Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000077g0040 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.9e-105 384.8 194 100.0
Nitab4.5_0000500g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.0e-36 156.0 190 47.9
Nitab4.5_0000553g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.9e-35 153.3 194 43.3
Nitab4.5_0004407g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 2.5e-35 152.9 186 46.8
Nitab4.5_0001109g0050 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.1e-34 149.8 186 47.8
Nitab4.5_0021924g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.8e-33 146.7 185 43.2
Nitab4.5_0011972g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 6.8e-33 144.8 187 43.3
Nitab4.5_0010898g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.8e-32 141.0 184 45.1
Nitab4.5_0001724g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.1e-30 137.5 185 49.2
Nitab4.5_0000013g0160 Nicotiana tabacum HOM05D008108 ORTHO05D011004 4.1e-30 135.6 173 48.6
Nitab4.5_0006538g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 6.2e-26 121.7 132 55.3
Nitab4.5_0009593g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.9e-25 117.9 173 41.0
Nitab4.5_0009415g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.2e-24 117.5 185 36.2
Nitab4.5_0010466g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.2e-24 117.5 181 39.8
Nitab4.5_0001914g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.4e-23 111.3 150 47.3
Nitab4.5_0003201g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 1.6e-21 107.1 186 37.6
Nitab4.5_0000001g0300 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.5e-19 100.5 69 71.0
Nitab4.5_0007365g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.6e-18 97.1 187 39.6
Nitab4.5_0000384g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.1e-18 94.7 159 42.8
Nitab4.5_0000001g0290 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.1e-17 94.4 111 55.0
Nitab4.5_0003134g0170 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.8e-16 88.6 86 53.5
Nitab4.5_0003250g0070 Nicotiana tabacum HOM05D000060 ORTHO05D000434 7.6e-16 88.2 159 37.1
Nitab4.5_0000253g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.8e-15 85.9 52 84.6
Nitab4.5_0009434g0020 Nicotiana tabacum HOM05D008108 ORTHO05D011004 3.8e-15 85.9 138 39.9
Nitab4.5_0000409g0050 Nicotiana tabacum HOM05D008108 ORTHO05D011004 6.4e-15 85.1 99 45.5
Nitab4.5_0001024g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.4e-15 84.7 186 37.1
Nitab4.5_0005190g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000482 1.1e-14 84.3 152 36.8
Nitab4.5_0003250g0060 Nicotiana tabacum HOM05D000455 ORTHO05D000434 1.9e-14 83.6 186 36.0
Nitab4.5_0003401g0070 Nicotiana tabacum HOM05D008108 ORTHO05D000137 1.6e-13 80.5 186 33.9
Nitab4.5_0002000g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 5.1e-12 75.5 124 40.3
Nitab4.5_0003261g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000482 3.6e-10 69.3 70 54.3
Nitab4.5_0000409g0030 Nicotiana tabacum HOM05D008108 ORTHO05D011004 8.1e-10 68.2 55 63.6
Nitab4.5_0000236g0100 Nicotiana tabacum HOM05D008108 ORTHO05D286423 1.1e-09 67.8 53 58.5
Nitab4.5_0005377g0070 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.8e-09 67.0 40 80.0
Nitab4.5_0005641g0040 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.3e-09 65.5 86 38.4
Nitab4.5_0000646g0230 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.2e-08 64.3 95 35.8
Nitab4.5_0024778g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 3.4e-08 62.8 89 36.0
Nitab4.5_0001889g0010 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.5e-08 62.4 170 29.4
Nitab4.5_0000839g0190 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.3e-07 60.8 87 33.3
Nitab4.5_0000022g0130 Nicotiana tabacum HOM05D002262 ORTHO05D000482 1.7e-07 60.5 40 75.0
Nitab4.5_0002414g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 1.7e-07 60.5 88 35.2
Nitab4.5_0001472g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.2e-07 60.1 95 40.0
Nitab4.5_0003824g0010 Nicotiana tabacum HOM05D008108 ORTHO05D011004 2.2e-07 60.1 55 50.9
Nitab4.5_0000114g0050 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.8e-07 59.3 122 35.2
Nitab4.5_0000034g0070 Nicotiana tabacum HOM05D002262 ORTHO05D000137 4.9e-07 58.9 84 35.7
Nitab4.5_0006819g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-06 57.8 178 30.3
Nitab4.5_0001730g0180 Nicotiana tabacum HOM05D008108 ORTHO05D011004 1.4e-06 57.4 46 58.7
Nitab4.5_0009434g0010 Nicotiana tabacum HOM05D008108 ORTHO05D000137 3.2e-06 56.2 43 53.5
Nitab4.5_0000104g0270 Nicotiana tabacum HOM05D008108 ORTHO05D011004 4.2e-06 55.8 184 27.7
Nitab4.5_0006538g0040 Nicotiana tabacum HOM05D008108 ORTHO05D011004 4.2e-06 55.8 36 66.7
Nitab4.5_0008561g0020 Nicotiana tabacum HOM05D002262 ORTHO05D000137 5.4e-06 55.5 85 32.9
CANSAT25G3227 Cannabis sativa HOM05D008721 ORTHO05D000137 9.3e-06 54.7 97 33.0
CANSAT56G1504 Cannabis sativa HOM05D000679 ORTHO05D000137 9.3e-06 54.7 97 33.0
Nitab4.5_0000434g0030 Nicotiana tabacum HOM05D008108 ORTHO05D000137 9.3e-06 54.7 42 54.8
Nitab4.5_0000457g0260 Nicotiana tabacum HOM05D000679 ORTHO05D000137 9.3e-06 54.7 89 40.4


User provided reference genes

Program Settings