Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000075g0200 Nicotiana tabacum HOM05D006753 ORTHO05D008521 3.0e-76 288.5 150 100.0
Nitab4.5_0008337g0010 Nicotiana tabacum HOM05D006753 ORTHO05D008521 5.2e-65 251.1 150 89.3
Nitab4.5_0001307g0130 Nicotiana tabacum HOM05D006753 ORTHO05D008521 1.9e-62 242.7 150 86.7
Nitab4.5_0002355g0040 Nicotiana tabacum HOM05D006753 ORTHO05D008521 2.6e-56 222.2 150 82.7
Sopen03g009600 Solanum pennellii HOM05D006753 ORTHO05D008521 8.7e-44 180.6 132 75.0
PGSC0003DMG400018762 Solanum tuberosum HOM05D006753 ORTHO05D008521 3.3e-43 178.7 132 74.2
CAN.G815.2 Capsicum annuum HOM05D006753 ORTHO05D008521 4.3e-43 178.3 125 78.4
Peaxi162Scf00003g02334 Petunia axillaris HOM05D006753 ORTHO05D008521 1.9e-38 162.9 105 81.9
MSTRG.13663 Avicennia marina HOM05D006753 ORTHO05D008521 1.1e-35 153.7 141 60.3
Migut.E00593 Erythranthe guttata HOM05D006753 ORTHO05D008521 1.4e-33 146.7 142 57.0
SGA_v2.0_scaffold119G32769 Striga asiatica HOM05D006753 ORTHO05D008521 1.8e-33 146.4 140 57.9
Migut.E00658 Erythranthe guttata HOM05D006753 ORTHO05D008521 5.3e-33 144.8 142 56.3
MD13G1001300 Malus domestica HOM05D006753 ORTHO05D008521 6.9e-33 144.4 142 59.2
Oeu006328.1 Olea europaea HOM05D006753 ORTHO05D008521 3.4e-32 142.1 150 58.0
Duzib052G0750 Durio zibethinus HOM05D006753 ORTHO05D008521 4.5e-32 141.7 130 60.8
FvH4_4g37311 Fragaria vesca HOM05D006753 ORTHO05D008521 7.6e-32 141.0 128 60.9
FAN17G2405 Fragaria x ananassa HOM05D006753 ORTHO05D008521 7.6e-32 141.0 128 60.2
TWI53G0448 Tripterygium wilfordii HOM05D006753 ORTHO05D008521 7.6e-32 141.0 132 58.3
TAR629G2108 Trochodendron aralioides HOM05D006753 ORTHO05D008521 7.6e-32 141.0 128 60.9
Lj5g0026283 Lotus japonicus HOM05D006753 ORTHO05D008521 9.9e-32 140.6 132 57.6
Thecc.02G152400 Theobroma cacao HOM05D006753 ORTHO05D008521 2.9e-31 139.0 126 57.1
DCAR_023493 Daucus carota HOM05D006753 ORTHO05D008521 6.4e-31 137.9 135 56.3
FAN07G1749 Fragaria x ananassa HOM05D006753 ORTHO05D008521 6.4e-31 137.9 128 59.4
GSVIVG01034354001 Vitis vinifera HOM05D006753 ORTHO05D008521 6.4e-31 137.9 132 59.8
Lalb_Chr02g0144111 Lupinus albus HOM05D006753 ORTHO05D008521 8.4e-31 137.5 126 57.1
Phvul.007G012200 Phaseolus vulgaris HOM05D006753 ORTHO05D008521 1.1e-30 137.1 128 59.4
RcHm_v2.0_Chr4g0447151 Rosa chinensis HOM05D006753 ORTHO05D008521 1.4e-30 136.7 125 60.0
Cfa018673 Carpinus fangiana HOM05D006753 ORTHO05D008521 2.4e-30 136.0 133 56.4
Sc21g0003760 Simmondsia chinensis HOM05D006753 ORTHO05D008521 5.5e-30 134.8 130 58.5
Glyma.10G288900 Glycine max HOM05D006753 ORTHO05D008521 7.1e-30 134.4 124 56.5
Manes.04G161100 Manihot esculenta HOM05D006753 ORTHO05D008521 9.3e-30 134.0 118 59.3
CANSAT78G0938 Cannabis sativa HOM05D006753 ORTHO05D008521 1.2e-29 133.7 134 56.0
Duzib132G0454 Durio zibethinus HOM05D006753 ORTHO05D008521 1.6e-29 133.3 125 57.6
PGR044G1510 Punica granatum HOM05D006753 ORTHO05D008521 1.6e-29 133.3 129 58.9
MBI03_g11899_MAGBIO Magnolia biondii HOM05D006753 ORTHO05D008521 4.6e-29 131.7 121 58.7
Nn3g18540 Nelumbo nucifera HOM05D006753 ORTHO05D008521 4.6e-29 131.7 128 56.2
ECA238G1815 Erigeron canadensis HOM05D006753 ORTHO05D008521 1.0e-28 130.6 137 56.2
QL01p000327 Quercus lobata HOM05D006753 ORTHO05D008521 1.0e-28 130.6 137 50.4
COL.COLO4_33141 Corchorus olitorius HOM05D006753 ORTHO05D008521 1.3e-28 130.2 129 55.8
Medtr1g115255 Medicago truncatula HOM05D006753 ORTHO05D008521 1.3e-28 130.2 133 56.4
Potri.008G003100 Populus trichocarpa HOM05D006753 ORTHO05D008521 1.3e-28 130.2 123 56.9
Sed0019092 Sechium edule HOM05D006753 ORTHO05D008521 2.3e-28 129.4 127 55.1
Ciclev10017207m.g Citrus clementina HOM05D006753 ORTHO05D008521 3.0e-28 129.0 124 57.3
Thhalv10002245m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 5.1e-28 128.3 131 56.5
Dinv25482 Davidia involucrata HOM05D006753 ORTHO05D008521 6.7e-28 127.9 135 52.6
MELO3C011766.2 Cucumis melo HOM05D006753 ORTHO05D008521 2.5e-27 125.9 126 54.8
Atru.chr11.42 Acer truncatum HOM05D006753 ORTHO05D008521 3.3e-27 125.6 124 58.1
EL10Ac9g23017 Beta vulgaris HOM05D006753 ORTHO05D008521 5.6e-27 124.8 119 57.1
CiPaw.16G000900 Carya illinoinensis HOM05D006753 ORTHO05D008521 7.4e-27 124.4 125 56.0
Rhsim05G0152000 Rhododendron simsii HOM05D006753 ORTHO05D008521 2.8e-26 122.5 110 60.0
Ca_11278_v3 Cicer arietinum L. HOM05D006753 ORTHO05D008521 3.7e-26 122.1 130 53.1
CsaV3_5G029140 Cucumis sativus L. HOM05D006753 ORTHO05D008521 3.7e-26 122.1 126 52.4
Sabra08G0001000 Salix brachista HOM05D006753 ORTHO05D008521 4.8e-26 121.7 121 54.5
AUR62032899 Chenopodium quinoa HOM05D006753 ORTHO05D008521 6.2e-26 121.3 124 56.5
Lsat_1_v5_gn_2_64221 Lactuca sativa HOM05D006753 ORTHO05D008521 1.1e-25 120.6 124 55.6
RcHm_v2.0_Chr5g0030611 Rosa chinensis HOM05D006753 ORTHO05D008521 1.1e-25 120.6 124 54.0
ClCG11G012760 Citrullus lanatus HOM05D006753 ORTHO05D008521 1.8e-25 119.8 136 51.5
Sp6g34360 Schrenkiella parvula HOM05D006753 ORTHO05D008521 2.4e-25 119.4 133 52.6
VMungo0720G0065 Vigna mungo HOM05D006753 ORTHO05D008521 2.4e-25 119.4 129 51.9
FAN11G3971 Fragaria x ananassa HOM05D006753 ORTHO05D008521 5.3e-25 118.2 122 52.5
ATR0124G001 Amborella trichopoda HOM05D006753 ORTHO05D008521 6.9e-25 117.9 123 54.5
CDE05G0871 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 9.0e-25 117.5 130 55.4
CDE05G2438 Ceratophyllum demersum HOM05D006753 ORTHO05D008521 9.0e-25 117.5 131 55.0
FvH4_3g18161 Fragaria vesca HOM05D006753 ORTHO05D008521 2.6e-24 115.9 122 51.6
AUR62020818 Chenopodium quinoa HOM05D006753 ORTHO05D008521 4.5e-24 115.2 124 53.2
Psat6g234480 Pisum sativum HOM05D006753 ORTHO05D008521 5.8e-24 114.8 124 53.2
AUR62017753 Chenopodium quinoa HOM05D006753 ORTHO05D008521 7.6e-24 114.4 124 54.0
Os10g0491900 Oryza sativa ssp. japonica HOM05D006753 ORTHO05D008521 1.7e-23 113.2 123 52.0
TPR.G4104 Trifolium pratense HOM05D006753 ORTHO05D008521 1.1e-22 110.5 131 51.1
AT3G52350 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 1.4e-22 110.2 125 52.8
Gohir.D12G135600 Gossypium hirsutum HOM05D006753 ORTHO05D008521 1.4e-22 110.2 125 50.4
Carub.0005s1869 Capsella rubella HOM05D006753 ORTHO05D008521 7.1e-22 107.8 118 50.8
CARHR204450 Cardamine hirsuta HOM05D006753 ORTHO05D008521 9.3e-22 107.5 128 52.3
Zm00001eb044950 Zea mays HOM05D006753 ORTHO05D008521 1.2e-21 107.1 118 50.0
SEGI_09956 Sequoiadendron giganteum HOM05D006753 ORTHO05D008521 1.6e-21 106.7 138 44.2
Gohir.A12G132000 Gossypium hirsutum HOM05D006753 ORTHO05D008521 2.7e-21 105.9 124 49.2
Pp3c15_7650 Physcomitrium patens HOM05D006753 ORTHO05D008521 2.7e-21 105.9 139 46.8
Gorai.008G146800 Gossypium raimondii HOM05D006753 ORTHO05D008521 3.5e-21 105.5 125 48.8
Aqoxy3G04333 Aquilegia oxysepala HOM05D006753 ORTHO05D008521 1.0e-20 104.0 110 50.0
BcaC07g41240 Brassica carinata HOM05D006753 ORTHO05D008521 1.0e-20 104.0 131 48.9
C08p42460 Brassica napus HOM05D006753 ORTHO05D008521 1.0e-20 104.0 131 48.9
BolC8t51807H Brassica oleracea HOM05D006753 ORTHO05D008521 1.0e-20 104.0 131 48.9
BraA09t41301Z Brassica rapa HOM05D006753 ORTHO05D008521 1.0e-20 104.0 122 52.5
Lj6g0020021 Lotus japonicus HOM05D006753 ORTHO05D008521 1.3e-20 103.6 126 49.2
Cc11_g04160 Coffea canephora HOM05D006753 ORTHO05D008521 3.0e-20 102.4 64 73.4
Prupe.1G351400 Prunus persica HOM05D006753 ORTHO05D008521 6.7e-20 101.3 140 45.0
BcaB08g34880 Brassica carinata HOM05D006753 ORTHO05D008521 8.7e-20 100.9 131 46.6
A09p59170 Brassica napus HOM05D006753 ORTHO05D008521 8.7e-20 100.9 127 49.6
arahy.Tifrunner.gnm1.ann1.IW7U68 Arachis hypogaea HOM05D006753 ORTHO05D008521 2.5e-19 99.4 61 72.1
AL5G33000 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 4.3e-19 98.6 137 46.7
arahy.Tifrunner.gnm1.ann1.RGG8YR Arachis hypogaea HOM05D006753 ORTHO05D008521 1.3e-18 97.1 60 71.7
C09p68400 Brassica napus HOM05D006753 ORTHO05D008521 1.3e-18 97.1 133 46.6
AT5G08535 Arabidopsis thaliana HOM05D006753 ORTHO05D008521 2.2e-18 96.3 124 47.6
HanXRQChr14g0446421 Helianthus annuus HOM05D006753 ORTHO05D008521 2.2e-18 96.3 60 75.0
PSO782G2482 Papaver somniferum HOM05D006753 ORTHO05D008521 2.8e-18 95.9 122 48.4
AL6G19240 Arabidopsis lyrata HOM05D006753 ORTHO05D008521 6.3e-18 94.7 122 48.4
PSO063G2822 Papaver somniferum HOM05D006753 ORTHO05D008521 6.3e-18 94.7 122 48.4
BolC9t59587H Brassica oleracea HOM05D006753 ORTHO05D008521 8.2e-18 94.4 133 45.9
A10p28190 Brassica napus HOM05D006753 ORTHO05D008521 1.4e-17 93.6 133 45.1
BraA10t44868Z Brassica rapa HOM05D006753 ORTHO05D008521 1.4e-17 93.6 133 45.1
Eucgr.J00331 Eucalyptus grandis HOM05D006753 ORTHO05D008521 1.8e-17 93.2 177 39.0
Mapoly0001s0293 Marchantia polymorpha HOM05D006753 ORTHO05D008521 1.0e-15 87.4 118 44.9
Carub.0006s0749 Capsella rubella HOM05D006753 ORTHO05D008521 3.8e-15 85.5 127 45.7
SMO166G0033 Selaginella moellendorffii HOM05D006753 ORTHO05D008521 6.5e-15 84.7 140 40.7
Aa31LG3G18000 Aethionema arabicum HOM05D006753 ORTHO05D008521 1.9e-14 83.2 121 47.1
SMO115G0110 Selaginella moellendorffii HOM05D000422 ORTHO05D002369 5.5e-14 81.6 138 39.9
HPP92_003487 Vanilla planifolia HOM05D006753 ORTHO05D008521 2.1e-13 79.7 128 41.4
HPP92_026885 Vanilla planifolia HOM05D006753 ORTHO05D008521 2.1e-13 79.7 128 41.4
Thhalv10015604m.g Eutrema salsugineum HOM05D006753 ORTHO05D008521 4.6e-13 78.6 92 52.2
BcaB08g37248 Brassica carinata HOM05D006753 ORTHO05D008521 1.8e-12 76.6 118 44.9
SHI21226 Sapria himalayana HOM05D000843 ORTHO05D000698 6.7e-12 74.7 77 53.2
vmacro19681 Vaccinium macrocarpon HOM05D006753 ORTHO05D008521 2.6e-08 62.8 51 56.9
AagrBONN_evm.TU.Sc2ySwM_228.1188 Anthoceros agrestis HOM05D006753 ORTHO05D008521 1.3e-07 60.5 115 36.5
Haze_17401 Corylus avellana HOM05D006753 ORTHO05D008521 5.5e-06 55.1 48 58.3
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 5.5e-06 55.1 132 32.6
Cre02.g085200 Chlamydomonas reinhardtii HOM05D006753 ORTHO05D008521 9.4e-06 54.3 49 49.0


User provided reference genes

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