Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000077g0020 Nicotiana tabacum HOM05D000265 ORTHO05D016910 2.1e-113 412.5 236 100.0
Nitab4.5_0002686g0010 Nicotiana tabacum HOM05D000265 ORTHO05D000161 1.4e-85 320.1 255 78.4
Sopen01g003070 Solanum pennellii HOM05D000265 ORTHO05D000161 3.7e-33 146.0 204 46.6
Peaxi162Scf00086g00178 Petunia axillaris HOM05D000265 ORTHO05D000161 5.4e-32 142.1 178 47.8
Solyc01g007090.1 Solanum lycopersicum HOM05D000265 ORTHO05D000161 5.4e-32 142.1 204 45.1
PGSC0003DMG400036570 Solanum tuberosum HOM05D000265 ORTHO05D000161 2.7e-31 139.8 225 43.1
CAN.G574.9 Capsicum annuum HOM05D000265 ORTHO05D000161 1.3e-30 137.5 203 41.9
CAN.G574.14 Capsicum annuum HOM05D000265 ORTHO05D000161 6.6e-30 135.2 199 43.7
PGSC0003DMG400037538 Solanum tuberosum HOM05D000265 ORTHO05D000161 1.9e-29 133.7 225 41.3
CAN.G574.13 Capsicum annuum HOM05D000265 ORTHO05D000161 2.5e-29 133.3 199 48.7
CAN.G574.12 Capsicum annuum HOM05D000265 ORTHO05D000161 9.8e-26 121.3 138 49.3
CAN.G574.11 Capsicum annuum HOM05D000265 ORTHO05D001422 8.3e-25 118.2 148 44.6
Nitab4.5_0017141g0010 Nicotiana tabacum HOM05D000265 ORTHO05D000161 7.3e-21 105.1 122 50.8
Nitab4.5_0005513g0010 Nicotiana tabacum HOM05D000265 ORTHO05D000161 8.1e-20 101.7 134 49.3
Peaxi162Scf00211g00411 Petunia axillaris HOM05D000265 ORTHO05D000161 1.8e-19 100.5 149 42.3
PGSC0003DMG400028146 Solanum tuberosum HOM05D000265 ORTHO05D000161 2.6e-18 96.7 145 42.8
Sopen10g032400 Solanum pennellii HOM05D000265 ORTHO05D000161 6.4e-17 92.0 145 42.1
Solyc10g081890.2 Solanum lycopersicum HOM05D000265 ORTHO05D000161 8.3e-17 91.7 144 43.1
Nitab4.5_0000384g0060 Nicotiana tabacum HOM05D000265 ORTHO05D000161 4.1e-16 89.4 166 47.6
CAN.G674.1 Capsicum annuum HOM05D000265 ORTHO05D000161 6.0e-15 85.5 126 42.1
Nitab4.5_0000077g0030 Nicotiana tabacum HOM05D000265 ORTHO05D000161 6.6e-14 82.0 183 43.2
COL.COLO4_29571 Corchorus olitorius HOM05D000265 ORTHO05D000161 8.6e-14 81.6 124 42.7
Gorai.006G149200 Gossypium raimondii HOM05D000265 ORTHO05D000161 1.1e-13 81.3 127 41.7
Cfa020031 Carpinus fangiana HOM05D000265 ORTHO05D000161 1.9e-13 80.5 131 40.5
Gohir.D04G091300 Gossypium hirsutum HOM05D000265 ORTHO05D000161 2.5e-13 80.1 132 39.4
Gorai.009G397200 Gossypium raimondii HOM05D000265 ORTHO05D000161 2.5e-13 80.1 132 39.4
Gohir.A09G134000 Gossypium hirsutum HOM05D000265 ORTHO05D000161 5.6e-13 79.0 127 40.9
Gohir.D09G130400 Gossypium hirsutum HOM05D000265 ORTHO05D000161 5.6e-13 79.0 127 40.9
Haze_20182 Corylus avellana HOM05D000265 ORTHO05D000161 7.3e-13 78.6 141 37.6
CsaV3_6G041130 Cucumis sativus L. HOM05D000265 ORTHO05D000161 9.5e-13 78.2 125 41.6
MELO3C024588.2 Cucumis melo HOM05D000265 ORTHO05D000161 1.2e-12 77.8 130 40.8
Gohir.A04G057900 Gossypium hirsutum HOM05D000265 ORTHO05D000161 1.2e-12 77.8 132 37.9
Manes.08G033800 Manihot esculenta HOM05D000265 ORTHO05D000161 1.2e-12 77.8 124 41.1
PGR142G0943 Punica granatum HOM05D000265 ORTHO05D000161 2.8e-12 76.6 121 41.3
MELO3C009541.2 Cucumis melo HOM05D000265 ORTHO05D000161 8.1e-12 75.1 110 40.0
Sed0023191 Sechium edule HOM05D000265 ORTHO05D000161 1.8e-11 73.9 145 37.2
Thecc.05G104800 Theobroma cacao HOM05D000265 ORTHO05D000161 2.3e-11 73.6 123 43.9
Lj1C1053G6 Lonicera japonica HOM05D000265 ORTHO05D000161 3.1e-11 73.2 129 39.5
Duzib093G1323 Durio zibethinus HOM05D000265 ORTHO05D000161 4.0e-11 72.8 123 43.1
Potri.016G070100 Populus trichocarpa HOM05D000265 ORTHO05D000161 5.2e-11 72.4 130 38.5
RcHm_v2.0_Chr3g0475951 Rosa chinensis HOM05D000265 ORTHO05D000161 5.2e-11 72.4 111 36.9
Oeu045045.1 Olea europaea HOM05D000265 ORTHO05D000161 6.8e-11 72.0 121 38.8
Potri.006G203100 Populus trichocarpa HOM05D000265 ORTHO05D000161 6.8e-11 72.0 130 37.7
Lj1g0006008 Lotus japonicus HOM05D000265 ORTHO05D000161 8.9e-11 71.6 146 36.3
Nn2g14312 Nelumbo nucifera HOM05D000265 ORTHO05D000161 8.9e-11 71.6 139 38.8
Carub.0003s1101 Capsella rubella HOM05D000265 ORTHO05D000161 1.2e-10 71.2 114 36.8
CsaV3_3G037990 Cucumis sativus L. HOM05D000265 ORTHO05D000161 1.2e-10 71.2 154 31.2
Sed0020281 Sechium edule HOM05D000265 ORTHO05D000161 1.5e-10 70.9 149 36.2
Dinv31761 Davidia involucrata HOM05D000265 ORTHO05D000161 2.0e-10 70.5 106 39.6
MD14G1039500 Malus domestica HOM05D000265 ORTHO05D000161 2.0e-10 70.5 128 39.8
Nn6g34686 Nelumbo nucifera HOM05D000265 ORTHO05D000161 2.0e-10 70.5 139 37.4
CAN.G574.6 Capsicum annuum HOM05D000265 ORTHO05D000161 2.6e-10 70.1 172 34.9
MD12G1040500 Malus domestica HOM05D000265 ORTHO05D000161 2.6e-10 70.1 111 39.6
AL3G23240 Arabidopsis lyrata HOM05D000265 ORTHO05D000161 3.4e-10 69.7 114 37.7
ClCG10G018330 Citrullus lanatus HOM05D000265 ORTHO05D000161 4.4e-10 69.3 128 36.7
Manes.09G045500 Manihot esculenta HOM05D000265 ORTHO05D000161 5.8e-10 68.9 146 33.6
Actinidia06182 Actinidia chinensis HOM05D000265 ORTHO05D000161 7.6e-10 68.6 130 37.7
CANSAT64G0347 Cannabis sativa HOM05D000265 ORTHO05D000161 7.6e-10 68.6 127 35.4
FAN05G3207 Fragaria x ananassa HOM05D000265 ORTHO05D000161 7.6e-10 68.6 111 34.2
AT3G11680 Arabidopsis thaliana HOM05D000265 ORTHO05D000161 9.9e-10 68.2 114 36.8
CiPaw.09G021000 Carya illinoinensis HOM05D000265 ORTHO05D000161 9.9e-10 68.2 121 35.5
FAN05G0045 Fragaria x ananassa HOM05D000265 ORTHO05D000161 9.9e-10 68.2 111 33.3
Dinv12339 Davidia involucrata HOM05D000265 ORTHO05D000161 1.7e-09 67.4 115 37.4
BNapus_Darmor_BZH_scaffold_145p00010 Brassica napus HOM05D000265 ORTHO05D000161 2.2e-09 67.0 159 32.7
BraA01t04168Z Brassica rapa HOM05D000265 ORTHO05D000161 2.2e-09 67.0 159 32.7
FAN02G3986 Fragaria x ananassa HOM05D000265 ORTHO05D000161 2.2e-09 67.0 111 32.4
BcaB06g25593 Brassica carinata HOM05D000265 ORTHO05D000161 2.9e-09 66.6 101 38.6
CARHR086230 Cardamine hirsuta HOM05D000265 ORTHO05D000161 2.9e-09 66.6 112 35.7
Sabra06G0156300 Salix brachista HOM05D000265 ORTHO05D000161 2.9e-09 66.6 123 37.4
BcaB06g25592 Brassica carinata HOM05D000265 ORTHO05D000161 3.7e-09 66.2 101 37.6
C05p56240 Brassica napus HOM05D000265 ORTHO05D000161 3.7e-09 66.2 101 37.6
CiPaw.09G021100 Carya illinoinensis HOM05D000265 ORTHO05D000161 3.7e-09 66.2 120 35.0
ClCG01G015030 Citrullus lanatus HOM05D000265 ORTHO05D000161 3.7e-09 66.2 180 31.1
FvH4_6g20330 Fragaria vesca HOM05D000265 ORTHO05D000161 3.7e-09 66.2 111 33.3
FAN14G3871 Fragaria x ananassa HOM05D000265 ORTHO05D000161 3.7e-09 66.2 111 33.3
SGA_v2.0_scaffold31G12857 Striga asiatica HOM05D000265 ORTHO05D000161 3.7e-09 66.2 128 37.5
BolC5t34287H Brassica oleracea HOM05D000265 ORTHO05D000161 6.4e-09 65.5 101 37.6
Atru.chr8.1357 Acer truncatum HOM05D000265 ORTHO05D000161 8.4e-09 65.1 109 36.7
FAN09G1042 Fragaria x ananassa HOM05D000265 ORTHO05D000161 8.4e-09 65.1 111 32.4
Prupe.7G094400 Prunus persica HOM05D000265 ORTHO05D000161 8.4e-09 65.1 118 35.6
TWI53G0940 Tripterygium wilfordii HOM05D000265 ORTHO05D000161 8.4e-09 65.1 176 31.2
SalBow5G3493 Salvia bowleyana HOM05D000265 ORTHO05D000161 1.1e-08 64.7 121 38.8
BcaC01g03166 Brassica carinata HOM05D000265 ORTHO05D000161 1.4e-08 64.3 101 37.6
A05p37650 Brassica napus HOM05D000265 ORTHO05D000161 1.4e-08 64.3 101 35.6
Duzib106G0130 Durio zibethinus HOM05D000265 ORTHO05D000161 1.4e-08 64.3 119 40.3
Atru.chr12.999 Acer truncatum HOM05D000265 ORTHO05D000161 1.9e-08 63.9 109 35.8
Aa31LG3G5100 Aethionema arabicum HOM05D000265 ORTHO05D000161 1.9e-08 63.9 117 32.5
Migut.J00699 Erythranthe guttata HOM05D000265 ORTHO05D000161 1.9e-08 63.9 135 37.0
Sp3g09910 Schrenkiella parvula HOM05D000265 ORTHO05D000161 1.9e-08 63.9 161 32.9
TAR636G3529 Trochodendron aralioides HOM05D000265 ORTHO05D000161 1.9e-08 63.9 110 35.5
Hma1.2p1_0079F.1_g041810 Hydrangea macrophylla HOM05D000265 ORTHO05D000161 2.4e-08 63.5 124 34.7
BraA05t22562Z Brassica rapa HOM05D000265 ORTHO05D000161 3.2e-08 63.2 101 35.6
BolC1t05299H Brassica oleracea HOM05D000265 ORTHO05D000161 4.1e-08 62.8 159 31.4
TWI74G0813 Tripterygium wilfordii HOM05D000265 ORTHO05D000161 4.1e-08 62.8 108 37.0
Phvul.001G195700 Phaseolus vulgaris HOM05D000265 ORTHO05D000161 5.4e-08 62.4 132 37.1
SalBow5G3266 Salvia bowleyana HOM05D000265 ORTHO05D018484 5.4e-08 62.4 120 35.8
TAR633G0444 Trochodendron aralioides HOM05D000265 ORTHO05D000161 5.4e-08 62.4 139 33.1
AUR62036381 Chenopodium quinoa HOM05D000265 ORTHO05D000161 7.1e-08 62.0 109 36.7
Ciclev10013861m.g Citrus clementina HOM05D000265 ORTHO05D000161 9.2e-08 61.6 129 34.9
Sed0012603 Sechium edule HOM05D000265 ORTHO05D000161 9.2e-08 61.6 145 35.2
GSVIVG01011148001 Vitis vinifera HOM05D000265 ORTHO05D000161 9.2e-08 61.6 79 40.5
CiPaw.10G017800 Carya illinoinensis HOM05D000265 ORTHO05D000161 1.2e-07 61.2 121 33.1
MELO3C015068.2 Cucumis melo HOM05D000265 ORTHO05D000161 1.2e-07 61.2 80 42.5
THA.LOC104816624 Tarenaya hassleriana HOM05D000265 ORTHO05D000161 1.2e-07 61.2 151 31.8
COL.COLO4_37848 Corchorus olitorius HOM05D000265 ORTHO05D000161 2.1e-07 60.5 79 40.5
PGSC0003DMG400039398 Solanum tuberosum HOM05D000265 ORTHO05D000161 2.7e-07 60.1 132 37.9
EL10Ac5g12967 Beta vulgaris HOM05D000265 ORTHO05D000161 4.6e-07 59.3 99 36.4
Ca_09058_v3 Cicer arietinum L. HOM05D000265 ORTHO05D000161 4.6e-07 59.3 120 34.2
QL07p036668 Quercus lobata HOM05D000265 ORTHO05D000161 4.6e-07 59.3 122 34.4
VMungo1383G2867 Vigna mungo HOM05D000265 ORTHO05D000161 4.6e-07 59.3 134 30.6
AUR62030743 Chenopodium quinoa HOM05D000265 ORTHO05D000161 6.0e-07 58.9 158 31.6
Glyma.03G202200 Glycine max HOM05D000265 ORTHO05D000161 6.0e-07 58.9 131 35.1
Manes.04G059800 Manihot esculenta HOM05D000265 ORTHO05D000161 6.0e-07 58.9 104 34.6
CsaV3_1G043760 Cucumis sativus L. HOM05D000265 ORTHO05D000161 1.0e-06 58.2 79 40.5
TPR.G35564 Trifolium pratense HOM05D000265 ORTHO05D000161 1.0e-06 58.2 131 32.8
Cpa.g.sc104.28 Carica papaya HOM05D000265 ORTHO05D000161 1.3e-06 57.8 79 43.0
ClCG01G007000 Citrullus lanatus HOM05D000265 ORTHO05D000161 1.3e-06 57.8 127 36.2
Rhsim03G0064400 Rhododendron simsii HOM05D000265 ORTHO05D000161 1.3e-06 57.8 105 36.2
DCAR_013442 Daucus carota HOM05D000265 ORTHO05D000161 1.7e-06 57.4 115 32.2
Potri.016G070000 Populus trichocarpa HOM05D000265 ORTHO05D000161 1.7e-06 57.4 120 35.8
PGSC0003DMG400035191 Solanum tuberosum HOM05D000265 ORTHO05D000161 1.7e-06 57.4 80 51.2
Thhalv10022400m.g Eutrema salsugineum HOM05D000265 ORTHO05D000161 2.3e-06 57.0 110 31.8
Lj3g0017202 Lotus japonicus HOM05D000265 ORTHO05D000161 2.3e-06 57.0 114 31.6
Potri.001G217200 Populus trichocarpa HOM05D000265 ORTHO05D000161 3.0e-06 56.6 122 30.3
HanXRQChr02g0053201 Helianthus annuus HOM05D000265 ORTHO05D000161 5.1e-06 55.8 80 38.8
Aqoxy1G00655 Aquilegia oxysepala HOM05D000265 ORTHO05D000161 6.6e-06 55.5 123 32.5
ClCG03G012150 Citrullus lanatus HOM05D000265 ORTHO05D000161 6.6e-06 55.5 79 40.5
THA.LOC104810163 Tarenaya hassleriana HOM05D000265 ORTHO05D000161 6.6e-06 55.5 122 33.6
Ca_16359_v3 Cicer arietinum L. HOM05D000265 ORTHO05D016910 8.6e-06 55.1 112 32.1
Glyma.12G188400 Glycine max HOM05D000265 ORTHO05D000161 8.6e-06 55.1 106 33.0
PSO384G4446 Papaver somniferum HOM05D000265 ORTHO05D000161 8.6e-06 55.1 110 34.5
Phvul.005G119700 Phaseolus vulgaris HOM05D000265 ORTHO05D000161 8.6e-06 55.1 111 34.2
Solyc01g007080.3 Solanum lycopersicum HOM05D000265 ORTHO05D000161 8.6e-06 55.1 124 41.1


User provided reference genes

Program Settings