Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000072g0480 Nicotiana tabacum HOM05D005662 ORTHO05D007004 3.8e-131 471.5 233 100.0
Nitab4.5_0000481g0050 Nicotiana tabacum HOM05D005662 ORTHO05D007004 2.2e-123 445.7 230 97.0
Sopen03g023350 Solanum pennellii HOM05D005662 ORTHO05D007004 2.5e-114 415.6 229 90.0
Solyc03g083540.3 Solanum lycopersicum HOM05D005662 ORTHO05D007004 1.6e-113 412.9 229 89.5
PGSC0003DMG400023012 Solanum tuberosum HOM05D005662 ORTHO05D007004 3.7e-110 401.7 229 86.9
Peaxi162Scf01372g00048 Petunia axillaris HOM05D005662 ORTHO05D007004 2.0e-108 396.0 229 87.3
TWI39G1176 Tripterygium wilfordii HOM05D005662 ORTHO05D007004 1.2e-89 333.6 223 71.3
MSTRG.8809 Avicennia marina HOM05D005662 ORTHO05D007004 1.6e-89 333.2 230 72.6
Dinv22971 Davidia involucrata HOM05D005662 ORTHO05D007004 1.1e-88 330.5 229 72.9
CANSAT56G2670 Cannabis sativa HOM05D005662 ORTHO05D007004 1.4e-88 330.1 228 69.7
Cc02_g04010 Coffea canephora HOM05D005662 ORTHO05D007004 2.6e-87 325.9 230 71.7
Potri.015G129900 Populus trichocarpa HOM05D005662 ORTHO05D007004 2.6e-87 325.9 231 70.6
QL09p018886 Quercus lobata HOM05D005662 ORTHO05D007004 2.9e-86 322.4 227 70.9
Manes.06G137000 Manihot esculenta HOM05D005662 ORTHO05D007004 6.4e-86 321.2 229 69.0
Potri.012G128500 Populus trichocarpa HOM05D005662 ORTHO05D007004 5.4e-85 318.2 230 69.6
CiPaw.03G096300 Carya illinoinensis HOM05D005662 ORTHO05D007004 1.6e-84 316.6 229 69.0
COL.COLO4_14166 Corchorus olitorius HOM05D005662 ORTHO05D007004 1.6e-84 316.6 228 67.5
Gohir.D07G210500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 2.1e-84 316.2 230 67.4
Gorai.001G237900 Gossypium raimondii HOM05D005662 ORTHO05D007004 2.1e-84 316.2 230 67.4
MD07G1257000 Malus domestica HOM05D005662 ORTHO05D007004 2.1e-84 316.2 231 68.4
Dinv28543 Davidia involucrata HOM05D005662 ORTHO05D007004 2.7e-84 315.8 231 71.4
Thecc.03G160400 Theobroma cacao HOM05D005662 ORTHO05D007004 3.5e-84 315.5 227 69.2
Gohir.A07G204500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 6.0e-84 314.7 229 66.4
SalBow4G2223 Salvia bowleyana HOM05D005662 ORTHO05D007004 6.0e-84 314.7 230 68.7
SalBow4G3324 Salvia bowleyana HOM05D005662 ORTHO05D007004 6.0e-84 314.7 230 68.7
GSVIVG01018540001 Vitis vinifera HOM05D005662 ORTHO05D007004 1.0e-83 313.9 227 69.2
Hma1.2p1_0654F.1_g196460 Hydrangea macrophylla HOM05D005662 ORTHO05D007004 1.7e-83 313.2 229 68.6
Lsat_1_v5_gn_8_9401 Lactuca sativa HOM05D005662 ORTHO05D007004 3.0e-83 312.4 231 67.5
MD01G1184800 Malus domestica HOM05D005662 ORTHO05D007004 3.9e-83 312.0 231 65.8
Actinidia25029 Actinidia chinensis HOM05D005662 ORTHO05D007004 1.5e-82 310.1 230 66.5
Atru.chr1.651 Acer truncatum HOM05D005662 ORTHO05D007004 2.5e-82 309.3 230 68.3
Ciclev10005797m.g Citrus clementina HOM05D005662 ORTHO05D007004 2.5e-82 309.3 229 67.2
Duzib205G1232 Durio zibethinus HOM05D005662 ORTHO05D007004 2.5e-82 309.3 236 65.3
FvH4_7g28050 Fragaria vesca HOM05D005662 ORTHO05D007004 2.5e-82 309.3 231 69.3
TAR374G0299 Trochodendron aralioides HOM05D005662 ORTHO05D007004 3.3e-82 308.9 232 65.9
RcHm_v2.0_Chr1g0374961 Rosa chinensis HOM05D005662 ORTHO05D007004 5.6e-82 308.1 233 68.2
Migut.F00442 Erythranthe guttata HOM05D005662 ORTHO05D007004 7.3e-82 307.8 230 68.3
MBI12_g31644_MAGBIO Magnolia biondii HOM05D005662 ORTHO05D007004 9.5e-82 307.4 229 66.4
Prupe.2G281200 Prunus persica HOM05D005662 ORTHO05D007004 1.2e-81 307.0 231 68.4
CSS0015308 Camellia sinensis var. sinensis HOM05D005662 ORTHO05D007004 1.6e-81 306.6 231 66.7
vmacro06774 Vaccinium macrocarpon HOM05D005662 ORTHO05D007004 3.6e-81 305.4 229 68.6
HanXRQChr08g0223561 Helianthus annuus HOM05D005662 ORTHO05D007004 6.2e-81 304.7 229 69.4
THA.LOC104821401 Tarenaya hassleriana HOM05D005662 ORTHO05D007004 8.1e-81 304.3 225 68.0
SGA_v2.0_scaffold2G01165 Striga asiatica HOM05D005662 ORTHO05D007004 1.4e-80 303.5 234 66.7
ECA232G3412 Erigeron canadensis HOM05D005662 ORTHO05D007004 3.1e-80 302.4 228 68.0
Eucgr.K00149 Eucalyptus grandis HOM05D005662 ORTHO05D007004 4.0e-80 302.0 231 66.2
Nn4g26371 Nelumbo nucifera HOM05D005662 ORTHO05D007004 4.0e-80 302.0 230 67.0
Oeu039209.1 Olea europaea HOM05D005662 ORTHO05D007004 4.9e-78 295.0 209 70.8
PGR142G0586 Punica granatum HOM05D005662 ORTHO05D007004 4.9e-78 295.0 228 63.2
SGA_v2.0_scaffold486G52387 Striga asiatica HOM05D005662 ORTHO05D007004 4.9e-78 295.0 231 65.8
Actinidia13561 Actinidia chinensis HOM05D005662 ORTHO05D007004 6.4e-78 294.7 221 66.1
DCAR_015743 Daucus carota HOM05D005662 ORTHO05D007004 2.4e-77 292.7 227 65.6
Sabra12G0096500 Salix brachista HOM05D005662 ORTHO05D007004 4.6e-76 288.5 206 69.9
TAR375G0912 Trochodendron aralioides HOM05D005662 ORTHO05D007004 1.7e-75 286.6 220 65.5
Carub.0008s2298 Capsella rubella HOM05D005662 ORTHO05D007004 3.9e-75 285.4 232 62.5
Thhalv10004861m.g Eutrema salsugineum HOM05D005662 ORTHO05D007004 6.6e-75 284.6 229 63.3
Ca_30761_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 1.1e-74 283.9 217 65.0
HanXRQChr16g0512531 Helianthus annuus HOM05D005662 ORTHO05D007004 3.3e-74 282.3 230 63.9
Duzib084G0609 Durio zibethinus HOM05D005662 ORTHO05D007004 5.6e-74 281.6 227 62.6
Sp2g25490 Schrenkiella parvula HOM05D005662 ORTHO05D007004 1.2e-73 280.4 225 63.1
CARHR276070 Cardamine hirsuta HOM05D005662 ORTHO05D007004 1.1e-72 277.3 234 61.5
EL10Ac3g05805 Beta vulgaris HOM05D005662 ORTHO05D007004 1.8e-72 276.6 228 62.3
AL8G39110 Arabidopsis lyrata HOM05D005662 ORTHO05D007004 2.4e-72 276.2 230 61.7
AT5G62290 Arabidopsis thaliana HOM05D005662 ORTHO05D007004 5.2e-72 275.0 231 59.7
Medtr4g033850 Medicago truncatula HOM05D005662 ORTHO05D007004 2.6e-71 272.7 218 62.8
Aqoxy7G00656 Aquilegia oxysepala HOM05D005662 ORTHO05D007004 3.4e-71 272.3 243 57.2
unitig_37.g12504 Utricularia gibba HOM05D005662 ORTHO05D007004 2.2e-70 269.6 211 65.9
CDE02G0217 Ceratophyllum demersum HOM05D005662 ORTHO05D007004 2.9e-70 269.2 231 59.7
Phvul.011G004300 Phaseolus vulgaris HOM05D005662 ORTHO05D007004 4.9e-70 268.5 216 63.9
MELO3C005412.2 Cucumis melo HOM05D005662 ORTHO05D007004 8.4e-70 267.7 235 60.9
Hund04625 Selenicereus undatus HOM05D005662 ORTHO05D007004 1.9e-69 266.5 210 63.8
arahy.Tifrunner.gnm1.ann1.TMT042 Arachis hypogaea HOM05D005662 ORTHO05D007004 5.4e-69 265.0 228 61.8
VMungo1127G2067 Vigna mungo HOM05D005662 ORTHO05D007004 5.4e-69 265.0 216 62.5
arahy.Tifrunner.gnm1.ann1.93Q1AU Arachis hypogaea HOM05D005662 ORTHO05D007004 7.1e-69 264.6 228 62.3
Rhsim03G0170700 Rhododendron simsii HOM05D005662 ORTHO05D007004 7.1e-69 264.6 282 52.8
Glyma.09G233200 Glycine max HOM05D005662 ORTHO05D007004 9.3e-69 264.2 209 65.6
C02p62090 Brassica napus HOM05D005662 ORTHO05D007004 4.6e-68 261.9 231 58.9
Psat7g191960 Pisum sativum HOM05D005662 ORTHO05D007004 4.6e-68 261.9 217 60.4
BcaB07g29785 Brassica carinata HOM05D005662 ORTHO05D007004 7.8e-68 261.2 233 58.8
Lalb_Chr15g0077021 Lupinus albus HOM05D005662 ORTHO05D007004 7.8e-68 261.2 221 60.2
Sed0027239 Sechium edule HOM05D005662 ORTHO05D007004 1.0e-67 260.8 235 59.1
arahy.Tifrunner.gnm1.ann1.QSR7PX Arachis hypogaea HOM05D005662 ORTHO05D007004 1.7e-67 260.0 228 61.4
Aa31LG11G1300 Aethionema arabicum HOM05D005662 ORTHO05D007004 2.3e-67 259.6 230 58.7
A02p42240 Brassica napus HOM05D005662 ORTHO05D007004 2.3e-67 259.6 232 59.1
TPR.G15119 Trifolium pratense HOM05D005662 ORTHO05D007004 3.9e-67 258.8 216 58.3
arahy.Tifrunner.gnm1.ann1.LZP622 Arachis hypogaea HOM05D005662 ORTHO05D007004 6.6e-67 258.1 228 61.4
Lalb_Chr04g0260971 Lupinus albus HOM05D005662 ORTHO05D007004 3.3e-66 255.8 228 57.9
BolC3t18716H Brassica oleracea HOM05D005662 ORTHO05D007004 7.3e-66 254.6 235 59.6
Lj3g0023650 Lotus japonicus HOM05D005662 ORTHO05D007004 9.6e-66 254.2 236 56.4
HPP92_004603 Vanilla planifolia HOM05D005662 ORTHO05D007004 2.1e-65 253.1 228 58.8
Glyma.14G044000 Glycine max HOM05D005662 ORTHO05D007004 2.8e-65 252.7 216 60.2
ClCG01G005160 Citrullus lanatus HOM05D005662 ORTHO05D007004 1.1e-64 250.8 276 52.9
PSO478G4436 Papaver somniferum HOM05D005662 ORTHO05D007004 2.4e-64 249.6 229 55.9
PSO782G3258 Papaver somniferum HOM05D005662 ORTHO05D007004 3.1e-64 249.2 229 55.5
BraA06t25849Z Brassica rapa HOM05D005662 ORTHO05D007004 1.5e-63 246.9 239 56.9
BraA02t09152Z Brassica rapa HOM05D005662 ORTHO05D007004 1.9e-61 240.0 247 53.4
ATR0733G084 Amborella trichopoda HOM05D005662 ORTHO05D007004 2.7e-60 236.1 226 54.4
Sed0014362 Sechium edule HOM05D005662 ORTHO05D007004 1.1e-58 230.7 233 57.5
C03p64570 Brassica napus HOM05D000207 ORTHO05D001482 1.6e-57 226.9 211 58.8
Haze_13835 Corylus avellana HOM05D005662 ORTHO05D007004 9.0e-56 221.1 228 52.2
Ca_00244_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 1.5e-55 220.3 162 65.4
A06p29040 Brassica napus HOM05D000207 ORTHO05D001482 2.0e-55 219.9 214 56.1
CAN.G152.22 Capsicum annuum HOM05D005662 ORTHO05D007004 2.6e-55 219.5 135 84.4
SEGI_33447 Sequoiadendron giganteum HOM05D005662 ORTHO05D007004 5.1e-51 205.3 222 51.8
AUR62016115 Chenopodium quinoa HOM05D005662 ORTHO05D007004 2.5e-50 203.0 231 48.9
Os10g0170000 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 2.5e-50 203.0 228 48.2
Atru.chr1.654 Acer truncatum HOM05D005662 ORTHO05D007004 2.8e-49 199.5 168 63.1
Cfa008223 Carpinus fangiana HOM05D000922 ORTHO05D007004 2.4e-48 196.4 168 60.1
Os03g0249300 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 3.1e-48 196.1 233 45.9
Zm00001eb010690 Zea mays HOM05D005662 ORTHO05D007004 3.0e-43 179.5 263 40.7
SMO351G0592 Selaginella moellendorffii HOM05D005662 ORTHO05D007004 5.1e-43 178.7 225 45.3
Zm00001eb224250 Zea mays HOM05D005662 ORTHO05D007004 5.1e-43 178.7 234 44.0
Sabra15G0143400 Salix brachista HOM05D005662 ORTHO05D007004 3.3e-42 176.0 174 51.7
Pp3c5_5760 Physcomitrium patens HOM05D005662 ORTHO05D007004 6.3e-41 171.8 231 45.9
Pp3c16_14910 Physcomitrium patens HOM05D005662 ORTHO05D007004 3.1e-40 169.5 234 42.7
PSO063G7367 Papaver somniferum HOM05D005662 ORTHO05D007004 4.5e-39 165.6 130 60.8
Sc13g0007790 Simmondsia chinensis HOM05D005662 ORTHO05D007004 4.5e-39 165.6 136 61.0
Mapoly0005s0155 Marchantia polymorpha HOM05D005662 ORTHO05D007004 1.1e-37 161.0 226 41.6
CBR_g40194 Chara braunii HOM05D005662 ORTHO05D007004 1.9e-37 160.2 249 41.8
Lsat_1_v5_gn_9_52481 Lactuca sativa HOM05D005662 ORTHO05D007004 3.2e-37 159.5 211 46.4
Cpa.g.sc130.1 Carica papaya HOM05D005662 ORTHO05D007004 3.6e-36 156.0 93 76.3
Ah.13g067320 Amaranthus hybridus HOM05D005662 ORTHO05D007004 6.9e-32 141.7 93 67.7
AUR62035061 Chenopodium quinoa HOM05D005662 ORTHO05D007004 7.7e-31 138.3 103 65.0
DCAR_018618 Daucus carota HOM05D005662 ORTHO05D007004 1.2e-28 131.0 138 55.1
Ah.13g067330 Amaranthus hybridus HOM05D005662 ORTHO05D007004 6.1e-28 128.6 99 66.7
BcaC03g18141 Brassica carinata HOM05D000207 ORTHO05D001482 6.1e-28 128.6 105 63.8
AagrBONN_evm.TU.Sc2ySwM_368.1564 Anthoceros agrestis HOM05D005662 ORTHO05D007004 3.9e-27 125.9 141 51.8
PRCOL_00002770 Prasinoderma coloniale HOM05D005662 ORTHO05D007004 4.1e-24 115.9 153 43.8
Cre12.g538150 Chlamydomonas reinhardtii HOM05D005662 ORTHO05D007004 2.1e-20 103.6 150 37.3
Solyc06g011630.1 Solanum lycopersicum HOM05D005662 ORTHO05D007004 2.7e-20 103.2 55 87.3
DCAR_021652 Daucus carota HOM05D000949 ORTHO05D001276 1.1e-18 97.8 114 50.9
Ciclev10006356m.g Citrus clementina HOM05D005662 ORTHO05D007004 8.2e-17 91.7 74 62.2
arahy.Tifrunner.gnm1.ann1.6UH5I2 Arachis hypogaea HOM05D005662 ORTHO05D007004 4.1e-16 89.4 132 43.2
DCAR_023430 Daucus carota HOM05D005662 ORTHO05D004064 5.3e-16 89.0 73 61.6
MCO15G129 Micromonas commoda HOM05D005662 ORTHO05D007004 2.6e-15 86.7 188 30.9
COL.COLO4_29300 Corchorus olitorius HOM05D005662 ORTHO05D007004 3.8e-14 82.8 109 41.3
Thecc.03G160100 Theobroma cacao HOM05D005662 ORTHO05D007004 3.8e-14 82.8 130 40.8
FvH4_3g21360 Fragaria vesca HOM05D005731 ORTHO05D012104 8.0e-12 75.1 86 50.0
DCAR_026119 Daucus carota HOM05D000323 ORTHO05D000201 2.3e-11 73.6 101 46.5
arahy.Tifrunner.gnm1.ann1.8PDC51 Arachis hypogaea HOM05D005662 ORTHO05D007004 1.5e-10 70.9 94 45.7


User provided reference genes

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