Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000074g0270 Nicotiana tabacum HOM05D002638 ORTHO05D002821 1.5e-68 262.7 132 100.0
Peaxi162Scf00304g00222 Petunia axillaris HOM05D002638 ORTHO05D002821 4.8e-30 134.8 98 68.4
Sopen06g016130 Solanum pennellii HOM05D002638 ORTHO05D002821 6.9e-29 131.0 118 58.5
Solyc06g050590.3 Solanum lycopersicum HOM05D002638 ORTHO05D002821 1.5e-28 129.8 118 58.5
Nitab4.5_0002854g0030 Nicotiana tabacum HOM05D002638 ORTHO05D002821 2.6e-28 129.0 118 56.8
Nitab4.5_0001106g0140 Nicotiana tabacum HOM05D002638 ORTHO05D002821 6.5e-27 124.4 118 56.8
PGSC0003DMG400023955 Solanum tuberosum HOM05D002638 ORTHO05D002821 8.5e-27 124.0 118 55.9
CAN.G17.3 Capsicum annuum HOM05D002638 ORTHO05D002821 7.2e-26 120.9 123 53.7
Peaxi162Scf00284g00223 Petunia axillaris HOM05D002638 ORTHO05D002821 1.5e-23 113.2 130 50.8
Cc02_g05910 Coffea canephora HOM05D002638 ORTHO05D002821 4.8e-14 81.6 97 41.2
arahy.Tifrunner.gnm1.ann1.AGI60H Arachis hypogaea HOM05D002638 ORTHO05D002821 7.0e-13 77.8 127 31.5
Dinv10574 Davidia involucrata HOM05D002638 ORTHO05D002821 2.0e-12 76.3 116 37.9
Glyma.11G233700 Glycine max HOM05D002638 ORTHO05D002821 3.5e-12 75.5 125 34.4
Rhsim09G0181500 Rhododendron simsii HOM05D002638 ORTHO05D002821 1.7e-11 73.2 91 41.8
Lalb_Chr08g0231391 Lupinus albus HOM05D002638 ORTHO05D002821 2.2e-11 72.8 120 33.3
ClCG11G005970 Citrullus lanatus HOM05D002638 ORTHO05D002821 3.8e-11 72.0 86 45.3
Dinv21797 Davidia involucrata HOM05D002638 ORTHO05D002821 5.0e-11 71.6 120 36.7
GSVIVG01032737001 Vitis vinifera HOM05D002638 ORTHO05D002821 5.0e-11 71.6 97 38.1
Lj6g0006950 Lotus japonicus HOM05D002638 ORTHO05D002821 6.5e-11 71.2 125 33.6
Potri.008G074100 Populus trichocarpa HOM05D002638 ORTHO05D002821 6.5e-11 71.2 91 38.5
Atru.chr12.118 Acer truncatum HOM05D002638 ORTHO05D002821 8.5e-11 70.9 124 36.3
arahy.Tifrunner.gnm1.ann1.JA22RM Arachis hypogaea HOM05D002638 ORTHO05D002821 1.9e-10 69.7 127 33.9
Glyma.18G023300 Glycine max HOM05D002638 ORTHO05D002821 2.5e-10 69.3 125 33.6
Medtr3g071960 Medicago truncatula HOM05D002638 ORTHO05D002821 2.5e-10 69.3 101 38.6
TWI73G0136 Tripterygium wilfordii HOM05D002638 ORTHO05D002821 2.5e-10 69.3 119 33.6
Potri.010G183200 Populus trichocarpa HOM05D002638 ORTHO05D002821 4.2e-10 68.6 91 39.6
Phvul.001G247000 Phaseolus vulgaris HOM05D002638 ORTHO05D002821 5.5e-10 68.2 126 31.7
DCAR_000426 Daucus carota HOM05D002638 ORTHO05D002821 7.2e-10 67.8 69 42.0
Sabra08G0055200 Salix brachista HOM05D000490 ORTHO05D001398 7.2e-10 67.8 91 38.5
CSS0017510 Camellia sinensis var. sinensis HOM05D002638 ORTHO05D002821 9.4e-10 67.4 100 37.0
TWI09G0298 Tripterygium wilfordii HOM05D002638 ORTHO05D002821 9.4e-10 67.4 121 31.4
Medtr5g083520 Medicago truncatula HOM05D002638 ORTHO05D002821 1.6e-09 66.6 98 38.8
Prupe.2G257900 Prunus persica HOM05D002638 ORTHO05D002821 1.6e-09 66.6 121 33.9
Ca_20871_v3 Cicer arietinum L. HOM05D002638 ORTHO05D002821 2.1e-09 66.2 100 35.0
Psat5g126160 Pisum sativum HOM05D002638 ORTHO05D002821 2.1e-09 66.2 104 37.5
Gorai.010G193700 Gossypium raimondii HOM05D002638 ORTHO05D002821 2.7e-09 65.9 89 39.3
TAR633G1453 Trochodendron aralioides HOM05D002638 ORTHO05D002821 2.7e-09 65.9 89 40.4
Actinidia00976 Actinidia chinensis HOM05D002638 ORTHO05D002821 3.6e-09 65.5 120 33.3
Hma1.2p1_0292F.1_g115620 Hydrangea macrophylla HOM05D002638 ORTHO05D002821 3.6e-09 65.5 124 29.0
Psat2g029880 Pisum sativum HOM05D002638 ORTHO05D002821 3.6e-09 65.5 100 36.0
Sed0010113 Sechium edule HOM05D002638 ORTHO05D002821 4.7e-09 65.1 120 35.8
Cfa001258 Carpinus fangiana HOM05D002655 ORTHO05D002558 8.0e-09 64.3 103 37.9
MELO3C008321.2 Cucumis melo HOM05D002638 ORTHO05D002821 1.0e-08 63.9 113 33.6
arahy.Tifrunner.gnm1.ann1.2XR7QU Arachis hypogaea HOM05D002638 ORTHO05D002821 1.8e-08 63.2 122 31.1
Gohir.D06G166101 Gossypium hirsutum HOM05D002638 ORTHO05D002821 1.8e-08 63.2 86 39.5
Ca_15167_v3 Cicer arietinum L. HOM05D002638 ORTHO05D002821 2.3e-08 62.8 91 39.6
Migut.F00626 Erythranthe guttata HOM05D002638 ORTHO05D002821 2.3e-08 62.8 107 34.6
Sc10g0002760 Simmondsia chinensis HOM05D002638 ORTHO05D002821 3.0e-08 62.4 91 37.4
MSTRG.8358 Avicennia marina HOM05D002638 ORTHO05D002821 4.0e-08 62.0 103 36.9
Actinidia00654 Actinidia chinensis HOM05D002638 ORTHO05D002821 5.2e-08 61.6 97 33.0
Cpa.g.sc19.114 Carica papaya HOM05D002638 ORTHO05D002821 5.2e-08 61.6 73 42.5
Lalb_Chr10g0105351 Lupinus albus HOM05D002638 ORTHO05D002821 5.2e-08 61.6 120 31.7
TAR636G2135 Trochodendron aralioides HOM05D002638 ORTHO05D002821 5.2e-08 61.6 114 36.0
Gorai.013G016600 Gossypium raimondii HOM05D002638 ORTHO05D002821 6.7e-08 61.2 127 31.5
TPR.G30430 Trifolium pratense HOM05D002638 ORTHO05D002821 6.7e-08 61.2 96 35.4
CANSAT56G4382 Cannabis sativa HOM05D002638 ORTHO05D002821 8.8e-08 60.8 126 34.9
FAN06G3888 Fragaria x ananassa HOM05D002655 ORTHO05D002558 8.8e-08 60.8 127 31.5
Gohir.A06G160150 Gossypium hirsutum HOM05D002638 ORTHO05D002821 8.8e-08 60.8 86 38.4
Gohir.D13G015200 Gossypium hirsutum HOM05D002638 ORTHO05D002821 8.8e-08 60.8 127 31.5
CSS0039843 Camellia sinensis var. sinensis HOM05D002638 ORTHO05D002821 1.2e-07 60.5 83 38.6
Haze_17293 Corylus avellana HOM05D002655 ORTHO05D002558 1.2e-07 60.5 106 34.9
vmacro09993 Vaccinium macrocarpon HOM05D002638 ORTHO05D002821 1.2e-07 60.5 95 40.0
SGA_v2.0_scaffold2629G54166 Striga asiatica HOM05D002638 ORTHO05D002821 1.5e-07 60.1 105 35.2
FAN10G3508 Fragaria x ananassa HOM05D002638 ORTHO05D002821 2.0e-07 59.7 127 32.3
Oeu043158.1 Olea europaea HOM05D002638 ORTHO05D002821 2.0e-07 59.7 125 31.2
AUR62012319 Chenopodium quinoa HOM05D002638 ORTHO05D002821 2.6e-07 59.3 72 43.1
FAN03G1220 Fragaria x ananassa HOM05D002655 ORTHO05D002558 2.6e-07 59.3 127 32.3
Duzib106G0950 Durio zibethinus HOM05D002638 ORTHO05D002821 3.3e-07 58.9 88 34.1
Lalb_Chr22g0359761 Lupinus albus HOM05D002638 ORTHO05D002821 3.3e-07 58.9 92 34.8
PGR044G0146 Punica granatum HOM05D002638 ORTHO05D002821 3.3e-07 58.9 107 30.8
SalBow3G2464 Salvia bowleyana HOM05D002638 ORTHO05D002821 3.3e-07 58.9 77 39.0
vmacro06939 Vaccinium macrocarpon HOM05D002638 ORTHO05D002821 3.3e-07 58.9 60 50.0
Sabra10G0140500 Salix brachista HOM05D002638 ORTHO05D002821 4.4e-07 58.5 81 40.7
Thecc.10G008900 Theobroma cacao HOM05D002638 ORTHO05D002821 4.4e-07 58.5 98 34.7
Eucgr.J00164 Eucalyptus grandis HOM05D002638 ORTHO05D002821 5.7e-07 58.2 99 32.3
RcHm_v2.0_Chr1g0371301 Rosa chinensis HOM05D002638 ORTHO05D002821 5.7e-07 58.2 127 30.7
CsaV3_6G002040 Cucumis sativus L. HOM05D002638 ORTHO05D002821 7.5e-07 57.8 106 33.0
MD01G1159900 Malus domestica HOM05D002638 ORTHO05D002821 7.5e-07 57.8 100 34.0
MD07G1228300 Malus domestica HOM05D002638 ORTHO05D002821 7.5e-07 57.8 100 36.0
Gohir.D13G015100 Gossypium hirsutum HOM05D002638 ORTHO05D002821 1.3e-06 57.0 98 34.7
PSO384G0763 Papaver somniferum HOM05D002638 ORTHO05D002821 2.2e-06 56.2 85 38.8
Gohir.A13G014000 Gossypium hirsutum HOM05D002638 ORTHO05D002821 2.8e-06 55.8 127 29.9
PSO339G1968 Papaver somniferum HOM05D002638 ORTHO05D002821 2.8e-06 55.8 85 37.6
Manes.07G135900 Manihot esculenta HOM05D002638 ORTHO05D002821 3.7e-06 55.5 102 36.3
Manes.10G007300 Manihot esculenta HOM05D002638 ORTHO05D002821 3.7e-06 55.5 98 36.7
CiPaw.02G196600 Carya illinoinensis HOM05D002638 ORTHO05D002821 4.8e-06 55.1 91 36.3
COL.COLO4_25808 Corchorus olitorius HOM05D002655 ORTHO05D002558 4.8e-06 55.1 105 36.2
Duzib114G0210 Durio zibethinus HOM05D002638 ORTHO05D002821 4.8e-06 55.1 77 37.7
Gohir.A13G013900 Gossypium hirsutum HOM05D002638 ORTHO05D002821 4.8e-06 55.1 127 30.7
Lsat_1_v5_gn_9_60641 Lactuca sativa HOM05D002638 ORTHO05D002821 6.3e-06 54.7 97 34.0
Actinidia29733 Actinidia chinensis HOM05D002638 ORTHO05D002821 8.2e-06 54.3 74 41.9
HanXRQChr14g0458781 Helianthus annuus HOM05D002638 ORTHO05D002821 8.2e-06 54.3 97 30.9
Rhsim03G0148000 Rhododendron simsii HOM05D002638 ORTHO05D002821 8.2e-06 54.3 80 40.0


User provided reference genes

Program Settings