Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000075g0210 Nicotiana tabacum HOM05D004453 ORTHO05D005375 2.5e-130 468.8 236 100.0
Nitab4.5_0002355g0020 Nicotiana tabacum HOM05D004453 ORTHO05D005375 1.4e-93 346.7 281 70.1
Solyc01g050070.4 Solanum lycopersicum HOM05D004453 ORTHO05D005375 5.1e-83 311.6 262 67.6
Peaxi162Scf00186g01212 Petunia axillaris HOM05D004453 ORTHO05D005375 1.3e-81 307.0 235 71.5
Sopen01g019490 Solanum pennellii HOM05D004453 ORTHO05D005375 4.8e-81 305.1 221 74.7
Cc01_g00270 Coffea canephora HOM05D004453 ORTHO05D005375 8.2e-65 251.1 229 59.8
Dinv13490 Davidia involucrata HOM05D004453 ORTHO05D005375 1.8e-64 250.0 235 60.9
Oeu023964.1 Olea europaea HOM05D004453 ORTHO05D005375 1.7e-62 243.4 236 56.8
Dinv03791 Davidia involucrata HOM05D004453 ORTHO05D005375 2.9e-62 242.7 235 59.1
Actinidia16228 Actinidia chinensis HOM05D004453 ORTHO05D005375 3.0e-59 232.6 234 56.8
Rhsim01G0183700 Rhododendron simsii HOM05D004453 ORTHO05D005375 1.1e-58 230.7 231 56.3
vmacro12597 Vaccinium macrocarpon HOM05D004453 ORTHO05D005375 6.3e-57 224.9 200 60.5
Manes.17G052200 Manihot esculenta HOM05D004453 ORTHO05D005375 9.1e-56 221.1 236 55.1
CSS0040072 Camellia sinensis var. sinensis HOM05D004453 ORTHO05D005375 2.6e-55 219.5 232 55.2
GSVIVG01025506001 Vitis vinifera HOM05D004453 ORTHO05D005375 2.6e-55 219.5 236 53.8
ClCG02G024480 Citrullus lanatus HOM05D004453 ORTHO05D005375 7.7e-55 218.0 198 60.1
CsaV3_4G017680 Cucumis sativus L. HOM05D004453 ORTHO05D005375 1.3e-54 217.2 241 52.7
MSTRG.18889 Avicennia marina HOM05D004453 ORTHO05D005375 1.7e-54 216.9 230 53.0
Cfa009532 Carpinus fangiana HOM05D004453 ORTHO05D005375 2.2e-54 216.5 236 53.8
QL01p007925 Quercus lobata HOM05D004453 ORTHO05D005375 2.2e-54 216.5 240 54.2
TAR623G1190 Trochodendron aralioides HOM05D004453 ORTHO05D005375 2.2e-54 216.5 236 52.1
Sed0012812 Sechium edule HOM05D004453 ORTHO05D005375 6.5e-54 214.9 229 52.4
THA.LOC104815673 Tarenaya hassleriana HOM05D004453 ORTHO05D005375 6.5e-54 214.9 243 51.9
DCAR_023824 Daucus carota HOM05D004453 ORTHO05D005375 1.6e-52 210.3 194 59.3
CARHR045220 Cardamine hirsuta HOM05D004453 ORTHO05D005375 2.7e-52 209.5 236 50.0
Manes.16G034900 Manihot esculenta HOM05D004453 ORTHO05D005375 2.7e-52 209.5 236 51.7
Cpa.g.sc119.21 Carica papaya HOM05D004453 ORTHO05D005375 3.6e-52 209.1 210 55.7
Lsat_1_v5_gn_1_71301 Lactuca sativa HOM05D004453 ORTHO05D005375 6.1e-52 208.4 229 52.8
Atru.chr4.902 Acer truncatum HOM05D004453 ORTHO05D005375 1.0e-51 207.6 236 53.4
MELO3C031044.2 Cucumis melo HOM05D004453 ORTHO05D005375 1.0e-51 207.6 206 56.8
TWI34G0101 Tripterygium wilfordii HOM05D004453 ORTHO05D005375 2.3e-51 206.5 237 52.7
MD11G1001200 Malus domestica HOM05D004453 ORTHO05D005375 3.0e-51 206.1 237 50.6
TWI60G0130 Tripterygium wilfordii HOM05D004453 ORTHO05D005375 6.8e-51 204.9 237 51.9
Thhalv10011735m.g Eutrema salsugineum HOM05D004453 ORTHO05D005375 8.8e-51 204.5 239 49.8
PGR119G0742 Punica granatum HOM05D004453 ORTHO05D005375 1.2e-50 204.1 235 50.2
MD03G1001500 Malus domestica HOM05D004453 ORTHO05D005375 2.0e-50 203.4 239 50.6
Prupe.6G001400 Prunus persica HOM05D004453 ORTHO05D005375 4.4e-50 202.2 236 50.8
BcaC08g44204 Brassica carinata HOM05D004453 ORTHO05D005375 9.8e-50 201.1 243 49.4
BolC6t36812H Brassica oleracea HOM05D004453 ORTHO05D005375 9.8e-50 201.1 243 49.4
Carub.0001s4404 Capsella rubella HOM05D004453 ORTHO05D005375 9.8e-50 201.1 239 49.0
ECA238G2653 Erigeron canadensis HOM05D004453 ORTHO05D005375 2.2e-49 199.9 233 50.6
Lj4g0023466 Lotus japonicus HOM05D004453 ORTHO05D005375 2.2e-49 199.9 233 50.6
Sp1g41150 Schrenkiella parvula HOM05D004453 ORTHO05D005375 3.7e-49 199.1 239 48.5
Hund01806 Selenicereus undatus HOM05D000185 ORTHO05D000105 4.8e-49 198.7 255 49.4
TPR.G34071 Trifolium pratense HOM05D004453 ORTHO05D005375 6.3e-49 198.4 240 50.0
Migut.N00531 Erythranthe guttata HOM05D004453 ORTHO05D005375 8.3e-49 198.0 234 49.1
Sc13g0003960 Simmondsia chinensis HOM05D004453 ORTHO05D005375 8.3e-49 198.0 209 54.1
Ca_18793_v3 Cicer arietinum L. HOM05D004453 ORTHO05D005375 1.1e-48 197.6 240 49.2
Ah.04g153920 Amaranthus hybridus HOM05D004453 ORTHO05D005375 1.8e-48 196.8 217 51.2
AL1G63560 Arabidopsis lyrata HOM05D004453 ORTHO05D005375 1.8e-48 196.8 236 48.7
Nn7g35809 Nelumbo nucifera HOM05D004453 ORTHO05D005375 2.4e-48 196.4 258 46.1
Psat7g133480 Pisum sativum HOM05D004453 ORTHO05D005375 2.4e-48 196.4 242 50.0
Glyma.20G024900 Glycine max HOM05D004453 ORTHO05D005375 3.1e-48 196.1 240 49.2
HanXRQChr14g0437111 Helianthus annuus HOM05D004453 ORTHO05D005375 3.1e-48 196.1 233 48.9
Medtr4g083300 Medicago truncatula HOM05D004453 ORTHO05D005375 5.4e-48 195.3 242 50.8
Nn2g15897 Nelumbo nucifera HOM05D004453 ORTHO05D005375 9.1e-48 194.5 232 51.7
TAR369G0719 Trochodendron aralioides HOM05D004453 ORTHO05D005375 2.0e-47 193.4 234 50.0
A05p17380 Brassica napus HOM05D004453 ORTHO05D005375 2.7e-47 193.0 242 47.1
AUR62040892 Chenopodium quinoa HOM05D001653 ORTHO05D001751 2.7e-47 193.0 204 52.5
AUR62042621 Chenopodium quinoa HOM05D004453 ORTHO05D005375 2.7e-47 193.0 204 52.5
AT1G55535 Arabidopsis thaliana HOM05D004453 ORTHO05D005375 4.5e-47 192.2 239 46.9
Glyma.07G225000 Glycine max HOM05D004453 ORTHO05D005375 1.0e-46 191.0 240 47.9
Phvul.002G101400 Phaseolus vulgaris HOM05D004453 ORTHO05D005375 1.3e-46 190.7 240 48.8
Aqoxy1G00087 Aquilegia oxysepala HOM05D004453 ORTHO05D005375 1.7e-46 190.3 235 48.5
EL10Ac7g17533 Beta vulgaris HOM05D004453 ORTHO05D005375 1.7e-46 190.3 212 50.0
BcaB02g10815 Brassica carinata HOM05D004453 ORTHO05D005375 2.2e-46 189.9 244 48.4
FAN25G0403 Fragaria x ananassa HOM05D004453 ORTHO05D005375 2.2e-46 189.9 237 49.4
FvH4_3g45940 Fragaria vesca HOM05D004453 ORTHO05D005375 2.9e-46 189.5 237 48.9
FAN11G3564 Fragaria x ananassa HOM05D004453 ORTHO05D005375 2.9e-46 189.5 237 48.9
FAN21G0323 Fragaria x ananassa HOM05D004453 ORTHO05D005375 2.9e-46 189.5 237 48.9
Lalb_Chr16g0385441 Lupinus albus HOM05D004453 ORTHO05D005375 2.9e-46 189.5 235 48.9
C06p16140 Brassica napus HOM05D004453 ORTHO05D005375 3.8e-46 189.1 243 48.6
FAN16G2113 Fragaria x ananassa HOM05D004453 ORTHO05D005375 5.0e-46 188.7 237 48.9
QL01p007909 Quercus lobata HOM05D004453 ORTHO05D005375 5.0e-46 188.7 184 59.2
RcHm_v2.0_Chr5g0084051 Rosa chinensis HOM05D004453 ORTHO05D005375 8.5e-46 188.0 240 47.5
Ciclev10016282m.g Citrus clementina HOM05D004453 ORTHO05D005375 1.5e-45 187.2 244 48.0
COL.COLO4_35070 Corchorus olitorius HOM05D004453 ORTHO05D005375 5.5e-45 185.3 247 49.8
MBI19_g09317_MAGBIO Magnolia biondii HOM05D004453 ORTHO05D005375 9.4e-45 184.5 238 49.6
arahy.Tifrunner.gnm1.ann1.GHD6QC Arachis hypogaea HOM05D004453 ORTHO05D005375 1.2e-44 184.1 235 46.8
A08p00560 Brassica napus HOM05D004453 ORTHO05D005375 1.6e-44 183.7 242 46.7
Eucgr.J01746 Eucalyptus grandis HOM05D004453 ORTHO05D005375 1.6e-44 183.7 236 46.2
BraA08t32115Z Brassica rapa HOM05D004453 ORTHO05D005375 2.1e-44 183.3 242 46.7
PSO339G2035 Papaver somniferum HOM05D004453 ORTHO05D005375 2.7e-44 183.0 237 43.9
PSO384G0395 Papaver somniferum HOM05D004453 ORTHO05D005375 4.7e-44 182.2 235 44.3
arahy.Tifrunner.gnm1.ann1.C35Y2E Arachis hypogaea HOM05D004453 ORTHO05D005375 6.1e-44 181.8 235 46.4
Potri.001G001400 Populus trichocarpa HOM05D004453 ORTHO05D005375 1.0e-43 181.0 193 53.9
SGA_v2.0_scaffold6G03329 Striga asiatica HOM05D004453 ORTHO05D005375 1.0e-43 181.0 226 48.2
Sabra01G0001000 Salix brachista HOM05D004453 ORTHO05D005375 1.4e-43 180.6 193 53.9
VMungo0251G3504 Vigna mungo HOM05D004453 ORTHO05D005375 1.4e-43 180.6 198 51.5
Eucgr.B03584 Eucalyptus grandis HOM05D004453 ORTHO05D005375 1.8e-43 180.3 198 52.5
BcaC01g01533 Brassica carinata HOM05D004453 ORTHO05D005375 3.0e-43 179.5 245 46.1
C03p92850 Brassica napus HOM05D004453 ORTHO05D005375 4.0e-43 179.1 247 45.7
BolC3t21591H Brassica oleracea HOM05D004453 ORTHO05D005375 4.0e-43 179.1 247 45.7
PGR102G2973 Punica granatum HOM05D004453 ORTHO05D005375 4.0e-43 179.1 236 46.6
ECA248G0105 Erigeron canadensis HOM05D004453 ORTHO05D005375 3.4e-42 176.0 224 49.6
Lalb_Chr05g0219881 Lupinus albus HOM05D004453 ORTHO05D005375 2.2e-41 173.3 203 51.2
Aa31LG10G710 Aethionema arabicum HOM05D004453 ORTHO05D005375 4.9e-41 172.2 216 48.6
SGA_v2.0_scaffold3G01700 Striga asiatica HOM05D004453 ORTHO05D005375 4.9e-41 172.2 198 50.5
Thecc.09G205600 Theobroma cacao HOM05D004453 ORTHO05D005375 1.8e-40 170.2 239 46.9
Duzib150G1073 Durio zibethinus HOM05D004453 ORTHO05D005375 5.4e-40 168.7 248 46.4
Gohir.D03G147000 Gossypium hirsutum HOM05D004453 ORTHO05D005375 9.1e-40 167.9 201 50.7
Haze_22921 Corylus avellana HOM05D004453 ORTHO05D005375 2.0e-39 166.8 200 51.0
CiPaw.13G179200 Carya illinoinensis HOM05D004453 ORTHO05D005375 3.5e-39 166.0 166 57.8
Gorai.003G154400 Gossypium raimondii HOM05D004453 ORTHO05D005375 1.0e-38 164.5 201 49.8
Lsat_1_v5_gn_2_50660 Lactuca sativa HOM05D004453 ORTHO05D005375 1.0e-38 164.5 234 44.4
CDE04G0921 Ceratophyllum demersum HOM05D004453 ORTHO05D005375 1.3e-38 164.1 203 47.8
Gohir.A03G021700 Gossypium hirsutum HOM05D004453 ORTHO05D005375 5.0e-38 162.2 201 49.8
ATR0068G064 Amborella trichopoda HOM05D004453 ORTHO05D005375 6.6e-38 161.8 235 45.1
CDE02G3000 Ceratophyllum demersum HOM05D004453 ORTHO05D005375 8.6e-38 161.4 203 46.8
SHI31305 Sapria himalayana HOM05D004453 ORTHO05D005375 7.2e-37 158.3 175 54.3
Lj1C553T2 Lonicera japonica HOM05D004453 ORTHO05D005375 4.7e-36 155.6 126 67.5
Gohir.A08G014200 Gossypium hirsutum HOM05D004453 ORTHO05D005375 1.8e-35 153.7 248 45.2
PSO675G3694 Papaver somniferum HOM05D004453 ORTHO05D005375 1.5e-34 150.6 216 43.5
Carub.0003s1279 Capsella rubella HOM05D004453 ORTHO05D005375 3.4e-34 149.4 261 39.8
Gohir.D08G020800 Gossypium hirsutum HOM05D004453 ORTHO05D005375 3.4e-34 149.4 248 43.1
Gorai.004G020100 Gossypium raimondii HOM05D004453 ORTHO05D005375 3.4e-34 149.4 248 43.1
AL3G25290 Arabidopsis lyrata HOM05D004453 ORTHO05D005375 4.4e-34 149.1 265 41.5
Os07g0223700 Oryza sativa ssp. japonica HOM05D004453 ORTHO05D005375 4.4e-34 149.1 230 43.5
HPP92_026813 Vanilla planifolia HOM05D004453 ORTHO05D005375 5.7e-34 148.7 226 41.6
PSO541G5087 Papaver somniferum HOM05D004453 ORTHO05D005375 7.5e-34 148.3 216 42.6
HPP92_000788 Vanilla planifolia HOM05D004453 ORTHO05D005375 1.3e-33 147.5 227 41.0
Oeu060910.1 Olea europaea HOM05D004453 ORTHO05D005375 3.7e-33 146.0 113 63.7
Thhalv10021458m.g Eutrema salsugineum HOM05D004453 ORTHO05D005375 1.4e-32 144.1 215 41.4
AT3G13420 Arabidopsis thaliana HOM05D004453 ORTHO05D005375 3.2e-32 142.9 171 50.9
CARHR088030 Cardamine hirsuta HOM05D004453 ORTHO05D005375 3.2e-32 142.9 258 39.9
SEGI_24089 Sequoiadendron giganteum HOM05D004453 ORTHO05D005375 5.4e-32 142.1 198 43.9
Zm00001eb303530 Zea mays HOM05D004453 ORTHO05D005375 9.2e-32 141.4 228 39.9
Aa31LG8G630 Aethionema arabicum HOM05D004453 ORTHO05D005375 1.6e-31 140.6 195 43.6
A05p36110 Brassica napus HOM05D004453 ORTHO05D005375 4.6e-31 139.0 162 49.4
C05p54480 Brassica napus HOM05D004453 ORTHO05D005375 7.8e-31 138.3 162 48.1
BolC5t34115H Brassica oleracea HOM05D004453 ORTHO05D005375 7.8e-31 138.3 162 48.1
Potri.003G223300 Populus trichocarpa HOM05D004453 ORTHO05D005375 1.3e-30 137.5 225 41.3
unitig_52.g17526 Utricularia gibba HOM05D004453 ORTHO05D005375 5.0e-30 135.6 230 37.8
SHI06880 Sapria himalayana HOM05D004453 ORTHO05D005375 8.6e-30 134.8 164 50.6
Sp3g11610 Schrenkiella parvula HOM05D004453 ORTHO05D005375 9.5e-29 131.3 214 42.5
unitig_62.g23532 Utricularia gibba HOM05D004453 ORTHO05D005375 4.0e-27 125.9 219 37.4
BcaC05g29180 Brassica carinata HOM05D004453 ORTHO05D005375 5.8e-26 122.1 148 48.0
SMO271G0148 Selaginella moellendorffii HOM05D004453 ORTHO05D005375 6.6e-22 108.6 188 39.9
AagrBONN_evm.TU.Sc2ySwM_228.4359 Anthoceros agrestis HOM05D004453 ORTHO05D005375 1.9e-21 107.1 196 34.7
Mapoly0036s0042 Marchantia polymorpha HOM05D004453 ORTHO05D005375 1.9e-21 107.1 211 36.0
SMO203G0107 Selaginella moellendorffii HOM05D004453 ORTHO05D005375 3.6e-20 102.8 187 38.0
BraA05t20635Z Brassica rapa HOM05D004453 ORTHO05D005375 2.6e-18 96.7 128 47.7
Actinidia30440 Actinidia chinensis HOM05D004453 ORTHO05D005375 4.9e-17 92.4 87 58.6
SalBow3G0087 Salvia bowleyana HOM05D004453 ORTHO05D005375 1.9e-16 90.5 151 37.7
Zm00001eb095200 Zea mays HOM05D004453 ORTHO05D005375 3.2e-16 89.7 110 49.1
Pp3c14_21170 Physcomitrium patens HOM05D004453 ORTHO05D005375 2.7e-15 86.7 195 31.8
BcaB01g02219 Brassica carinata HOM05D004453 ORTHO05D005375 6.0e-15 85.5 91 52.7
Lj1C553T1 Lonicera japonica HOM05D004453 ORTHO05D005375 1.0e-14 84.7 111 45.9
Pp3c1_38420 Physcomitrium patens HOM05D004453 ORTHO05D005375 3.0e-14 83.2 183 33.9
Psat5g028160 Pisum sativum HOM05D004453 ORTHO05D005375 1.9e-13 80.5 85 51.8
Pp3c2_4610 Physcomitrium patens HOM05D004453 ORTHO05D005375 2.5e-13 80.1 192 32.3
Psat5g028080 Pisum sativum HOM05D004453 ORTHO05D005375 4.3e-13 79.3 85 50.6
CARHR152870 Cardamine hirsuta HOM05D004453 ORTHO05D005375 8.9e-11 71.6 115 40.9
SMO353G0048 Selaginella moellendorffii HOM05D004453 ORTHO05D005375 9.9e-10 68.2 201 28.4
HPP92_019024 Vanilla planifolia HOM05D004453 ORTHO05D005375 2.2e-09 67.0 118 39.0
HPP92_019023 Vanilla planifolia HOM05D004453 ORTHO05D005375 6.4e-09 65.5 50 52.0


User provided reference genes

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