis HOM05D005104 ORTHO05D006614 1.2e-10 71.2 188 33.0
Hma1.2p1_0516F.1_g170490 Hydrangea macrophylla HOM05D005104 ORTHO05D006614 4.6e-10 69.3 113 41.6
EL10Ac9g21466 Beta vulgaris HOM05D005104 ORTHO05D006614 6.0e-10 68.9 39 87.2
BolC4t25904H Brassica oleracea HOM05D005104 ORTHO05D006614 1.9e-08 63.9 50 70.0
Duzib132G1169 Durio zibethinus HOM05D005104 ORTHO05D006614 2.5e-08 63.5 141 39.0
C03p52730 Brassica napus HOM05D005104 ORTHO05D021970 1.3e-07 61.2 112 40.2
C07p45690 Brassica napus HOM05D005104 ORTHO05D021970 4.8e-07 59.3 109 38.5
C05p26840 Brassica napus HOM05D005104 ORTHO05D006614 6.2e-07 58.9 109 37.6
Cre12.g509300 Chlamydomonas reinhardtii HOM05D005104 ORTHO05D006614 2.4e-06 57.0 202 28.7
C09p03790 Brassica napus HOM05D005104 ORTHO05D006614 3.1e-06 56.6 109 36.7
A02p26040 Brassica napus HOM05D005104 ORTHO05D006614 4.0e-06 56.2 91 38.5


User provided reference genes

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