Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 1.7e-64 249.2 132 100.0
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 4.8e-62 241.1 132 96.2
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 3.8e-59 231.5 130 92.3
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 7.1e-58 227.3 130 90.8
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 2.5e-55 218.8 130 88.5
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 2.5e-55 218.8 130 88.5
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 9.6e-55 216.9 130 88.5
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 2.8e-54 215.3 123 90.2
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.8e-45 186.0 132 74.2
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 7.6e-44 180.6 112 79.5
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 2.2e-43 179.1 129 74.4
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 3.8e-43 178.3 129 69.8
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 3.8e-43 178.3 129 67.4
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 3.8e-43 178.3 129 70.5
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 3.8e-43 178.3 130 70.8
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 1.9e-42 176.0 99 86.9
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.9e-42 176.0 129 70.5
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 2.5e-42 175.6 129 69.8
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 4.2e-42 174.9 129 69.0
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 5.5e-42 174.5 125 72.0
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 5.5e-42 174.5 129 68.2
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 7.1e-42 174.1 129 69.8
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 7.1e-42 174.1 131 66.4
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 9.3e-42 173.7 117 71.8
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 1.2e-41 173.3 129 69.8
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 1.6e-41 172.9 121 73.6
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 1.6e-41 172.9 129 69.8
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.6e-41 172.9 129 68.2
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 1.6e-41 172.9 129 68.2
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 1.6e-41 172.9 107 78.5
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 2.1e-41 172.6 131 72.5
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 3.5e-41 171.8 134 69.4
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 3.5e-41 171.8 112 77.7
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 6.0e-41 171.0 130 67.7
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 7.9e-41 170.6 130 68.5
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.3e-40 169.9 129 69.0
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.3e-40 169.9 112 74.1
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 1.8e-40 169.5 122 67.2
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 3.0e-40 168.7 129 66.7
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 5.1e-40 167.9 131 66.4
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 5.1e-40 167.9 112 75.0
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 5.1e-40 167.9 112 73.2
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 6.7e-40 167.5 124 64.5
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 8.7e-40 167.2 119 72.3
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 8.7e-40 167.2 119 70.6
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.1e-39 166.8 129 68.2
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.1e-39 166.8 113 69.9
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 1.9e-39 166.0 119 72.3
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.9e-39 166.0 117 71.8
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 1.9e-39 166.0 129 65.1
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 2.5e-39 165.6 120 70.0
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 3.3e-39 165.2 143 62.9
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 3.3e-39 165.2 100 78.0
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 3.3e-39 165.2 112 73.2
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 4.3e-39 164.9 117 71.8
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 7.4e-39 164.1 100 79.0
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 7.4e-39 164.1 125 64.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 9.7e-39 163.7 131 64.9
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 9.7e-39 163.7 99 78.8
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 1.3e-38 163.3 157 58.6
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 2.2e-38 162.5 131 64.9
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 2.8e-38 162.2 129 67.4
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 3.7e-38 161.8 125 63.2
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 4.8e-38 161.4 133 65.4
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 6.3e-38 161.0 115 68.7
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 1.1e-37 160.2 128 64.8
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.1e-37 160.2 117 67.5
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 1.4e-37 159.8 130 66.9
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.8e-37 159.5 120 68.3
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 2.4e-37 159.1 121 68.6
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 2.4e-37 159.1 130 62.3
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 2.4e-37 159.1 132 62.1
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 3.1e-37 158.7 106 72.6
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 4.1e-37 158.3 129 65.9
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 4.1e-37 158.3 130 65.4
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 5.3e-37 157.9 129 61.2
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 9.0e-37 157.1 125 60.8
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 9.0e-37 157.1 129 61.2
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 1.2e-36 156.8 119 63.9
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 1.5e-36 156.4 129 66.7
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 1.5e-36 156.4 129 66.7
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 1.5e-36 156.4 129 66.7
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 3.4e-36 155.2 126 63.5
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 3.4e-36 155.2 106 70.8
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 4.5e-36 154.8 127 65.4
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 4.5e-36 154.8 97 74.2
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 4.5e-36 154.8 129 61.2
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 4.5e-36 154.8 107 72.0
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 7.6e-36 154.1 129 62.0
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 3.8e-35 151.8 143 57.3
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 8.5e-35 150.6 125 62.4
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 8.5e-35 150.6 109 64.2
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 2.5e-34 149.1 129 58.9
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 2.5e-34 149.1 111 62.2
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 7.9e-33 144.1 158 51.3
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 3.0e-32 142.1 151 54.3
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 6.7e-32 141.0 124 55.6
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 2.5e-31 139.0 82 82.9
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 4.3e-31 138.3 161 48.4
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 5.7e-31 137.9 100 69.0
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 5.7e-31 137.9 169 49.7
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 7.4e-31 137.5 204 44.6
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.2e-30 136.0 109 74.3
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 1.8e-29 132.9 98 70.4
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 3.1e-29 132.1 115 60.9
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 4.1e-29 131.7 108 67.6
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 2.0e-28 129.4 84 73.8
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 5.9e-28 127.9 104 59.6
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 6.5e-27 124.4 72 80.6
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 8.5e-27 124.0 75 76.0
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.8e-24 116.3 63 90.5
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 6.7e-24 114.4 82 69.5
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 5.7e-23 111.3 64 81.2
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 3.1e-21 105.5 63 77.8
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 4.1e-21 105.1 64 76.6
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 4.1e-21 105.1 64 76.6
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 7.2e-18 94.4 79 63.3
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.6e-17 93.2 104 44.2
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 8.0e-17 90.9 100 40.0
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 2.3e-16 89.4 101 44.6
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 5.2e-16 88.2 100 48.0
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 2.6e-15 85.9 63 68.3
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.3e-14 83.6 57 70.2
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.1e-13 80.5 92 38.0
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 6.1e-09 64.7 65 55.4
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 4.8e-06 55.1 74 44.6


User provided reference genes

Program Settings