Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.3e-75 285.4 138 100.0
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 2.2e-65 252.3 138 89.1
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.8e-64 249.2 138 87.7
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 1.3e-62 243.0 137 85.4
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.3e-62 243.0 139 86.3
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 3.8e-62 241.5 139 86.3
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 1.9e-61 239.2 139 84.2
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 8.8e-59 230.3 138 80.4
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.1e-50 203.4 138 71.0
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 2.0e-50 202.6 138 71.7
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 2.0e-50 202.6 137 72.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 2.6e-50 202.2 139 69.8
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 1.7e-49 199.5 136 71.3
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 6.3e-49 197.6 138 68.1
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 4.1e-48 194.9 138 68.1
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 7.0e-48 194.1 138 70.3
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 1.2e-47 193.4 140 69.3
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 1.2e-47 193.4 139 68.3
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 3.5e-47 191.8 138 68.1
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 5.9e-47 191.0 137 67.9
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 5.9e-47 191.0 139 67.6
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 5.9e-47 191.0 139 69.8
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 7.7e-47 190.7 139 67.6
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 7.7e-47 190.7 140 70.0
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 1.7e-46 189.5 138 68.1
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 1.7e-46 189.5 143 60.8
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 1.7e-46 189.5 138 68.1
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 1.7e-46 189.5 137 66.4
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 2.2e-46 189.1 139 68.3
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.9e-46 188.7 139 66.9
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 2.9e-46 188.7 139 68.3
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 5.0e-46 188.0 143 65.7
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 5.0e-46 188.0 142 65.5
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 5.0e-46 188.0 143 65.7
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 6.5e-46 187.6 143 67.1
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 1.1e-45 186.8 139 63.3
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 1.9e-45 186.0 139 66.9
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.9e-45 186.0 139 66.9
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.9e-45 186.0 139 65.5
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 3.2e-45 185.3 142 64.8
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 7.2e-45 184.1 138 63.0
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 7.2e-45 184.1 138 67.4
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 7.2e-45 184.1 140 61.4
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 1.2e-44 183.3 142 63.4
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 1.6e-44 183.0 139 64.0
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 2.1e-44 182.6 142 64.1
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 3.6e-44 181.8 139 63.3
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 8.0e-44 180.6 139 61.9
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 8.0e-44 180.6 169 56.2
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.0e-43 180.3 139 64.7
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 3.0e-43 178.7 137 66.4
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 3.0e-43 178.7 141 61.0
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 8.8e-43 177.2 138 63.8
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.2e-42 176.8 141 63.8
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 2.0e-42 176.0 138 63.8
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 2.0e-42 176.0 141 63.1
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 4.4e-42 174.9 140 60.7
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 5.7e-42 174.5 141 63.1
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 5.7e-42 174.5 138 60.1
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 1.3e-41 173.3 138 65.2
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 2.2e-41 172.6 140 60.7
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 8.3e-41 170.6 143 58.7
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 1.4e-40 169.9 138 58.7
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.8e-40 169.5 138 61.6
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 2.4e-40 169.1 138 58.7
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 4.1e-40 168.3 138 59.4
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 7.0e-40 167.5 138 57.2
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 7.0e-40 167.5 138 58.7
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 9.1e-40 167.2 138 57.2
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 1.2e-39 166.8 138 57.2
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 2.0e-39 166.0 190 49.5
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 2.0e-39 166.0 148 57.4
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 4.5e-39 164.9 138 58.0
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 7.7e-39 164.1 138 58.0
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 1.0e-38 163.7 140 59.3
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.3e-38 163.3 140 59.3
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 1.7e-38 162.9 144 57.6
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 3.8e-38 161.8 138 58.0
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 5.5e-37 157.9 144 54.2
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 9.4e-37 157.1 140 55.7
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 2.7e-36 155.6 140 55.7
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 1.8e-35 152.9 119 62.2
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 5.2e-35 151.4 142 58.5
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 3.6e-28 128.6 130 50.8
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 2.2e-25 119.4 139 46.0
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 2.9e-25 119.0 109 52.3
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 7.8e-23 110.9 134 46.3
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 3.3e-21 105.5 55 85.5
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 4.3e-21 105.1 142 40.8
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 6.8e-19 97.8 136 37.5
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 1.5e-18 96.7 94 57.4
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 3.5e-15 85.5 55 67.3
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 6.0e-15 84.7 79 57.0
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 5.0e-14 81.6 79 55.7
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 2.1e-12 76.3 63 57.1
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 3.1e-11 72.4 59 55.9
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 3.4e-10 68.9 106 38.7
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 3.9e-06 55.5 68 47.1


User provided reference genes

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