Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.6e-109 399.4 197 100.0
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 3.7e-103 378.3 197 93.4
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 8.6e-100 367.1 197 91.4
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 9.5e-99 363.6 195 89.7
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 1.2e-98 363.2 195 89.7
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 3.6e-98 361.7 193 90.7
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 7.3e-91 337.4 196 82.1
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 1.1e-86 323.6 194 80.4
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 8.1e-82 307.4 194 74.2
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 1.4e-81 306.6 190 76.3
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 1.8e-81 306.2 193 76.7
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 4.0e-81 305.1 189 77.2
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 4.0e-81 305.1 192 74.5
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 2.2e-79 299.3 183 78.7
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 6.4e-79 297.7 187 75.4
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 6.4e-79 297.7 193 74.6
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 8.3e-79 297.4 195 71.3
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.4e-78 296.6 187 74.9
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 4.1e-78 295.0 193 71.5
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 7.1e-78 294.3 193 72.5
Psat6g099520 Pisum sativum HOM05D006499 ORTHO05D007874 7.1e-78 294.3 189 74.1
Potri.003G003300 Populus trichocarpa HOM05D006499 ORTHO05D007874 7.1e-78 294.3 190 73.7
Medtr1g038530 Medicago truncatula HOM05D006499 ORTHO05D007874 6.0e-77 291.2 196 71.4
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 7.8e-77 290.8 190 73.7
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 1.3e-76 290.0 194 70.6
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 1.3e-76 290.0 195 71.8
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 1.1e-75 287.0 191 71.2
Ca_05122_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 2.5e-75 285.8 191 71.7
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 4.3e-75 285.0 190 72.1
Medtr1g037830 Medicago truncatula HOM05D006499 ORTHO05D007874 4.3e-75 285.0 196 69.9
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 4.3e-75 285.0 186 74.2
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 4.3e-75 285.0 192 72.4
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 1.6e-74 283.1 199 69.8
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 3.6e-74 282.0 186 73.1
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 1.1e-73 280.4 191 68.6
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 1.4e-73 280.0 190 71.1
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 3.1e-73 278.9 188 72.3
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 8.9e-73 277.3 183 72.1
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 1.5e-72 276.6 188 72.9
Gohir.D02G188400 Gossypium hirsutum HOM05D006499 ORTHO05D007874 2.0e-72 276.2 191 69.6
Gorai.005G211100 Gossypium raimondii HOM05D006499 ORTHO05D007874 2.0e-72 276.2 191 69.6
Aa31LG11G2680 Aethionema arabicum HOM05D006499 ORTHO05D007874 2.6e-72 275.8 196 70.4
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 2.6e-72 275.8 190 69.5
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 4.4e-72 275.0 193 73.1
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 4.4e-72 275.0 167 77.8
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 4.4e-72 275.0 189 69.8
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 7.6e-72 274.2 203 67.0
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 7.6e-72 274.2 177 77.4
Lj6P717T75 Lonicera japonica HOM05D006499 ORTHO05D007874 1.7e-71 273.1 167 77.2
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 1.7e-71 273.1 196 69.4
Gohir.A03G165200 Gossypium hirsutum HOM05D006499 ORTHO05D007874 2.2e-71 272.7 191 69.1
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 2.9e-71 272.3 198 67.2
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 4.9e-71 271.6 191 70.2
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 4.9e-71 271.6 189 68.8
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 6.4e-71 271.2 192 69.8
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 8.4e-71 270.8 192 68.8
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 8.4e-71 270.8 191 68.1
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 1.1e-70 270.4 191 71.2
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 1.9e-70 269.6 192 68.8
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 2.4e-70 269.2 193 71.0
Lalb_Chr10g0094911 Lupinus albus HOM05D006499 ORTHO05D007874 3.2e-70 268.9 185 70.8
CANSAT01G2706 Cannabis sativa HOM05D006499 ORTHO05D007874 9.3e-70 267.3 191 69.6
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 1.6e-69 266.5 187 70.6
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 2.1e-69 266.2 198 64.6
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 2.1e-69 266.2 192 64.6
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 2.7e-69 265.8 195 67.2
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 2.7e-69 265.8 191 69.1
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 4.6e-69 265.0 181 73.5
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 7.8e-69 264.2 192 68.2
EL10Ac9g22960 Beta vulgaris HOM05D006499 ORTHO05D007874 7.8e-69 264.2 202 66.3
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 1.0e-68 263.8 191 69.6
FAN12G4256 Fragaria x ananassa HOM05D006499 ORTHO05D007874 1.3e-68 263.5 192 70.8
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 1.7e-68 263.1 188 69.1
TPR.G29797 Trifolium pratense HOM05D006499 ORTHO05D007874 6.6e-68 261.2 199 66.3
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 8.7e-68 260.8 191 68.6
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 8.7e-68 260.8 191 68.6
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 2.5e-67 259.2 187 67.4
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 3.3e-67 258.8 191 68.1
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 3.3e-67 258.8 191 68.1
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 3.3e-67 258.8 191 69.1
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 3.3e-67 258.8 186 68.8
Duzib132G0405 Durio zibethinus HOM05D006499 ORTHO05D007874 9.0e-65 250.8 188 66.0
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 1.5e-64 250.0 183 65.0
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 5.8e-64 248.1 180 64.4
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 6.4e-63 244.6 194 62.4
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 3.2e-62 242.3 177 68.4
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 3.5e-61 238.8 186 61.8
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 1.5e-59 233.4 193 58.0
COL.COLO4_06169 Corchorus olitorius HOM05D006499 ORTHO05D007874 3.1e-57 225.7 165 67.3
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 2.6e-56 222.6 146 71.2
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 5.1e-52 208.4 182 57.1
CBR_g16977 Chara braunii HOM05D006499 ORTHO05D007874 4.3e-51 205.3 197 53.8
TAR622G0494 Trochodendron aralioides HOM05D006499 ORTHO05D007874 5.6e-51 204.9 149 67.8
GSVIVG01026240001 Vitis vinifera HOM05D006499 ORTHO05D007874 1.6e-50 203.4 187 56.7
CAN.G655.2 Capsicum annuum HOM05D006499 ORTHO05D007874 9.0e-49 197.6 109 83.5
SHI02178 Sapria himalayana HOM05D006499 ORTHO05D007874 4.2e-46 188.7 191 52.4
CAN.G2.1 Capsicum annuum HOM05D006499 ORTHO05D007874 4.6e-37 158.7 85 92.9
SEGI_40434 Sequoiadendron giganteum HOM05D006499 ORTHO05D007874 1.9e-35 153.3 104 67.3
QL04p029592 Quercus lobata HOM05D006499 ORTHO05D007874 1.1e-30 137.5 87 75.9
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 3.3e-27 125.9 77 77.9
arahy.Tifrunner.gnm1.ann1.YHJY2A Arachis hypogaea HOM05D006499 ORTHO05D007874 5.3e-25 118.6 82 72.0
Nn5g28518 Nelumbo nucifera HOM05D006499 ORTHO05D007874 1.0e-20 104.4 92 58.7
A03p62810 Brassica napus HOM05D006499 ORTHO05D007874 3.9e-20 102.4 77 64.9
BraA03t15356Z Brassica rapa HOM05D006499 ORTHO05D007874 3.9e-20 102.4 77 64.9
PGR044G1944 Punica granatum HOM05D006499 ORTHO05D007874 6.7e-20 101.7 158 43.0
Medtr1g037850 Medicago truncatula HOM05D006499 ORTHO05D007874 4.4e-19 99.0 92 54.3
BcaC03g13135 Brassica carinata HOM05D006499 ORTHO05D007874 1.8e-17 93.6 72 63.9
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 8.0e-13 78.2 171 33.3
Cre17.g706800 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 1.0e-12 77.8 179 30.7
Nn6g33750 Nelumbo nucifera HOM05D006499 ORTHO05D007874 2.6e-11 73.2 49 67.3
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 7.4e-11 71.6 172 30.8
Pp3s30_567 Physcomitrium patens HOM05D006499 ORTHO05D007874 9.7e-11 71.2 170 28.8
Cfa021425 Carpinus fangiana HOM05D006499 ORTHO05D007874 2.8e-10 69.7 184 27.2
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 2.8e-10 69.7 159 28.3
Pp3s30_680 Physcomitrium patens HOM05D006499 ORTHO05D007874 3.7e-10 69.3 166 29.5
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 6.3e-10 68.6 172 30.2
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 1.4e-09 67.4 190 26.8
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 1.8e-09 67.0 187 27.3
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 7.0e-09 65.1 168 29.8
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 1.2e-08 64.3 148 29.7
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 2.0e-08 63.5 175 28.0
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 2.0e-08 63.5 175 28.6
Cre06.g305500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 5.0e-07 58.9 147 28.6
MCO13G030 Micromonas commoda HOM05D006499 ORTHO05D007874 5.0e-07 58.9 175 27.4
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.5e-06 57.4 135 31.1


User provided reference genes

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