Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 0.0e+00 1100.1 544 100.0
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 4.2e-290 1000.7 544 91.5
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 1.1e-258 896.3 547 82.6
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 1.7e-254 882.5 546 81.0
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.1e-253 879.8 542 81.9
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 7.0e-253 877.1 548 81.2
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 7.0e-253 877.1 542 81.5
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 1.7e-185 653.3 569 60.8
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 3.1e-176 622.5 563 58.8
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 7.0e-176 621.3 540 59.8
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 7.0e-176 621.3 545 59.3
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 1.9e-173 613.2 535 60.0
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 4.0e-171 605.5 496 60.1
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 5.2e-171 605.1 539 57.0
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 2.2e-169 599.7 482 63.3
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 4.1e-168 595.5 435 64.6
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 2.7e-167 592.8 525 57.5
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 3.8e-166 589.0 545 55.8
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 1.1e-165 587.4 561 55.4
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 2.5e-165 586.3 550 56.4
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 3.2e-165 585.9 549 54.3
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 6.1e-164 581.6 541 57.1
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 2.6e-162 576.2 486 59.7
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 3.7e-161 572.4 528 56.2
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 3.1e-160 569.3 493 57.4
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 3.1e-160 569.3 493 57.6
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 9.1e-160 567.8 476 59.5
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 9.1e-160 567.8 543 55.2
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 1.6e-159 567.0 545 53.9
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 5.9e-159 565.1 425 62.6
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 5.9e-159 565.1 425 62.8
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 1.7e-158 563.5 485 56.9
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 5.0e-158 562.0 425 62.6
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 6.6e-158 561.6 423 63.6
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 6.6e-158 561.6 431 62.4
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 8.6e-158 561.2 484 57.0
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 1.5e-157 560.5 481 58.0
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 2.5e-157 559.7 437 60.9
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 2.5e-157 559.7 478 57.3
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 3.3e-157 559.3 484 57.4
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 4.2e-157 558.9 467 57.2
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 3.0e-155 552.7 425 62.1
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 4.0e-155 552.4 474 57.0
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 4.0e-155 552.4 526 53.8
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 5.2e-155 552.0 517 55.9
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 6.8e-155 551.6 473 57.5
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 1.5e-154 550.4 538 54.5
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 2.0e-154 550.1 493 56.6
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 2.0e-154 550.1 495 56.4
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 2.6e-154 549.7 475 58.5
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 3.4e-154 549.3 549 52.8
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 4.4e-154 548.9 484 56.4
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 8.3e-153 544.7 427 61.6
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 2.4e-152 543.1 407 62.7
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 5.4e-152 542.0 455 58.7
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 7.0e-152 541.6 422 61.6
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 1.2e-151 540.8 471 56.7
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 2.9e-150 536.2 469 56.5
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 8.6e-150 534.6 462 56.1
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 1.1e-149 534.3 539 51.9
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 2.5e-149 533.1 435 59.5
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 4.3e-149 532.3 506 53.0
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 7.3e-149 531.6 488 55.1
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 1.2e-148 530.8 518 52.3
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 1.8e-147 526.9 489 54.8
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 5.2e-147 525.4 436 58.9
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.2e-146 524.2 485 54.4
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 2.0e-146 523.5 514 52.7
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 1.7e-145 520.4 495 53.7
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 1.7e-145 520.4 406 60.1
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 6.4e-145 518.5 507 53.5
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 2.4e-144 516.5 496 52.6
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 7.0e-144 515.0 391 62.7
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 3.5e-143 512.7 479 56.4
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.1e-141 507.7 532 49.8
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 1.1e-139 501.1 491 52.5
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 3.1e-139 499.6 589 46.7
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 4.0e-139 499.2 482 54.1
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 5.2e-139 498.8 493 52.9
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 7.5e-138 495.0 491 52.5
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 1.7e-134 483.8 460 55.0
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 6.0e-127 458.8 363 58.7
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 2.5e-117 426.8 302 69.2
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 1.4e-112 411.0 393 50.1
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 2.4e-112 410.2 400 49.8
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 4.2e-112 409.5 461 44.7
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 3.5e-111 406.4 298 65.1
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 4.6e-111 406.0 297 66.0
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 8.7e-110 401.7 300 64.0
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 5.3e-107 392.5 448 46.7
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 2.6e-98 363.6 573 40.7
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 4.9e-97 359.4 306 59.5
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 3.9e-94 349.7 292 58.9
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 3.4e-90 336.7 267 65.2
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 5.8e-90 335.9 481 38.7
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 6.5e-89 332.4 569 36.0
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 6.1e-87 325.9 341 47.5
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 2.3e-86 323.9 341 47.8
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 7.4e-85 318.9 235 66.0
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 2.6e-82 310.5 227 66.5
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 1.1e-80 305.1 237 61.6
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 2.7e-79 300.4 250 63.2
CSS0050204 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.7e-60 238.0 168 64.9
CANSAT11G2102 Cannabis sativa HOM05D006592 ORTHO05D008122 2.4e-59 234.2 271 43.9
Sed0001244 Sechium edule HOM05D006592 ORTHO05D008122 4.5e-58 229.9 478 31.6
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 1.5e-56 224.9 324 38.0
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 8.3e-44 182.6 310 32.9
Cpa.g.sc137.28 Carica papaya HOM05D006592 ORTHO05D008122 2.7e-42 177.6 184 50.0
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 6.8e-38 162.9 110 72.7
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 8.9e-38 162.5 404 30.7
Glyma.16G106700 Glycine max HOM05D006592 ORTHO05D008122 1.2e-37 162.2 199 43.7
Lj4g0015969 Lotus japonicus HOM05D006592 ORTHO05D008122 1.2e-37 162.2 224 39.7
Psat4g134920 Pisum sativum HOM05D006592 ORTHO05D008122 9.2e-35 152.5 183 43.7
Sc01g0005990 Simmondsia chinensis HOM05D006592 ORTHO05D008122 9.2e-35 152.5 240 38.8
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 9.5e-32 142.5 107 68.2
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 4.7e-31 140.2 283 31.8
MBI02_g32478_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.7e-26 124.4 91 69.2
SEGI_06764 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 1.5e-24 118.6 134 45.5
Zm00001eb071790 Zea mays HOM05D006592 ORTHO05D008122 2.0e-21 108.2 202 36.6
Ciclev10004057m.g Citrus clementina HOM05D006592 ORTHO05D008122 1.9e-19 101.7 98 50.0
Dinv37458 Davidia involucrata HOM05D000040 ORTHO05D000267 5.6e-16 90.1 66 74.2
COL.COLO4_04363 Corchorus olitorius HOM05D003801 ORTHO05D008122 6.8e-14 83.2 63 58.7
Hma1.2p1_1046F.1_g251530 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.5e-10 70.9 117 37.6
C08p16710 Brassica napus HOM05D006592 ORTHO05D008122 1.4e-06 58.9 42 57.1
SEGI_04489 Sequoiadendron giganteum HOM05D006592 ORTHO05D008122 4.0e-06 57.4 45 55.6


User provided reference genes

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