Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000072g0290 Nicotiana tabacum HOM05D000357 ORTHO05D000242 9.9e-55 216.5 104 100.0
Nitab4.5_0000072g0320 Nicotiana tabacum HOM05D000357 ORTHO05D000242 6.4e-46 187.2 102 88.2
Nitab4.5_0013050g0020 Nicotiana tabacum HOM05D000357 ORTHO05D000242 7.3e-42 173.7 102 85.3
Nitab4.5_0000072g0340 Nicotiana tabacum HOM05D000357 ORTHO05D000242 1.1e-40 169.9 125 71.2
Nitab4.5_0000072g0310 Nicotiana tabacum HOM05D000357 ORTHO05D000242 2.2e-38 162.2 124 69.4
Nitab4.5_0001095g0010 Nicotiana tabacum HOM05D000357 ORTHO05D000242 6.0e-28 127.5 126 57.1
Nitab4.5_0008495g0010 Nicotiana tabacum HOM05D000357 ORTHO05D000242 5.7e-26 120.9 102 65.7
PGSC0003DMG400036158 Solanum tuberosum HOM05D000357 ORTHO05D000242 7.6e-23 110.5 126 50.8
PGSC0003DMG400031013 Solanum tuberosum HOM05D000357 ORTHO05D000242 1.9e-21 105.9 123 50.4
Solyc07g055090.1 Solanum lycopersicum HOM05D000357 ORTHO05D000242 9.3e-21 103.6 119 50.4
PGSC0003DMG400037614 Solanum tuberosum HOM05D000357 ORTHO05D000242 1.2e-20 103.2 123 48.8
CAN.G1081.16 Capsicum annuum HOM05D000357 ORTHO05D000242 5.1e-19 97.8 129 45.7
Peaxi162Scf00192g00105 Petunia axillaris HOM05D000357 ORTHO05D000242 1.6e-17 92.8 127 44.1
Peaxi162Scf00192g01016 Petunia axillaris HOM05D000357 ORTHO05D000242 1.6e-17 92.8 127 44.1
Nitab4.5_0009892g0040 Nicotiana tabacum HOM05D000357 ORTHO05D000242 2.2e-17 92.4 107 52.3
CAN.G1736.5 Capsicum annuum HOM05D000357 ORTHO05D000242 6.3e-17 90.9 130 44.6
Peaxi162Scf00192g01017 Petunia axillaris HOM05D000357 ORTHO05D000242 1.8e-16 89.4 127 42.5
PGSC0003DMG400047330 Solanum tuberosum HOM05D000357 ORTHO05D000242 2.4e-16 89.0 124 42.7
Peaxi162Scf00192g00911 Petunia axillaris HOM05D000357 ORTHO05D000242 2.2e-14 82.4 105 45.7
TPR.G14335 Trifolium pratense HOM05D000357 ORTHO05D000242 1.4e-13 79.7 116 37.1
Cpa.g.sc107.19 Carica papaya HOM05D000357 ORTHO05D000242 7.2e-13 77.4 113 38.1
PGR004G2890 Punica granatum HOM05D000357 ORTHO05D000242 1.6e-12 76.3 145 32.4
Hma1.2p1_0654F.1_g196360 Hydrangea macrophylla HOM05D000357 ORTHO05D000242 2.1e-12 75.9 138 36.2
Manes.01G008400 Manihot esculenta HOM05D000357 ORTHO05D000242 3.6e-12 75.1 124 35.5
Eucgr.C03794 Eucalyptus grandis HOM05D000357 ORTHO05D000242 4.6e-12 74.7 143 34.3
Potri.015G131900 Populus trichocarpa HOM05D000357 ORTHO05D000242 4.6e-12 74.7 135 36.3
Medtr1g100773 Medicago truncatula HOM05D000357 ORTHO05D000242 6.1e-12 74.3 138 34.8
TPR.G6907 Trifolium pratense HOM05D000357 ORTHO05D000242 6.1e-12 74.3 129 37.2
DCAR_011064 Daucus carota HOM05D000357 ORTHO05D000242 1.0e-11 73.6 130 33.1
Dinv07996 Davidia involucrata HOM05D000357 ORTHO05D000242 1.0e-11 73.6 101 38.6
HanXRQChr14g0461761 Helianthus annuus HOM05D000357 ORTHO05D000242 1.0e-11 73.6 125 34.4
Psat0s2975g0160 Pisum sativum HOM05D000357 ORTHO05D000242 1.0e-11 73.6 135 33.3
Psat0s2975g0240 Pisum sativum HOM05D000357 ORTHO05D000242 1.0e-11 73.6 135 33.3
Hma1.2p1_0488F.1_g163990 Hydrangea macrophylla HOM05D000357 ORTHO05D000242 1.4e-11 73.2 138 34.8
Manes.01G017400 Manihot esculenta HOM05D000357 ORTHO05D000242 1.4e-11 73.2 125 36.8
HanXRQChr08g0225021 Helianthus annuus HOM05D000357 ORTHO05D000242 2.3e-11 72.4 125 35.2
Aqoxy7G00649 Aquilegia oxysepala HOM05D000357 ORTHO05D000242 3.9e-11 71.6 119 35.3
Medtr7g114920 Medicago truncatula HOM05D000357 ORTHO05D000242 5.1e-11 71.2 127 36.2
FAN10G3258 Fragaria x ananassa HOM05D000357 ORTHO05D000242 6.7e-11 70.9 124 36.3
MD02G1204600 Malus domestica HOM05D000357 ORTHO05D000242 6.7e-11 70.9 149 33.6
FvH4_7g11860 Fragaria vesca HOM05D000357 ORTHO05D000242 1.1e-10 70.1 124 36.3
FAN06G1596 Fragaria x ananassa HOM05D000357 ORTHO05D000242 1.1e-10 70.1 124 36.3
FAN10G2505 Fragaria x ananassa HOM05D000357 ORTHO05D000242 1.1e-10 70.1 124 36.3
Lsat_1_v5_gn_2_129721 Lactuca sativa HOM05D000357 ORTHO05D000242 1.1e-10 70.1 126 34.1
Oeu021731.1 Olea europaea HOM05D000357 ORTHO05D000242 1.1e-10 70.1 133 33.1
FAN01G2939 Fragaria x ananassa HOM05D000357 ORTHO05D000242 2.0e-10 69.3 124 36.3
FAN06G2971 Fragaria x ananassa HOM05D000357 ORTHO05D000242 2.0e-10 69.3 124 36.3
MD07G1258500 Malus domestica HOM05D000357 ORTHO05D000242 2.0e-10 69.3 136 31.6
Potri.012G130100 Populus trichocarpa HOM05D000357 ORTHO05D000242 2.0e-10 69.3 135 33.3
Thecc.01G087900 Theobroma cacao HOM05D000357 ORTHO05D000242 2.5e-10 68.9 125 36.0
MELO3C006837.2 Cucumis melo HOM05D000357 ORTHO05D000242 3.3e-10 68.6 129 34.1
GSVIVG01018497001 Vitis vinifera HOM05D000357 ORTHO05D000242 3.3e-10 68.6 146 34.9
CsaV3_3G016390 Cucumis sativus L. HOM05D000357 ORTHO05D000242 4.3e-10 68.2 131 35.1
COL.COLO4_14189 Corchorus olitorius HOM05D000357 ORTHO05D000242 5.7e-10 67.8 151 32.5
Lj8C30T14 Lonicera japonica HOM05D000357 ORTHO05D000242 5.7e-10 67.8 139 33.1
MD01G1186300 Malus domestica HOM05D000357 ORTHO05D000242 5.7e-10 67.8 137 30.7
DCAR_009436 Daucus carota HOM05D000357 ORTHO05D000242 7.4e-10 67.4 130 31.5
DCAR_009437 Daucus carota HOM05D000357 ORTHO05D000242 7.4e-10 67.4 130 31.5
Lj8C35T17 Lonicera japonica HOM05D000357 ORTHO05D000242 7.4e-10 67.4 148 29.7
Glyma.16G206800 Glycine max HOM05D000357 ORTHO05D000242 9.7e-10 67.0 135 31.1
VMungo0464G0271 Vigna mungo HOM05D000357 ORTHO05D000242 9.7e-10 67.0 136 28.7
Oeu006049.1 Olea europaea HOM05D000357 ORTHO05D000242 1.3e-09 66.6 133 33.1
CiPaw.03G040900 Carya illinoinensis HOM05D000357 ORTHO05D000242 1.7e-09 66.2 135 30.4
Potri.015G131500 Populus trichocarpa HOM05D000357 ORTHO05D000242 1.7e-09 66.2 125 33.6
Prupe.2G145200 Prunus persica HOM05D000357 ORTHO05D000242 1.7e-09 66.2 143 33.6
FAN06G1768 Fragaria x ananassa HOM05D000357 ORTHO05D000242 2.2e-09 65.9 141 31.2
RcHm_v2.0_Chr1g0375211 Rosa chinensis HOM05D000357 ORTHO05D000242 2.2e-09 65.9 138 32.6
Thecc.05G227200 Theobroma cacao HOM05D000357 ORTHO05D000242 2.2e-09 65.9 125 33.6
TWI39G0970 Tripterygium wilfordii HOM05D000357 ORTHO05D000242 2.2e-09 65.9 129 31.8
Aqoxy7G00588 Aquilegia oxysepala HOM05D000357 ORTHO05D000242 2.8e-09 65.5 120 35.8
COL.COLO4_15137 Corchorus olitorius HOM05D000357 ORTHO05D000242 2.8e-09 65.5 114 37.7
MELO3C031632.2 Cucumis melo HOM05D000357 ORTHO05D000242 2.8e-09 65.5 129 34.9
QL12p039618 Quercus lobata HOM05D000357 ORTHO05D000242 2.8e-09 65.5 126 31.7
Phvul.004G111000 Phaseolus vulgaris HOM05D000357 ORTHO05D000242 3.7e-09 65.1 143 32.2
FvH4_7g28230 Fragaria vesca HOM05D000357 ORTHO05D000242 4.8e-09 64.7 141 30.5
FAN01G1175 Fragaria x ananassa HOM05D000357 ORTHO05D000242 6.3e-09 64.3 141 31.2
COL.COLO4_37083 Corchorus olitorius HOM05D000357 ORTHO05D000242 1.1e-08 63.5 126 33.3
FAN03G2863 Fragaria x ananassa HOM05D000357 ORTHO05D000242 1.4e-08 63.2 102 39.2
Phvul.004G110301 Phaseolus vulgaris HOM05D000357 ORTHO05D000242 1.4e-08 63.2 143 30.8
Phvul.004G110600 Phaseolus vulgaris HOM05D000357 ORTHO05D000242 1.4e-08 63.2 143 32.9
RcHm_v2.0_Chr1g0350541 Rosa chinensis HOM05D000357 ORTHO05D000242 1.4e-08 63.2 148 31.8
FAN06G1536 Fragaria x ananassa HOM05D000357 ORTHO05D000242 1.8e-08 62.8 139 30.2
Phvul.004G111100 Phaseolus vulgaris HOM05D000357 ORTHO05D000242 1.8e-08 62.8 143 32.2
Potri.012G130000 Populus trichocarpa HOM05D000357 ORTHO05D000242 2.4e-08 62.4 144 29.9
SGA_v2.0_scaffold486G52378 Striga asiatica HOM05D000357 ORTHO05D000242 2.4e-08 62.4 121 33.9
CsaV3_3G016380 Cucumis sativus L. HOM05D000357 ORTHO05D000242 3.1e-08 62.0 127 34.6
Oeu028171.1 Olea europaea HOM05D000357 ORTHO05D000242 3.1e-08 62.0 132 30.3
BcaC01g04607 Brassica carinata HOM05D000357 ORTHO05D000242 4.1e-08 61.6 139 32.4
C03p35770 Brassica napus HOM05D000357 ORTHO05D000242 4.1e-08 61.6 122 33.6
TWI60G0799 Tripterygium wilfordii HOM05D000357 ORTHO05D000242 4.1e-08 61.6 146 32.2
BolC3t15885H Brassica oleracea HOM05D000357 ORTHO05D000242 6.9e-08 60.8 136 30.1
RcHm_v2.0_Chr3g0459841 Rosa chinensis HOM05D000357 ORTHO05D000242 6.9e-08 60.8 138 29.7
BcaB01g01711 Brassica carinata HOM05D000357 ORTHO05D000242 9.1e-08 60.5 152 30.3
BcaC04g21196 Brassica carinata HOM05D000357 ORTHO05D000242 9.1e-08 60.5 152 30.3
A09p27080 Brassica napus HOM05D000357 ORTHO05D000242 9.1e-08 60.5 152 30.3
C09p34430 Brassica napus HOM05D000357 ORTHO05D000242 9.1e-08 60.5 152 30.3
BolC9t56286H Brassica oleracea HOM05D000357 ORTHO05D000242 9.1e-08 60.5 152 30.3
Cc01_g01280 Coffea canephora HOM05D000357 ORTHO05D000242 9.1e-08 60.5 140 30.7
Solyc09g009590.1 Solanum lycopersicum HOM05D000357 ORTHO05D000242 9.1e-08 60.5 126 34.1
SGA_v2.0_scaffold2G01131 Striga asiatica HOM05D000357 ORTHO05D000242 9.1e-08 60.5 123 33.3
Duzib177G0304 Durio zibethinus HOM05D000357 ORTHO05D000242 1.2e-07 60.1 127 33.1
FAN03G0369 Fragaria x ananassa HOM05D000357 ORTHO05D000242 1.2e-07 60.1 148 28.4
Hma1.2p1_0084F.1_g043590 Hydrangea macrophylla HOM05D000357 ORTHO05D000242 1.2e-07 60.1 128 33.6
Hma1.2p1_0084F.1_g043613 Hydrangea macrophylla HOM05D000357 ORTHO05D000242 1.2e-07 60.1 128 33.6
Phvul.003G216400 Phaseolus vulgaris HOM05D000357 ORTHO05D000242 1.2e-07 60.1 121 33.1
DCAR_020223 Daucus carota HOM05D000337 ORTHO05D005067 1.5e-07 59.7 130 32.3
Dinv22935 Davidia involucrata HOM05D000357 ORTHO05D000242 1.5e-07 59.7 39 64.1
BraA09t38279Z Brassica rapa HOM05D000357 ORTHO05D000242 2.0e-07 59.3 152 29.6
CiPaw.11G145400 Carya illinoinensis HOM05D000357 ORTHO05D000242 2.0e-07 59.3 149 32.9
Cc08_g13480 Coffea canephora HOM05D000357 ORTHO05D000242 2.0e-07 59.3 140 30.0
Lj2g0003014 Lotus japonicus HOM05D000357 ORTHO05D000242 2.0e-07 59.3 132 30.3
PGR102G0145 Punica granatum HOM05D000357 ORTHO05D000242 2.0e-07 59.3 138 26.8
AL6G46840 Arabidopsis lyrata HOM05D000357 ORTHO05D000242 3.4e-07 58.5 151 27.8
FAN03G1485 Fragaria x ananassa HOM05D000357 ORTHO05D000242 3.4e-07 58.5 148 28.4
Glyma.09G156100 Glycine max HOM05D000357 ORTHO05D000242 3.4e-07 58.5 148 29.1
Sed0027544 Sechium edule HOM05D000357 ORTHO05D000242 3.4e-07 58.5 114 30.7
HPP92_019527 Vanilla planifolia HOM05D000357 ORTHO05D000242 3.4e-07 58.5 132 31.8
BcaB05g23775 Brassica carinata HOM05D000357 ORTHO05D000242 4.5e-07 58.2 149 30.2
A02p25940 Brassica napus HOM05D000357 ORTHO05D000242 4.5e-07 58.2 149 29.5
MD02G1204500 Malus domestica HOM05D000357 ORTHO05D000242 4.5e-07 58.2 148 29.1
TWI81G0651 Tripterygium wilfordii HOM05D000357 ORTHO05D000242 4.5e-07 58.2 146 30.1
BcaC03g16320 Brassica carinata HOM05D000357 ORTHO05D000242 5.9e-07 57.8 149 29.5
C02p41320 Brassica napus HOM05D000357 ORTHO05D000242 5.9e-07 57.8 149 29.5
BolC2t10154H Brassica oleracea HOM05D000357 ORTHO05D000242 5.9e-07 57.8 149 29.5
CDE02G1496 Ceratophyllum demersum HOM05D000357 ORTHO05D000242 5.9e-07 57.8 140 30.0
COL.COLO4_36500 Corchorus olitorius HOM05D000357 ORTHO05D000242 5.9e-07 57.8 121 35.5
Hma1.2p1_0232F.1_g097760 Hydrangea macrophylla HOM05D000357 ORTHO05D000242 5.9e-07 57.8 142 28.2
Sabra07G0066200 Salix brachista HOM05D000357 ORTHO05D000242 5.9e-07 57.8 90 31.1
AT4G14225 Arabidopsis thaliana HOM05D000357 ORTHO05D000242 7.7e-07 57.4 113 30.1
CiPaw.03G040800 Carya illinoinensis HOM05D000357 ORTHO05D000242 7.7e-07 57.4 39 59.0
Manes.01G008701 Manihot esculenta HOM05D000357 ORTHO05D000242 7.7e-07 57.4 115 33.9
Phvul.004G110800 Phaseolus vulgaris HOM05D000357 ORTHO05D000242 7.7e-07 57.4 131 32.1
Sc22g0000460 Simmondsia chinensis HOM05D000357 ORTHO05D000242 7.7e-07 57.4 133 32.3
Aa31LG6G4900 Aethionema arabicum HOM05D000357 ORTHO05D000242 1.0e-06 57.0 123 30.1
COL.COLO4_36501 Corchorus olitorius HOM05D000357 ORTHO05D000242 1.0e-06 57.0 121 36.4
FAN10G3744 Fragaria x ananassa HOM05D000357 ORTHO05D000242 1.0e-06 57.0 148 28.4
Lj1g0000667 Lotus japonicus HOM05D000357 ORTHO05D000242 1.0e-06 57.0 132 33.3
Phvul.004G110900 Phaseolus vulgaris HOM05D000357 ORTHO05D000242 1.0e-06 57.0 124 33.1
BraA02t07590Z Brassica rapa HOM05D000357 ORTHO05D000242 1.3e-06 56.6 149 28.9
CARHR254190 Cardamine hirsuta HOM05D000357 ORTHO05D000242 1.3e-06 56.6 149 28.9
Dinv26387 Davidia involucrata HOM05D000357 ORTHO05D000242 1.7e-06 56.2 36 66.7
Nn2g14936 Nelumbo nucifera HOM05D000357 ORTHO05D000242 1.7e-06 56.2 132 28.0
Nitab4.5_0008468g0010 Nicotiana tabacum HOM05D000357 ORTHO05D000242 1.7e-06 56.2 141 29.8
AT4G12040 Arabidopsis thaliana HOM05D000357 ORTHO05D000242 2.2e-06 55.8 152 27.0
CARHR229850 Cardamine hirsuta HOM05D000357 ORTHO05D000242 2.2e-06 55.8 150 27.3
Thhalv10029014m.g Eutrema salsugineum HOM05D000357 ORTHO05D000242 2.2e-06 55.8 152 27.6
Sabra09G0111800 Salix brachista HOM05D000357 ORTHO05D000242 2.2e-06 55.8 113 31.0
THA.LOC104806353 Tarenaya hassleriana HOM05D000357 ORTHO05D000242 2.2e-06 55.8 145 29.0
TWI15G0597 Tripterygium wilfordii HOM05D000357 ORTHO05D000242 2.9e-06 55.5 143 29.4
TAR623G1789 Trochodendron aralioides HOM05D000357 ORTHO05D000242 2.9e-06 55.5 144 29.2
CARHR012730 Cardamine hirsuta HOM05D000357 ORTHO05D000242 3.8e-06 55.1 144 29.9
ClCG01G003490 Citrullus lanatus HOM05D000357 ORTHO05D000242 3.8e-06 55.1 142 28.9
Ciclev10006551m.g Citrus clementina HOM05D000357 ORTHO05D000242 3.8e-06 55.1 147 27.9
Gohir.A05G081600 Gossypium hirsutum HOM05D000357 ORTHO05D000242 3.8e-06 55.1 142 29.6
Sabra12G0097900 Salix brachista HOM05D000357 ORTHO05D000242 3.8e-06 55.1 141 32.6
COL.COLO4_04119 Corchorus olitorius HOM05D000357 ORTHO05D000242 5.0e-06 54.7 121 33.9
Thhalv10008959m.g Eutrema salsugineum HOM05D000357 ORTHO05D000242 5.0e-06 54.7 143 30.1
Glyma.18G255100 Glycine max HOM05D000357 ORTHO05D000242 5.0e-06 54.7 129 30.2
THA.LOC104813249 Tarenaya hassleriana HOM05D000357 ORTHO05D000242 5.0e-06 54.7 131 28.2
arahy.Tifrunner.gnm1.ann1.WD86IB Arachis hypogaea HOM05D000357 ORTHO05D000242 6.5e-06 54.3 38 63.2
PGR004G2156 Punica granatum HOM05D000357 ORTHO05D000242 6.5e-06 54.3 133 27.1
Sp6g05470 Schrenkiella parvula HOM05D000357 ORTHO05D000242 6.5e-06 54.3 153 28.8
Aa31LG9G10440 Aethionema arabicum HOM05D000357 ORTHO05D000242 8.5e-06 53.9 153 27.5
Migut.F00424 Erythranthe guttata HOM05D000357 ORTHO05D000242 8.5e-06 53.9 148 28.4
Gohir.A12G222300 Gossypium hirsutum HOM05D000357 ORTHO05D000242 8.5e-06 53.9 148 29.1
Manes.08G023800 Manihot esculenta HOM05D000357 ORTHO05D000242 8.5e-06 53.9 133 27.8
SalBow3G2254 Salvia bowleyana HOM05D000357 ORTHO05D000242 8.5e-06 53.9 34 67.6
THA.LOC104813994 Tarenaya hassleriana HOM05D000357 ORTHO05D000242 8.5e-06 53.9 144 28.5


User provided reference genes

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