Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 5.8e-170 600.9 326 100.0
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 2.2e-161 572.4 337 90.5
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 1.1e-136 490.3 329 80.9
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 2.0e-130 469.5 331 80.7
PGSC0003DMG400031012 Solanum tuberosum HOM05D007548 ORTHO05D009527 2.7e-122 442.6 330 77.9
Solyc03g007080.4 Solanum lycopersicum HOM05D007548 ORTHO05D009527 8.9e-102 374.4 298 68.5
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 2.0e-53 213.8 324 46.6
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 1.1e-51 208.0 320 48.1
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 1.4e-51 207.6 320 47.8
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 4.6e-50 202.6 330 48.8
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 2.5e-48 196.8 326 47.5
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 3.7e-47 193.0 315 45.7
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 4.8e-47 192.6 322 42.5
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 2.4e-46 190.3 322 43.8
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 3.4e-45 186.4 327 44.0
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 1.0e-44 184.9 323 44.0
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 5.0e-44 182.6 319 42.9
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 1.9e-43 180.6 310 44.5
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.9e-43 180.6 310 44.5
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.9e-43 180.6 310 44.5
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 3.2e-43 179.9 318 40.9
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 5.5e-43 179.1 332 44.3
Atru.chr1.619 Acer truncatum HOM05D007548 ORTHO05D009527 7.9e-42 175.3 287 47.0
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 2.3e-41 173.7 318 40.6
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.3e-41 173.7 311 43.7
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 2.3e-41 173.7 318 43.1
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 5.1e-41 172.6 329 43.8
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 2.8e-39 166.8 275 44.4
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 2.8e-39 166.8 344 40.4
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 2.4e-38 163.7 317 43.2
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 3.1e-38 163.3 318 40.6
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 6.9e-38 162.2 326 43.3
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 3.8e-36 156.4 329 41.3
Gohir.D12G264100 Gossypium hirsutum HOM05D007548 ORTHO05D009527 1.8e-33 147.5 322 35.7
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 3.9e-33 146.4 318 39.6
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 1.5e-32 144.4 287 41.8
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 2.0e-32 144.1 281 43.4
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 4.4e-32 142.9 278 42.8
Gorai.008G283300 Gossypium raimondii HOM05D007548 ORTHO05D009527 7.4e-32 142.1 312 40.7
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 2.2e-31 140.6 276 43.5
Glyma.10G242400 Glycine max HOM05D007548 ORTHO05D009527 6.3e-31 139.0 311 39.2
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 9.1e-30 135.2 270 45.2
PGR142G1046 Punica granatum HOM05D007548 ORTHO05D009527 1.3e-28 131.3 359 34.0
Glyma.20G151700 Glycine max HOM05D007548 ORTHO05D009527 1.2e-26 124.8 321 37.4
SGA_v2.0_scaffold2G01130 Striga asiatica HOM05D007548 ORTHO05D009527 3.6e-26 123.2 305 38.0
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 6.1e-26 122.5 279 41.9
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 6.1e-26 122.5 315 38.7
Manes.14G032600 Manihot esculenta HOM05D007548 ORTHO05D009527 6.1e-26 122.5 286 35.7
Medtr1g102510 Medicago truncatula HOM05D007548 ORTHO05D009527 6.1e-26 122.5 312 40.1
GSVIVG01018495001 Vitis vinifera HOM05D007548 ORTHO05D009527 1.4e-25 121.3 169 54.4
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 3.9e-25 119.8 332 36.4
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 1.5e-24 117.9 285 38.2
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 1.5e-24 117.9 345 35.9
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 4.4e-24 116.3 317 35.3
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 5.7e-24 115.9 340 32.9
Phvul.007G063100 Phaseolus vulgaris HOM05D007548 ORTHO05D009527 8.2e-23 112.1 308 39.3
CARHR264530 Cardamine hirsuta HOM05D007548 ORTHO05D009527 1.8e-22 110.9 341 34.6
Lsat_1_v5_gn_8_8041 Lactuca sativa HOM05D007548 ORTHO05D009527 3.1e-22 110.2 323 36.5
AL8G25930 Arabidopsis lyrata HOM05D007548 ORTHO05D009527 4.1e-22 109.8 351 34.2
Aa31LG3G8110 Aethionema arabicum HOM05D007548 ORTHO05D009527 5.3e-22 109.4 367 33.8
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 7.0e-22 109.0 222 40.1
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 9.1e-22 108.6 326 38.3
PSO782G0883 Papaver somniferum HOM05D007548 ORTHO05D009527 9.1e-22 108.6 326 32.8
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 1.6e-21 107.8 325 36.0
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 1.6e-21 107.8 306 33.7
AT5G51680 Arabidopsis thaliana HOM05D007548 ORTHO05D009527 5.9e-21 105.9 335 33.1
SGA_v2.0_scaffold486G52377 Striga asiatica HOM05D007548 ORTHO05D009527 7.7e-21 105.5 321 35.5
Carub.0008s1170 Capsella rubella HOM05D007548 ORTHO05D009527 2.2e-20 104.0 339 34.2
Thhalv10014011m.g Eutrema salsugineum HOM05D007548 ORTHO05D009527 2.9e-20 103.6 340 32.9
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 1.9e-19 100.9 323 35.0
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 3.2e-19 100.1 285 34.7
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 4.2e-19 99.8 218 41.7
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 9.4e-19 98.6 316 37.0
ECA233G0652 Erigeron canadensis HOM05D007548 ORTHO05D009527 1.6e-18 97.8 331 35.6
VMungo0720G2396 Vigna mungo HOM05D007548 ORTHO05D009527 1.6e-18 97.8 282 37.2
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 4.7e-18 96.3 310 35.5
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 1.8e-17 94.4 272 36.8
Sp6g13900 Schrenkiella parvula HOM05D007548 ORTHO05D009527 1.7e-15 87.8 194 36.1
Lalb_Chr21g0304861 Lupinus albus HOM05D007548 ORTHO05D009527 1.4e-14 84.7 291 34.0
BcaC04g20644 Brassica carinata HOM05D007548 ORTHO05D009527 7.7e-13 79.0 351 31.1
C09p41110 Brassica napus HOM05D007548 ORTHO05D009527 7.7e-13 79.0 351 31.1
BolC9t56989H Brassica oleracea HOM05D007548 ORTHO05D009527 7.7e-13 79.0 351 31.1
BraA10t43031Z Brassica rapa HOM05D007548 ORTHO05D009527 2.2e-12 77.4 345 29.9
Aqoxy7G00579 Aquilegia oxysepala HOM05D007548 ORTHO05D009527 2.9e-12 77.0 358 30.2
arahy.Tifrunner.gnm1.ann1.J4U887 Arachis hypogaea HOM05D001870 ORTHO05D001797 8.5e-12 75.5 280 32.5
arahy.Tifrunner.gnm1.ann1.WA56KQ Arachis hypogaea HOM05D001870 ORTHO05D001797 8.5e-12 75.5 307 30.9
A10p09560 Brassica napus HOM05D007548 ORTHO05D009527 1.5e-11 74.7 346 29.8
TPR.G26079 Trifolium pratense HOM05D007548 ORTHO05D009527 1.5e-11 74.7 313 32.9
BcaB08g35518 Brassica carinata HOM05D007548 ORTHO05D009527 1.6e-10 71.2 336 29.5
FAN10G1395 Fragaria x ananassa HOM05D007548 ORTHO05D009527 6.8e-09 65.9 184 36.4
Ah.13g067520 Amaranthus hybridus HOM05D007548 ORTHO05D009527 8.3e-07 58.9 303 31.4


User provided reference genes

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