Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 9.3e-80 300.4 186 100.0
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 5.8e-74 281.2 186 88.2
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 9.7e-61 237.3 189 80.4
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 2.1e-55 219.5 189 72.5
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.4e-54 216.9 189 82.5
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.4e-51 206.8 195 79.5
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 1.1e-43 180.6 256 59.4
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 2.6e-42 176.0 111 81.1
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 5.0e-41 171.8 172 54.1
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 1.5e-40 170.2 187 67.4
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 5.5e-40 168.3 109 75.2
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 9.4e-40 167.5 175 64.6
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 2.1e-39 166.4 106 78.3
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.0e-38 164.1 108 76.9
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 3.0e-38 162.5 111 74.8
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.5e-37 160.2 112 71.4
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 2.0e-37 159.8 111 71.2
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.6e-37 159.5 111 74.8
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 3.3e-37 159.1 110 70.9
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 3.3e-37 159.1 105 74.3
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 4.4e-37 158.7 111 72.1
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 5.7e-37 158.3 109 72.5
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 5.7e-37 158.3 105 72.4
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 9.7e-37 157.5 113 70.8
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.2e-36 156.4 106 72.6
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 3.7e-36 155.6 111 71.2
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 3.7e-36 155.6 106 75.5
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 3.7e-36 155.6 106 72.6
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 3.7e-36 155.6 106 72.6
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.7e-36 155.6 104 73.1
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 8.3e-36 154.5 194 51.5
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 8.3e-36 154.5 111 68.5
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 1.4e-35 153.7 111 70.3
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 1.8e-35 153.3 109 70.6
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 2.4e-35 152.9 110 69.1
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 3.1e-35 152.5 106 69.8
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 7.0e-35 151.4 192 50.5
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 7.0e-35 151.4 112 72.3
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 9.1e-35 151.0 100 74.0
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 9.1e-35 151.0 99 76.8
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 9.1e-35 151.0 111 69.4
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 2.0e-34 149.8 103 71.8
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 2.0e-34 149.8 109 70.6
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 2.7e-34 149.4 99 73.7
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 2.7e-34 149.4 199 49.7
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 3.5e-34 149.1 103 70.9
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.7e-33 146.7 109 69.7
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 2.9e-33 146.0 111 64.0
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 6.5e-33 144.8 99 76.8
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.1e-32 144.1 194 47.4
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.5e-32 143.7 181 51.4
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 3.2e-32 142.5 105 71.4
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.2e-32 142.1 111 63.1
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.2e-32 142.1 108 63.0
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.2e-32 142.1 111 62.2
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 5.5e-32 141.7 111 64.0
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 7.2e-32 141.4 108 63.0
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.2e-32 141.4 111 61.3
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.2e-32 141.4 111 61.3
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.6e-31 140.2 111 61.3
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 3.6e-31 139.0 110 65.5
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 6.1e-31 138.3 106 65.1
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.4e-30 137.1 107 66.4
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.8e-30 136.7 108 61.1
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.8e-30 136.7 112 60.7
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 3.0e-30 136.0 111 62.2
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 4.0e-30 135.6 105 64.8
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 4.0e-30 135.6 110 63.6
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 6.8e-30 134.8 110 60.0
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 1.2e-29 134.0 188 46.8
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 1.5e-29 133.7 112 58.0
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 2.0e-29 133.3 187 45.5
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 2.0e-29 133.3 187 53.5
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 2.0e-29 133.3 187 45.5
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 2.0e-29 133.3 187 45.5
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 3.4e-29 132.5 105 61.0
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 7.5e-29 131.3 111 60.4
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 7.5e-29 131.3 105 61.9
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 9.8e-29 131.0 111 59.5
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 1.7e-28 130.2 105 61.0
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.2e-28 129.8 107 59.8
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 1.1e-27 127.5 105 61.0
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.8e-27 126.7 187 43.9
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 2.0e-26 123.2 103 60.2
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 4.5e-26 122.1 106 57.5
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 5.9e-26 121.7 116 59.5
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 1.7e-25 120.2 86 68.6
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 2.3e-25 119.8 106 55.7
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.1e-24 117.5 100 60.0
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 8.9e-22 107.8 102 58.8
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 2.4e-19 99.8 68 69.1
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 2.3e-17 93.2 194 37.6
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 3.9e-17 92.4 98 54.1
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 2.3e-14 83.2 95 45.3
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 8.9e-14 81.3 96 45.8
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.5e-13 80.5 45 80.0
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.0e-13 80.1 53 69.8
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 2.9e-12 76.3 134 43.3
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 2.9e-12 76.3 134 43.3
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 2.9e-12 76.3 63 63.5
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 4.1e-11 72.4 90 44.4
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 4.1e-11 72.4 85 45.9
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 9.2e-11 71.2 62 58.1
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 3.9e-09 65.9 59 61.0
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.1e-08 64.3 62 58.1
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.9e-08 63.5 65 55.4
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.1e-06 57.8 131 36.6


User provided reference genes

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