Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 3.7e-73 278.1 140 100.0
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 4.3e-37 158.3 152 63.2
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 2.4e-35 152.5 152 59.9
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 3.2e-32 142.1 148 64.2
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 9.3e-32 140.6 142 59.9
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 5.6e-21 104.8 137 47.4
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 3.1e-19 99.0 110 51.8
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 4.0e-19 98.6 106 52.8
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.1e-16 90.5 140 44.3
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 5.5e-16 88.2 139 43.2
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 3.5e-15 85.5 139 41.7
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 4.3e-13 78.6 85 54.1
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 7.4e-13 77.8 136 44.1
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 9.6e-13 77.4 135 43.7
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.8e-12 75.9 104 46.2
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 4.8e-12 75.1 83 53.0
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 4.8e-12 75.1 91 50.5
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 6.3e-12 74.7 78 59.0
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 6.3e-12 74.7 91 50.5
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 1.8e-11 73.2 117 41.9
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 2.4e-11 72.8 105 42.9
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 3.1e-11 72.4 127 44.1
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 4.1e-11 72.0 124 46.0
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 5.3e-11 71.6 130 41.5
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.6e-10 69.3 127 37.8
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 3.4e-10 68.9 81 45.7
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.4e-10 68.9 79 51.9
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 3.4e-10 68.9 75 52.0
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 4.5e-10 68.6 119 42.0
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.9e-10 68.2 111 38.7
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 5.9e-10 68.2 111 38.7
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.0e-09 67.4 123 42.3
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 1.3e-09 67.0 92 43.5
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.2e-09 66.2 93 41.9
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 2.2e-09 66.2 93 41.9
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 2.2e-09 66.2 78 52.6
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 1.1e-08 63.9 81 43.2
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.1e-08 63.9 127 40.9
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.1e-08 63.9 97 43.3
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 1.4e-08 63.5 131 42.0
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.4e-08 63.5 114 42.1
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 1.9e-08 63.2 123 37.4
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.9e-08 63.2 146 38.4
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 3.2e-08 62.4 103 38.8
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 3.2e-08 62.4 108 39.8
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 3.2e-08 62.4 91 46.2
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 3.2e-08 62.4 129 37.2
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 5.5e-08 61.6 109 40.4
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 5.5e-08 61.6 65 50.8
Lalb_Chr22g0361461 Lupinus albus HOM05D013068 ORTHO05D003125 5.5e-08 61.6 97 40.2
SGA_v2.0_scaffold64G21997 Striga asiatica HOM05D003969 ORTHO05D003125 5.5e-08 61.6 49 63.3
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 7.2e-08 61.2 81 46.9
VMungo1215G0564 Vigna mungo HOM05D003969 ORTHO05D003125 9.3e-08 60.8 90 45.6
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 1.2e-07 60.5 89 46.1
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.6e-07 60.1 117 41.9
Glyma.17G105200 Glycine max HOM05D003969 ORTHO05D003125 2.1e-07 59.7 88 44.3
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 2.1e-07 59.7 105 41.9
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 2.7e-07 59.3 122 36.1
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 2.7e-07 59.3 103 42.7
Gohir.D05G012200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 2.7e-07 59.3 128 32.8
Eucgr.L03259 Eucalyptus grandis HOM05D003969 ORTHO05D003125 3.6e-07 58.9 81 42.0
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.6e-07 58.9 117 41.9
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 3.6e-07 58.9 105 45.7
Sed0009487 Sechium edule HOM05D003969 ORTHO05D003125 3.6e-07 58.9 62 51.6
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 4.6e-07 58.5 68 51.5
AT5G35090 Arabidopsis thaliana HOM05D003969 ORTHO05D003125 6.1e-07 58.2 108 38.9
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 6.1e-07 58.2 105 39.0
Carub.0007s3088 Capsella rubella HOM05D003969 ORTHO05D003125 7.9e-07 57.8 136 33.8
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 7.9e-07 57.8 72 43.1
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 7.9e-07 57.8 109 34.9
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 7.9e-07 57.8 87 42.5
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 1.0e-06 57.4 91 39.6
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.0e-06 57.4 70 45.7
Glyma.17G215400 Glycine max HOM05D013068 ORTHO05D003125 1.0e-06 57.4 99 42.4
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.0e-06 57.4 101 36.6
AL7G43940 Arabidopsis lyrata HOM05D003969 ORTHO05D003125 1.3e-06 57.0 116 36.2
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 1.3e-06 57.0 132 37.1
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 1.3e-06 57.0 66 53.0
Lj5g0018030 Lotus japonicus HOM05D013068 ORTHO05D003125 1.3e-06 57.0 84 44.0
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 1.8e-06 56.6 83 42.2
MELO3C016989.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.8e-06 56.6 66 47.0
Eucgr.C01695 Eucalyptus grandis HOM05D003969 ORTHO05D003125 2.3e-06 56.2 83 41.0
Glyma.13G157500 Glycine max HOM05D003969 ORTHO05D003125 2.3e-06 56.2 87 43.7
Solyc12g010430.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 2.3e-06 56.2 86 39.5
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 2.3e-06 56.2 87 40.2
HPP92_023807 Vanilla planifolia HOM05D003969 ORTHO05D003125 2.3e-06 56.2 63 41.3
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 3.0e-06 55.8 133 38.3
CAN.G551.21 Capsicum annuum HOM05D003969 ORTHO05D003125 3.9e-06 55.5 83 42.2
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 3.9e-06 55.5 116 37.9
Duzib168G2018 Durio zibethinus HOM05D003969 ORTHO05D003125 3.9e-06 55.5 121 33.1
Thecc.09G019700 Theobroma cacao HOM05D003969 ORTHO05D003125 5.1e-06 55.1 74 45.9
TPR.G38870 Trifolium pratense HOM05D013068 ORTHO05D003125 5.1e-06 55.1 87 43.7
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 5.1e-06 55.1 79 40.5
Aqoxy7G00610 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 6.7e-06 54.7 65 46.2
Lalb_Chr13g0301201 Lupinus albus HOM05D003969 ORTHO05D003125 6.7e-06 54.7 67 49.3
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 6.7e-06 54.7 121 38.8
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 6.7e-06 54.7 114 40.4
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 6.7e-06 54.7 76 42.1
Atru.chr7.265 Acer truncatum HOM05D003969 ORTHO05D003125 8.7e-06 54.3 73 47.9
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 8.7e-06 54.3 88 40.9


User provided reference genes

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